FFCP PHASE1:Hg19::chr6:138752021..138752035,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000047!6.40e-07!8 | |ontology_enrichment_celltype=CL:0000047!6.40e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;5.88e-30;6!CL:0000404;5.88e-30;6!CL:0002319;4.93e-12;25!CL:0000047;3.02e-11;2 | |ontology_enrichment_celltype_v019=CL:0000540;5.88e-30;6!CL:0000404;5.88e-30;6!CL:0002319;4.93e-12;25!CL:0000047;3.02e-11;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.75e-39,8;CL:0000540,5.60e-30,6;CL:0000031,5.60e-30,6;CL:0000404,5.60e-30,6;CL:0002319,4.86e-12,25 | |||
|ontology_enrichment_development_v019=CL:0000031;5.88e-30;6 | |ontology_enrichment_development_v019=CL:0000031;5.88e-30;6 | ||
|ontology_enrichment_disease=DOID:114!1.87e-07!2 | |ontology_enrichment_disease=DOID:114!1.87e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.48e-55!57;UBERON:0005068!2.48e-55!57;UBERON:0006241!2.48e-55!57;UBERON:0007135!2.48e-55!57;UBERON:0001017!2.67e-54!82;UBERON:0005743!2.51e-51!86;UBERON:0002616!1.12e-46!59;UBERON:0000073!1.56e-45!94;UBERON:0001016!1.56e-45!94;UBERON:0002020!2.37e-44!34;UBERON:0003528!2.37e-44!34;UBERON:0001893!6.04e-44!34;UBERON:0000955!1.86e-43!69;UBERON:0006238!1.86e-43!69;UBERON:0002780!3.31e-42!41;UBERON:0001890!3.31e-42!41;UBERON:0006240!3.31e-42!41;UBERON:0002791!1.15e-41!33;UBERON:0003080!4.68e-41!42;UBERON:0001869!3.52e-39!32;UBERON:0002619!4.50e-39!22;UBERON:0003075!1.57e-38!86;UBERON:0007284!1.57e-38!86;UBERON:0002346!2.12e-36!90;UBERON:0000956!5.36e-34!25;UBERON:0000203!5.36e-34!25;UBERON:0001950!1.75e-33!20;UBERON:0007023!6.62e-32!115;UBERON:0003056!2.80e-26!61;UBERON:0004121!1.13e-23!169;UBERON:0000924!7.01e-23!173;UBERON:0006601!7.01e-23!173;UBERON:0000033!4.31e-22!123;UBERON:0000153!1.19e-20!129;UBERON:0007811!1.19e-20!129;UBERON:0000025!8.89e-16!194;UBERON:0001872!2.87e-15!5;UBERON:0003076!7.35e-15!15;UBERON:0003057!7.35e-15!15;UBERON:0001871!1.67e-13!7;UBERON:0002298!4.71e-13!8;UBERON:0004111!2.23e-12!241;UBERON:0000200!4.00e-12!6;UBERON:0002308!1.21e-11!9;UBERON:0000125!1.21e-11!9;UBERON:0004733!1.49e-11!12;UBERON:0002028!1.49e-11!12;UBERON:0007277!1.49e-11!12;UBERON:0004732!1.39e-10!13;UBERON:0000349!2.13e-10!5;UBERON:0000477!3.11e-10!286;UBERON:0000483!3.92e-10!309;UBERON:0000119!6.24e-10!312;UBERON:0006331!6.49e-10!3;UBERON:0002771!9.06e-10!3;UBERON:0000988!9.62e-10!3;UBERON:0002680!2.97e-08!9;UBERON:0001895!2.97e-08!9;UBERON:0010092!2.97e-08!9;UBERON:0002420!3.42e-08!9;UBERON:0007245!3.42e-08!9;UBERON:0010009!3.42e-08!9;UBERON:0010011!3.42e-08!9;UBERON:0000454!3.42e-08!9;UBERON:0001954!1.20e-07!2;UBERON:0003022!1.20e-07!2;UBERON:0002421!1.20e-07!2;UBERON:0002600!1.20e-07!2;UBERON:0002148!1.87e-07!2;UBERON:0009662!1.87e-07!2;UBERON:0000064!2.39e-07!219;UBERON:0000369!2.63e-07!4;UBERON:0002435!2.63e-07!4;UBERON:0000204!2.63e-07!4;UBERON:0010082!2.63e-07!4;UBERON:0009663!6.58e-07!7 | |ontology_enrichment_uberon=UBERON:0001049!2.48e-55!57;UBERON:0005068!2.48e-55!57;UBERON:0006241!2.48e-55!57;UBERON:0007135!2.48e-55!57;UBERON:0001017!2.67e-54!82;UBERON:0005743!2.51e-51!86;UBERON:0002616!1.12e-46!59;UBERON:0000073!1.56e-45!94;UBERON:0001016!1.56e-45!94;UBERON:0002020!2.37e-44!34;UBERON:0003528!2.37e-44!34;UBERON:0001893!6.04e-44!34;UBERON:0000955!1.86e-43!69;UBERON:0006238!1.86e-43!69;UBERON:0002780!3.31e-42!41;UBERON:0001890!3.31e-42!41;UBERON:0006240!3.31e-42!41;UBERON:0002791!1.15e-41!33;UBERON:0003080!4.68e-41!42;UBERON:0001869!3.52e-39!32;UBERON:0002619!4.50e-39!22;UBERON:0003075!1.57e-38!86;UBERON:0007284!1.57e-38!86;UBERON:0002346!2.12e-36!90;UBERON:0000956!5.36e-34!25;UBERON:0000203!5.36e-34!25;UBERON:0001950!1.75e-33!20;UBERON:0007023!6.62e-32!115;UBERON:0003056!2.80e-26!61;UBERON:0004121!1.13e-23!169;UBERON:0000924!7.01e-23!173;UBERON:0006601!7.01e-23!173;UBERON:0000033!4.31e-22!123;UBERON:0000153!1.19e-20!129;UBERON:0007811!1.19e-20!129;UBERON:0000025!8.89e-16!194;UBERON:0001872!2.87e-15!5;UBERON:0003076!7.35e-15!15;UBERON:0003057!7.35e-15!15;UBERON:0001871!1.67e-13!7;UBERON:0002298!4.71e-13!8;UBERON:0004111!2.23e-12!241;UBERON:0000200!4.00e-12!6;UBERON:0002308!1.21e-11!9;UBERON:0000125!1.21e-11!9;UBERON:0004733!1.49e-11!12;UBERON:0002028!1.49e-11!12;UBERON:0007277!1.49e-11!12;UBERON:0004732!1.39e-10!13;UBERON:0000349!2.13e-10!5;UBERON:0000477!3.11e-10!286;UBERON:0000483!3.92e-10!309;UBERON:0000119!6.24e-10!312;UBERON:0006331!6.49e-10!3;UBERON:0002771!9.06e-10!3;UBERON:0000988!9.62e-10!3;UBERON:0002680!2.97e-08!9;UBERON:0001895!2.97e-08!9;UBERON:0010092!2.97e-08!9;UBERON:0002420!3.42e-08!9;UBERON:0007245!3.42e-08!9;UBERON:0010009!3.42e-08!9;UBERON:0010011!3.42e-08!9;UBERON:0000454!3.42e-08!9;UBERON:0001954!1.20e-07!2;UBERON:0003022!1.20e-07!2;UBERON:0002421!1.20e-07!2;UBERON:0002600!1.20e-07!2;UBERON:0002148!1.87e-07!2;UBERON:0009662!1.87e-07!2;UBERON:0000064!2.39e-07!219;UBERON:0000369!2.63e-07!4;UBERON:0002435!2.63e-07!4;UBERON:0000204!2.63e-07!4;UBERON:0010082!2.63e-07!4;UBERON:0009663!6.58e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.84e-14;22!UBERON:0000956;1.13e-12;25!UBERON:0000203;1.13e-12;25!UBERON:0001954;4.30e-11;2!UBERON:0003022;4.30e-11;2!UBERON:0002421;4.30e-11;2!UBERON:0002600;4.30e-11;2!UBERON:0000922;7.79e-10;49!UBERON:0002791;2.14e-09;32!UBERON:0001950;2.79e-09;20!UBERON:0001869;2.90e-09;32!UBERON:0003528;5.91e-09;34!UBERON:0002020;5.91e-09;34!UBERON:0002114;5.93e-08;2!UBERON:0002780;1.43e-07;41!UBERON:0001890;1.43e-07;41!UBERON:0001893;1.70e-07;34!UBERON:0001016;6.68e-07;83 | |ontology_enrichment_uberon_v019=UBERON:0002619;2.84e-14;22!UBERON:0000956;1.13e-12;25!UBERON:0000203;1.13e-12;25!UBERON:0001954;4.30e-11;2!UBERON:0003022;4.30e-11;2!UBERON:0002421;4.30e-11;2!UBERON:0002600;4.30e-11;2!UBERON:0000922;7.79e-10;49!UBERON:0002791;2.14e-09;32!UBERON:0001950;2.79e-09;20!UBERON:0001869;2.90e-09;32!UBERON:0003528;5.91e-09;34!UBERON:0002020;5.91e-09;34!UBERON:0002114;5.93e-08;2!UBERON:0002780;1.43e-07;41!UBERON:0001890;1.43e-07;41!UBERON:0001893;1.70e-07;34!UBERON:0001016;6.68e-07;83 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.28e-19,81;UBERON:0001016,4.82e-17,89;UBERON:0002619,2.94e-14,22;UBERON:0000956,1.17e-12,25;UBERON:0000203,1.17e-12,25;UBERON:0001954,4.52e-11,2;UBERON:0003022,4.52e-11,2;UBERON:0002421,4.52e-11,2;UBERON:0002600,4.52e-11,2;UBERON:0002791,4.75e-10,32;UBERON:0001869,4.75e-10,32;UBERON:0003528,1.71e-09,34;UBERON:0002020,1.71e-09,34;UBERON:0001893,1.71e-09,34;UBERON:0001950,2.83e-09,20;UBERON:0004121,8.50e-09,171;UBERON:0000924,8.50e-09,171;UBERON:0006601,8.50e-09,171;UBERON:0011216,2.87e-08,223;UBERON:0002780,5.80e-08,41;UBERON:0001890,5.80e-08,41;UBERON:0003080,5.80e-08,41;UBERON:0006240,5.80e-08,41;UBERON:0002114,5.93e-08,2;UBERON:0000955,3.02e-07,68;UBERON:0006238,3.02e-07,68 | |||
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| ||
|short_description=p28@NHSL1 | |short_description=p28@NHSL1 | ||
}} | }} |
Revision as of 05:13, 18 November 2012
Short description: | p28@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_NHSL1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_AK299585_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | B4DS58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.75e-39 | 8 |
neuron | 5.60e-30 | 6 |
neuroblast | 5.60e-30 | 6 |
electrically signaling cell | 5.60e-30 | 6 |
neural cell | 4.86e-12 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.28e-19 | 81 |
nervous system | 4.82e-17 | 89 |
regional part of cerebral cortex | 2.94e-14 | 22 |
cerebral cortex | 1.17e-12 | 25 |
pallium | 1.17e-12 | 25 |
Ammon's horn | 4.52e-11 | 2 |
lobe parts of cerebral cortex | 4.52e-11 | 2 |
hippocampal formation | 4.52e-11 | 2 |
limbic lobe | 4.52e-11 | 2 |
regional part of telencephalon | 4.75e-10 | 32 |
cerebral hemisphere | 4.75e-10 | 32 |
brain grey matter | 1.71e-09 | 34 |
gray matter | 1.71e-09 | 34 |
telencephalon | 1.71e-09 | 34 |
neocortex | 2.83e-09 | 20 |
ectoderm-derived structure | 8.50e-09 | 171 |
ectoderm | 8.50e-09 | 171 |
presumptive ectoderm | 8.50e-09 | 171 |
organ system subdivision | 2.87e-08 | 223 |
regional part of forebrain | 5.80e-08 | 41 |
forebrain | 5.80e-08 | 41 |
anterior neural tube | 5.80e-08 | 41 |
future forebrain | 5.80e-08 | 41 |
duodenum | 5.93e-08 | 2 |
brain | 3.02e-07 | 68 |
future brain | 3.02e-07 | 68 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.