FFCP PHASE1:Hg19::chr14:106586656..106586668,-: Difference between revisions
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|ontology_enrichment_celltype_v019=CL:0000236;4.36e-32;13!CL:0000945;2.82e-22;24!CL:0000946;2.84e-10;1!CL:0000786;2.84e-10;1!CL:0000542;2.16e-08;53 | |ontology_enrichment_celltype_v019=CL:0000236;4.36e-32;13!CL:0000945;2.82e-22;24!CL:0000946;2.84e-10;1!CL:0000786;2.84e-10;1!CL:0000542;2.16e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.55e-39,14;CL:0000945,2.09e-22,24;CL:0000826,2.09e-22,24;CL:0000946,2.84e-10,1;CL:0000786,2.84e-10,1;CL:0000980,2.84e-10,1;CL:0000838,8.49e-10,52;CL:0000542,1.36e-09,53;CL:0000051,1.36e-09,53 | |||
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|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@IGHV3-13 | |short_description=p1@IGHV3-13 | ||
}} | }} |
Revision as of 06:31, 16 November 2012
Short description: | p1@IGHV3-13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_IGHV3-13_5end |
Coexpression cluster: | C218_tonsil_lymph_CD19_spleen_colon_appendix_salivary |
Association with transcript: | 0bp_to_ENST00000390602_5end |
EntrezGene: | NA |
HGNC: | 5581 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.55e-39 | 14 |
lymphocyte of B lineage | 2.09e-22 | 24 |
pro-B cell | 2.09e-22 | 24 |
antibody secreting cell | 2.84e-10 | 1 |
plasma cell | 2.84e-10 | 1 |
plasmablast | 2.84e-10 | 1 |
lymphoid lineage restricted progenitor cell | 8.49e-10 | 52 |
lymphocyte | 1.36e-09 | 53 |
common lymphoid progenitor | 1.36e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 6.35e-18 | 2 |
adult organism | 1.71e-14 | 114 |
lymph node | 1.65e-10 | 1 |
tonsil | 1.80e-10 | 1 |
mucosa-associated lymphoid tissue | 1.80e-10 | 1 |
lymphoid tissue | 1.80e-10 | 1 |
tonsillar ring | 1.80e-10 | 1 |
vermiform appendix | 4.06e-10 | 1 |
caecum | 4.06e-10 | 1 |
midgut | 4.06e-10 | 1 |
submandibular gland | 5.30e-10 | 1 |
submandibular gland primordium | 5.30e-10 | 1 |
lower lobe of right lung | 8.24e-10 | 1 |
right lung lobe | 8.24e-10 | 1 |
lower lobe of lung | 8.24e-10 | 1 |
lobe of lung | 8.24e-10 | 1 |
right lung | 8.24e-10 | 1 |
dura mater | 1.07e-09 | 1 |
future meninx | 1.07e-09 | 1 |
ectomeninx | 1.07e-09 | 1 |
future dura mater | 1.07e-09 | 1 |
parotid gland | 1.17e-09 | 1 |
cheek | 1.17e-09 | 1 |
parotid gland primordium | 1.17e-09 | 1 |
colon | 2.42e-09 | 9 |
gastrointestinal system | 2.23e-08 | 25 |
intestine | 4.74e-08 | 17 |
large intestine | 9.91e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.