FFCP PHASE1:Hg19::chr16:90015139..90015208,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000222!1.02e-26!119;CL:0000220!5.17e-24!246;CL:0002321!9.85e-24!248;CL:0002371!3.61e-22!591;CL:0000055!1.19e-21!180;CL:0000183!3.12e-21!59;CL:0000144!3.30e-20!625;CL:0000192!2.50e-19!42;CL:0000514!2.50e-19!42;CL:0000187!1.23e-18!54;CL:0000680!1.86e-18!57;CL:0000056!1.86e-18!57;CL:0000355!1.86e-18!57;CL:0000548!1.41e-17!679;CL:0000004!1.41e-17!679;CL:0000255!1.41e-17!679;CL:0000393!9.11e-17!60;CL:0000211!9.11e-17!60;CL:0000012!1.20e-16!682;CL:0000359!2.85e-16!32;CL:0002078!1.87e-11!44;CL:0000003!3.50e-11!722;CL:0000115!4.10e-10!35;CL:0002139!1.28e-08!24;CL:0000071!1.83e-08!18;CL:0002546!1.83e-08!18;CL:0000213!2.11e-08!57;CL:0000215!2.11e-08!57;CL:1000449!1.63e-07!16 | |ontology_enrichment_celltype=CL:0000222!1.02e-26!119;CL:0000220!5.17e-24!246;CL:0002321!9.85e-24!248;CL:0002371!3.61e-22!591;CL:0000055!1.19e-21!180;CL:0000183!3.12e-21!59;CL:0000144!3.30e-20!625;CL:0000192!2.50e-19!42;CL:0000514!2.50e-19!42;CL:0000187!1.23e-18!54;CL:0000680!1.86e-18!57;CL:0000056!1.86e-18!57;CL:0000355!1.86e-18!57;CL:0000548!1.41e-17!679;CL:0000004!1.41e-17!679;CL:0000255!1.41e-17!679;CL:0000393!9.11e-17!60;CL:0000211!9.11e-17!60;CL:0000012!1.20e-16!682;CL:0000359!2.85e-16!32;CL:0002078!1.87e-11!44;CL:0000003!3.50e-11!722;CL:0000115!4.10e-10!35;CL:0002139!1.28e-08!24;CL:0000071!1.83e-08!18;CL:0002546!1.83e-08!18;CL:0000213!2.11e-08!57;CL:0000215!2.11e-08!57;CL:1000449!1.63e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.25e-15;32!CL:0000192;8.85e-14;43!CL:0000187;1.93e-10;55!CL:0000115;4.48e-09;36!CL:0002139;1.57e-08;24!CL:0000071;1.95e-08;18!CL:0000393;2.29e-08;61!CL:0000211;2.29e-08;61!CL:0002078;2.63e-08;45!CL:1000449;1.22e-07;15!CL:0002681;7.84e-07;12!CL:0002584;7.84e-07;12 | |ontology_enrichment_celltype_v019=CL:0000359;2.25e-15;32!CL:0000192;8.85e-14;43!CL:0000187;1.93e-10;55!CL:0000115;4.48e-09;36!CL:0002139;1.57e-08;24!CL:0000071;1.95e-08;18!CL:0000393;2.29e-08;61!CL:0000211;2.29e-08;61!CL:0002078;2.63e-08;45!CL:1000449;1.22e-07;15!CL:0002681;7.84e-07;12!CL:0002584;7.84e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.29e-27,121;CL:0002321,2.43e-24,250;CL:0000192,2.89e-19,43;CL:0000514,2.89e-19,43;CL:0000187,1.23e-18,55;CL:0000680,1.83e-18,58;CL:0000056,1.83e-18,58;CL:0000355,1.83e-18,58;CL:0000393,8.56e-17,61;CL:0000211,8.56e-17,61;CL:0000359,2.85e-16,32;CL:0002078,5.37e-12,45;CL:0000115,1.16e-10,36;CL:0000213,7.52e-09,58;CL:0000215,7.52e-09,58;CL:0002139,1.28e-08,24;CL:0000071,1.83e-08,18;CL:0002546,1.83e-08,18;CL:1000449,1.42e-07,15;CL:0002681,8.31e-07,12;CL:0002584,8.31e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;8.85e-14;43!CL:0000355;1.01e-09;58!CL:0002546;1.95e-08;18!CL:0000222;3.02e-08;121 | |ontology_enrichment_development_v019=CL:0000514;8.85e-14;43!CL:0000355;1.01e-09;58!CL:0002546;1.95e-08;18!CL:0000222;3.02e-08;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!8.03e-22!79;UBERON:0007798!8.03e-22!79;UBERON:0000914!1.24e-20!83;UBERON:0002329!1.24e-20!83;UBERON:0003077!1.24e-20!83;UBERON:0003059!1.24e-20!83;UBERON:0007282!1.24e-20!83;UBERON:0009618!1.24e-20!83;UBERON:0007285!1.24e-20!83;UBERON:0000119!3.78e-19!312;UBERON:0005256!5.84e-19!143;UBERON:0000486!6.03e-19!82;UBERON:0000055!6.62e-19!69;UBERON:0003914!9.88e-19!118;UBERON:0000483!1.57e-18!309;UBERON:0001981!2.76e-18!60;UBERON:0007500!2.76e-18!60;UBERON:0004537!2.76e-18!60;UBERON:0006965!2.76e-18!60;UBERON:0004290!6.18e-18!70;UBERON:0004872!2.77e-17!84;UBERON:0001637!3.94e-16!42;UBERON:0003509!3.94e-16!42;UBERON:0004572!3.94e-16!42;UBERON:0004535!4.44e-16!110;UBERON:0001009!9.08e-16!113;UBERON:0001134!3.43e-15!61;UBERON:0002036!3.43e-15!61;UBERON:0003082!3.43e-15!61;UBERON:0000490!2.69e-14!138;UBERON:0002385!6.24e-14!63;UBERON:0001015!6.24e-14!63;UBERON:0000383!6.24e-14!63;UBERON:0004111!4.38e-13!241;UBERON:0002100!5.27e-13!216;UBERON:0000025!5.84e-13!194;UBERON:0000475!9.45e-13!365;UBERON:0000477!1.23e-12!286;UBERON:0004573!1.05e-11!33;UBERON:0004571!1.05e-11!33;UBERON:0000481!2.56e-11!347;UBERON:0000468!1.67e-10!659;UBERON:0000923!1.79e-10!604;UBERON:0005291!1.79e-10!604;UBERON:0006598!1.79e-10!604;UBERON:0002532!1.79e-10!604;UBERON:0000467!2.56e-10!625;UBERON:0002050!3.12e-10!605;UBERON:0005423!3.12e-10!605;UBERON:0000480!3.40e-10!626;UBERON:0000922!8.68e-10!612;UBERON:0003104!1.09e-09!238;UBERON:0009142!1.09e-09!238;UBERON:0000926!3.86e-09!448;UBERON:0004120!3.86e-09!448;UBERON:0006603!3.86e-09!448;UBERON:0001986!1.83e-08!18;UBERON:0004638!1.83e-08!18;UBERON:0004852!1.83e-08!18;UBERON:0004211!1.63e-07!16;UBERON:0001285!1.63e-07!16;UBERON:0007684!1.63e-07!16;UBERON:0003220!1.63e-07!16;UBERON:0004208!1.63e-07!16;UBERON:0006914!2.07e-07!25;UBERON:0000487!2.64e-07!22;UBERON:0003081!3.84e-07!216;UBERON:0000353!5.19e-07!17;UBERON:0002204!7.46e-07!167;UBERON:0006555!9.66e-07!17;UBERON:0005103!9.66e-07!17;UBERON:0000083!9.66e-07!17;UBERON:0009201!9.66e-07!17;UBERON:0004819!9.66e-07!17;UBERON:0006553!9.66e-07!17;UBERON:0003074!9.66e-07!17;UBERON:0003060!9.66e-07!17 | |ontology_enrichment_uberon=UBERON:0002049!8.03e-22!79;UBERON:0007798!8.03e-22!79;UBERON:0000914!1.24e-20!83;UBERON:0002329!1.24e-20!83;UBERON:0003077!1.24e-20!83;UBERON:0003059!1.24e-20!83;UBERON:0007282!1.24e-20!83;UBERON:0009618!1.24e-20!83;UBERON:0007285!1.24e-20!83;UBERON:0000119!3.78e-19!312;UBERON:0005256!5.84e-19!143;UBERON:0000486!6.03e-19!82;UBERON:0000055!6.62e-19!69;UBERON:0003914!9.88e-19!118;UBERON:0000483!1.57e-18!309;UBERON:0001981!2.76e-18!60;UBERON:0007500!2.76e-18!60;UBERON:0004537!2.76e-18!60;UBERON:0006965!2.76e-18!60;UBERON:0004290!6.18e-18!70;UBERON:0004872!2.77e-17!84;UBERON:0001637!3.94e-16!42;UBERON:0003509!3.94e-16!42;UBERON:0004572!3.94e-16!42;UBERON:0004535!4.44e-16!110;UBERON:0001009!9.08e-16!113;UBERON:0001134!3.43e-15!61;UBERON:0002036!3.43e-15!61;UBERON:0003082!3.43e-15!61;UBERON:0000490!2.69e-14!138;UBERON:0002385!6.24e-14!63;UBERON:0001015!6.24e-14!63;UBERON:0000383!6.24e-14!63;UBERON:0004111!4.38e-13!241;UBERON:0002100!5.27e-13!216;UBERON:0000025!5.84e-13!194;UBERON:0000475!9.45e-13!365;UBERON:0000477!1.23e-12!286;UBERON:0004573!1.05e-11!33;UBERON:0004571!1.05e-11!33;UBERON:0000481!2.56e-11!347;UBERON:0000468!1.67e-10!659;UBERON:0000923!1.79e-10!604;UBERON:0005291!1.79e-10!604;UBERON:0006598!1.79e-10!604;UBERON:0002532!1.79e-10!604;UBERON:0000467!2.56e-10!625;UBERON:0002050!3.12e-10!605;UBERON:0005423!3.12e-10!605;UBERON:0000480!3.40e-10!626;UBERON:0000922!8.68e-10!612;UBERON:0003104!1.09e-09!238;UBERON:0009142!1.09e-09!238;UBERON:0000926!3.86e-09!448;UBERON:0004120!3.86e-09!448;UBERON:0006603!3.86e-09!448;UBERON:0001986!1.83e-08!18;UBERON:0004638!1.83e-08!18;UBERON:0004852!1.83e-08!18;UBERON:0004211!1.63e-07!16;UBERON:0001285!1.63e-07!16;UBERON:0007684!1.63e-07!16;UBERON:0003220!1.63e-07!16;UBERON:0004208!1.63e-07!16;UBERON:0006914!2.07e-07!25;UBERON:0000487!2.64e-07!22;UBERON:0003081!3.84e-07!216;UBERON:0000353!5.19e-07!17;UBERON:0002204!7.46e-07!167;UBERON:0006555!9.66e-07!17;UBERON:0005103!9.66e-07!17;UBERON:0000083!9.66e-07!17;UBERON:0009201!9.66e-07!17;UBERON:0004819!9.66e-07!17;UBERON:0006553!9.66e-07!17;UBERON:0003074!9.66e-07!17;UBERON:0003060!9.66e-07!17 | ||
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| ||
|short_description=p1@DEF8 | |short_description=p1@DEF8 | ||
}} | }} |
Revision as of 15:39, 17 November 2012
Short description: | p1@DEF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DEF8_5end |
Coexpression cluster: | C843_Alveolar_Mesenchymal_Hepatic_Placental_Renal_Smooth_Fibroblast |
Association with transcript: | 0bp_to_ENST00000268676, ENST00000418391, NM_001242816, NM_001242817, NM_001242818, NM_001242820, NM_001242821, NM_001242822, NM_017702, NM_207514, uc002fpl.2, uc002fpm.2, uc002fpn.1, uc002fpo.1, uc002fpp.1, uc010vpq.1_5end |
EntrezGene: | DEF8 |
HGNC: | 25969 |
UniProt: | Q6ZN54 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.29e-27 | 121 |
embryonic cell | 2.43e-24 | 250 |
smooth muscle cell | 2.89e-19 | 43 |
smooth muscle myoblast | 2.89e-19 | 43 |
muscle cell | 1.23e-18 | 55 |
muscle precursor cell | 1.83e-18 | 58 |
myoblast | 1.83e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.83e-18 | 58 |
electrically responsive cell | 8.56e-17 | 61 |
electrically active cell | 8.56e-17 | 61 |
vascular associated smooth muscle cell | 2.85e-16 | 32 |
meso-epithelial cell | 5.37e-12 | 45 |
endothelial cell | 1.16e-10 | 36 |
lining cell | 7.52e-09 | 58 |
barrier cell | 7.52e-09 | 58 |
endothelial cell of vascular tree | 1.28e-08 | 24 |
blood vessel endothelial cell | 1.83e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.83e-08 | 18 |
epithelial cell of nephron | 1.42e-07 | 15 |
kidney cortical cell | 8.31e-07 | 12 |
renal cortical epithelial cell | 8.31e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.