FFCP PHASE1:Hg19::chr15:89450494..89450525,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!4.95e-19!180;CL:0000057!4.94e-11!75;CL:0000499!2.85e-07!27;CL:0000325!5.54e-07!39;CL:0002620!8.61e-07!23 | |ontology_enrichment_celltype=CL:0000055!4.95e-19!180;CL:0000057!4.94e-11!75;CL:0000499!2.85e-07!27;CL:0000325!5.54e-07!39;CL:0002620!8.61e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.21e-15;13!CL:0002334;1.52e-09;12!CL:0002615;3.78e-09;3!CL:0002567;7.70e-09;3!CL:0002579;1.22e-08;3!CL:0002521;2.70e-08;3!CL:0000499;3.65e-08;28!CL:0000135;6.72e-08;3!CL:0002580;6.72e-08;3!CL:0000388;6.72e-08;3 | |ontology_enrichment_celltype_v019=CL:0000136;2.21e-15;13!CL:0002334;1.52e-09;12!CL:0002615;3.78e-09;3!CL:0002567;7.70e-09;3!CL:0002579;1.22e-08;3!CL:0002521;2.70e-08;3!CL:0000499;3.65e-08;28!CL:0000135;6.72e-08;3!CL:0002580;6.72e-08;3!CL:0000388;6.72e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.04e-16,15;CL:0002334,1.43e-09,12;CL:0002615,3.80e-09,3;CL:0002567,8.04e-09,3;CL:0002579,1.30e-08,3;CL:0002521,2.20e-08,3;CL:0000499,3.20e-08,28;CL:0002580,5.85e-08,3;CL:0000135,8.37e-08,3;CL:0000388,8.37e-08,3;CL:0000057,2.18e-07,76;CL:0000153,8.92e-07,9;CL:0000447,8.92e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.82e-08;3!DOID:127;1.82e-08;3 | |ontology_enrichment_disease_v019=DOID:0060084;1.82e-08;3!DOID:127;1.82e-08;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.51e-08,3;DOID:127,1.51e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0005156!4.34e-07!59;UBERON:0000990!4.34e-07!59 | |ontology_enrichment_uberon=UBERON:0005156!4.34e-07!59;UBERON:0000990!4.34e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.45e-17;9!UBERON:0000042;2.45e-17;9!UBERON:0003688;4.31e-16;6!UBERON:0002358;4.31e-16;6!UBERON:0003684;4.31e-16;6!UBERON:0001178;4.31e-16;6!UBERON:0002190;2.70e-08;3!UBERON:0001013;3.84e-08;14!UBERON:0007846;6.72e-08;3!UBERON:0000043;6.72e-08;3!UBERON:0007845;6.72e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0004457;2.45e-17;9!UBERON:0000042;2.45e-17;9!UBERON:0003688;4.31e-16;6!UBERON:0002358;4.31e-16;6!UBERON:0003684;4.31e-16;6!UBERON:0001178;4.31e-16;6!UBERON:0002190;2.70e-08;3!UBERON:0001013;3.84e-08;14!UBERON:0007846;6.72e-08;3!UBERON:0000043;6.72e-08;3!UBERON:0007845;6.72e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.65e-16,6;UBERON:0002358,4.65e-16,6;UBERON:0003684,4.65e-16,6;UBERON:0001178,4.65e-16,6;UBERON:0004457,9.38e-13,12;UBERON:0000042,9.38e-13,12;UBERON:0002190,2.20e-08,3;UBERON:0001013,4.20e-08,14;UBERON:0007846,8.37e-08,3;UBERON:0000043,8.37e-08,3;UBERON:0007845,8.37e-08,3 | |||
|phase1_expression=7.44881355009282,6.85121676451146,7.18867460889453,5.00366491765652,18.3254048715188,8.72338524100369,2.53299878168311,4.42203911398782,2.87304191019822,0,0,0.436882744260345,0.527533956456907,0.123766352960047,0.662794751455832,0,1.80808358407193,0,0,0.246242116153576,0,0.313454721478088,0.286235987131057,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,1.34140171940727,0,0.361439152384566,12.0321098552613,2.31754430337318,0,3.89307896242109,0.0945348171640679,0.665188192387692,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,0.264818361626438,0.860509862246441,0.354668382198357,0.560677600142307,0,0.49333509683432,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0,0,0.161872944368132,0,0,0,0.413303124703062,0,2.22540236350701,0,0.718618141816238,0,0.125118519871964,0,0,1.83892677479412,1.50238058906597,0.340296549480063,1.25572744982203,1.70845911054854,0.211931901159562,0.300091096084402,0.618315175430633,0.515281080091258,2.79175284497385,0.506328996723799,0.68205903612839,0.504867548488229,0.736399189138395,0.646584227275248,1.77504796258307,2.01504196455281,1.01736355386293,0.193260853163297,0,0,0.243947412259191,0.662648841607426,0.69716365721711,0.414644220061482,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0.196221465125346,0,0.738155454624648,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0.234817388471643,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0.671928512795438,0,0,0.290633938513962,0,0,0,0,0,0.37872730027914,0.126995788584338,4.20187268114105,7.03304683260282,3.4214489204541,0.102827492703324,1.20137223137567,0.285826432630578,0,0,0.07333828582095,0.387815147273333,10.7296933755565,0,0,1.04007436911366,0.514414748524284,0,0.532844358032199,0.714889968290738,4.88359444852299,0,0.325736184293735,0.710783897485092,1.58390374586686,0,2.61460037580088,0.599837947092342,0,0,0,0.718874566474748,2.29723871668228,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0.500170521059677,0.271265023699736,0.207970861530807,0.535286966391485,0.157702415033935,0.585707074963566,8.12554469264841,6.82222512167955,2.0694614258501,0,0,0.347534457872331,1.56640925970192,0.343143423810856,0,0,0,0,0,0,3.72161711728165,1.38115775959256,2.80660094433074,3.20347873139252,3.58195074346692,4.02134802859019,4.45254199334973,0.308419387605311,0.355123450626254,0.164254312027618,0.519254429183621,0,0.725156697549733,3.00759705454927,0.368323955743585,0.574072240823034,0.364182336013434,3.67148361886388,0.451199612907412,0.15403067420883,0,0,0.211103257785751,0,0,0,3.08454505380579,0.270946437543853,1.50506932156456,0.254876273045038,0,0.671624264166535,0,0,0.512900250232778,1.96808787419823,0.650756789328606,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0.322260734604821,0.290033387828457,0.170453254832202,0.178064071293475,0.991709492165869,0.192190067365106,0,0.10115778085555,0,2.83331112147576,0,0.308033580176089,0,0,0.18532421910392,0,0,0.316379424718726,1.33441135746677,0.767693373934002,0,0.318203247925937,0,0.179872457583315,1.37268514868027,0.353437207037059,0.202182481573316,1.58510321173008,0,0.975267478179181,0.731140468893853,0,1.36499911407986,1.27264888758341,0,0,0.66343897524122,0.438450885253763,1.73632660280006,0,0.202910376962704,0.30982349809975,0,0,0.294747123039363,0.35667105148125,0.354761064070598,1.89996871767898,1.64647446479951,0,0,0,0,0,0.0941438007767792,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0.47748896947538,0,0,0,0,0.333926115068718,0,0.211125408127993,3.98495976502139,0.276283915531148,0,0.102268682502155,0,3.11039587661807,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0.335643173951685,0,0,0.210998064528027,0,0,0,0,0.353830258013357,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,2.08271686002157,0,0,0.698906672968121,0,0,0,0,0.872901148395775,0,0.451961481561065,0.137041924646751,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0.279282401272254,0.458320848023367,1.43574604915363,1.397753003492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| ||
|short_description=p@chr15:89450494..89450525,- | |short_description=p@chr15:89450494..89450525,- | ||
}} | }} |
Revision as of 06:32, 16 November 2012
Short description: | p@chr15:89450494..89450525, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:89450494..89450525, - |
Coexpression cluster: | C568_Mesenchymal_Fibroblast_Adipocyte_Preadipocyte_Chondrocyte_aorta_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.04e-16 | 15 |
preadipocyte | 1.43e-09 | 12 |
adipocyte of omentum tissue | 3.80e-09 | 3 |
light melanocyte | 8.04e-09 | 3 |
omentum preadipocyte | 1.30e-08 | 3 |
subcutaneous fat cell | 2.20e-08 | 3 |
stromal cell | 3.20e-08 | 28 |
preadipocyte of the breast | 5.85e-08 | 3 |
fibrocyte | 8.37e-08 | 3 |
tendon cell | 8.37e-08 | 3 |
fibroblast | 2.18e-07 | 76 |
GAG secreting cell | 8.92e-07 | 9 |
carbohydrate secreting cell | 8.92e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.65e-16 | 6 |
peritoneum | 4.65e-16 | 6 |
abdominal cavity | 4.65e-16 | 6 |
visceral peritoneum | 4.65e-16 | 6 |
cavity lining | 9.38e-13 | 12 |
serous membrane | 9.38e-13 | 12 |
subcutaneous adipose tissue | 2.20e-08 | 3 |
adipose tissue | 4.20e-08 | 14 |
dense regular connective tissue | 8.37e-08 | 3 |
tendon | 8.37e-08 | 3 |
regular connective tissue | 8.37e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.51e-08 | 3 |
leiomyoma | 1.51e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.