FFCP PHASE1:Hg19::chr10:111768654..111768687,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000542!8.93e-27!53;CL:0000051!8.93e-27!53;CL:0000838!2.64e-26!52;CL:0000738!3.97e-20!140;CL:0002087!1.92e-19!119;CL:0000037!1.90e-18!172;CL:0000566!1.90e-18!172;CL:0000988!1.97e-17!182;CL:0002032!1.10e-16!165;CL:0000837!1.10e-16!165;CL:0002031!1.20e-16!124;CL:0000084!2.06e-14!25;CL:0000827!2.06e-14!25;CL:0000791!1.03e-13!18;CL:0000789!1.03e-13!18;CL:0002420!1.03e-13!18;CL:0002419!1.03e-13!18;CL:0000790!1.03e-13!18;CL:0000945!3.19e-11!24;CL:0000826!3.19e-11!24;CL:0000625!5.42e-09!11;CL:0000236!3.32e-07!14 | |ontology_enrichment_celltype=CL:0000542!8.93e-27!53;CL:0000051!8.93e-27!53;CL:0000838!2.64e-26!52;CL:0000738!3.97e-20!140;CL:0002087!1.92e-19!119;CL:0000037!1.90e-18!172;CL:0000566!1.90e-18!172;CL:0000988!1.97e-17!182;CL:0002032!1.10e-16!165;CL:0000837!1.10e-16!165;CL:0002031!1.20e-16!124;CL:0000084!2.06e-14!25;CL:0000827!2.06e-14!25;CL:0000791!1.03e-13!18;CL:0000789!1.03e-13!18;CL:0002420!1.03e-13!18;CL:0002419!1.03e-13!18;CL:0000790!1.03e-13!18;CL:0000945!3.19e-11!24;CL:0000826!3.19e-11!24;CL:0000625!5.42e-09!11;CL:0000236!3.32e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000084;7.31e-30;25!CL:0000791;5.13e-28;18!CL:0000789;5.13e-28;18!CL:0002419;5.13e-28;18!CL:0000542;1.08e-27;53!CL:0000625;1.02e-17;11!CL:0000945;1.08e-15;24!CL:0000236;6.99e-11;13!CL:0000624;1.14e-10;6!CL:0000094;2.89e-08;8!CL:0002087;5.62e-08;104 | |ontology_enrichment_celltype_v019=CL:0000084;7.31e-30;25!CL:0000791;5.13e-28;18!CL:0000789;5.13e-28;18!CL:0002419;5.13e-28;18!CL:0000542;1.08e-27;53!CL:0000625;1.02e-17;11!CL:0000945;1.08e-15;24!CL:0000236;6.99e-11;13!CL:0000624;1.14e-10;6!CL:0000094;2.89e-08;8!CL:0002087;5.62e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.74e-49,53;CL:0000051,2.74e-49,53;CL:0000838,2.90e-48,52;CL:0000084,7.98e-30,25;CL:0000827,7.98e-30,25;CL:0000738,4.23e-29,136;CL:0000791,5.25e-28,18;CL:0000789,5.25e-28,18;CL:0002420,5.25e-28,18;CL:0002419,5.25e-28,18;CL:0000790,5.25e-28,18;CL:0002087,3.54e-26,115;CL:0000037,1.06e-21,168;CL:0002031,1.19e-20,120;CL:0000988,1.95e-20,177;CL:0002032,1.77e-19,161;CL:0000837,1.77e-19,161;CL:0000625,1.03e-17,11;CL:0000945,4.73e-16,24;CL:0000826,4.73e-16,24;CL:0000624,1.15e-10,6;CL:0000236,2.80e-10,14;CL:0000094,3.33e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000790;5.13e-28;18!CL:0000051;1.08e-27;53 | |ontology_enrichment_development_v019=CL:0000790;5.13e-28;18!CL:0000051;1.08e-27;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.45e-10!15;UBERON:0000179!4.45e-10!15;UBERON:0000463!4.45e-10!15 | |ontology_enrichment_uberon=UBERON:0000178!4.45e-10!15;UBERON:0000179!4.45e-10!15;UBERON:0000463!4.45e-10!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.55e-16;15!UBERON:0000179;3.55e-16;15!UBERON:0000463;3.55e-16;15!UBERON:0002390;3.55e-09;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.55e-16;15!UBERON:0000179;3.55e-16;15!UBERON:0000463;3.55e-16;15!UBERON:0002390;3.55e-09;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.17e-16,15;UBERON:0000179,3.17e-16,15;UBERON:0000463,3.17e-16,15;UBERON:0002370,7.60e-07,4;UBERON:0005058,7.60e-07,4;UBERON:0009113,7.60e-07,4;UBERON:0003295,7.60e-07,4;UBERON:0005562,7.60e-07,4 | |||
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| ||
|short_description=p@chr10:111768654..111768687,+ | |short_description=p@chr10:111768654..111768687,+ | ||
}} | }} |
Revision as of 02:15, 16 November 2012
Short description: | p@chr10:111768654..111768687, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:111768654..111768687, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.74e-49 | 53 |
common lymphoid progenitor | 2.74e-49 | 53 |
lymphoid lineage restricted progenitor cell | 2.90e-48 | 52 |
T cell | 7.98e-30 | 25 |
pro-T cell | 7.98e-30 | 25 |
leukocyte | 4.23e-29 | 136 |
mature alpha-beta T cell | 5.25e-28 | 18 |
alpha-beta T cell | 5.25e-28 | 18 |
immature T cell | 5.25e-28 | 18 |
mature T cell | 5.25e-28 | 18 |
immature alpha-beta T cell | 5.25e-28 | 18 |
nongranular leukocyte | 3.54e-26 | 115 |
hematopoietic stem cell | 1.06e-21 | 168 |
hematopoietic lineage restricted progenitor cell | 1.19e-20 | 120 |
hematopoietic cell | 1.95e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.77e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-19 | 161 |
CD8-positive, alpha-beta T cell | 1.03e-17 | 11 |
lymphocyte of B lineage | 4.73e-16 | 24 |
pro-B cell | 4.73e-16 | 24 |
CD4-positive, alpha-beta T cell | 1.15e-10 | 6 |
B cell | 2.80e-10 | 14 |
granulocyte | 3.33e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 3.17e-16 | 15 |
haemolymphatic fluid | 3.17e-16 | 15 |
organism substance | 3.17e-16 | 15 |
thymus | 7.60e-07 | 4 |
hemolymphoid system gland | 7.60e-07 | 4 |
thymic region | 7.60e-07 | 4 |
pharyngeal gland | 7.60e-07 | 4 |
thymus primordium | 7.60e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.