FFCP PHASE1:Hg19::chr10:64028400..64028433,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000133!4.12e-11!59;CL:0002319!8.64e-10!25;CL:0000066!1.83e-09!254;CL:0000333!1.74e-07!41 | |ontology_enrichment_celltype=CL:0000133!4.12e-11!59;CL:0002319!8.64e-10!25;CL:0000066!1.83e-09!254;CL:0000333!1.74e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.04e-10;25!CL:0002321;5.13e-08;15 | |ontology_enrichment_celltype_v019=CL:0002319;1.04e-10;25!CL:0002321;5.13e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,9.21e-13,59;CL:0002319,8.32e-11,25;CL:0000066,3.53e-10,253;CL:0000333,3.81e-08,41;CL:0000221,4.83e-08,72;CL:0000047,4.28e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000133;6.24e-07;59 | |ontology_enrichment_development_v019=CL:0000133;6.24e-07;59 | ||
|ontology_enrichment_disease=DOID:162!5.56e-39!235;DOID:14566!1.50e-37!239;DOID:0050687!3.27e-26!143;DOID:305!7.57e-23!106;DOID:0050686!2.56e-17!137;DOID:3095!1.70e-08!22;DOID:2994!1.70e-08!22 | |ontology_enrichment_disease=DOID:162!5.56e-39!235;DOID:14566!1.50e-37!239;DOID:0050687!3.27e-26!143;DOID:305!7.57e-23!106;DOID:0050686!2.56e-17!137;DOID:3095!1.70e-08!22;DOID:2994!1.70e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.04e-09;22!DOID:2994;2.04e-09;22!DOID:305;6.84e-08;106!DOID:3119;2.66e-07;14!DOID:0050687;3.82e-07;143 | |ontology_enrichment_disease_v019=DOID:3095;2.04e-09;22!DOID:2994;2.04e-09;22!DOID:305;6.84e-08;106!DOID:3119;2.66e-07;14!DOID:0050687;3.82e-07;143 | ||
|ontology_enrichment_disease_v019_2=DOID:162,4.10e-38,235;DOID:14566,3.63e-36,239;DOID:0050687,1.04e-26,143;DOID:305,1.17e-21,106;DOID:0050686,7.78e-16,137;DOID:3095,1.38e-09,22;DOID:2994,1.38e-09,22;DOID:3119,3.43e-07,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@RTKN2 | |short_description=p1@RTKN2 | ||
}} | }} |
Revision as of 11:48, 18 November 2012
Short description: | p1@RTKN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RTKN2_5end |
Coexpression cluster: | C3033_non_colon_hepatoblastoma_astrocytoma_prostate_rhabdomyosarcoma_acute |
Association with transcript: | 32bp_to_ENST00000373789, ENST00000395260, ENST00000395265, NM_145307, uc001jlw.2, uc001jlx.2_5end |
EntrezGene: | RTKN2 |
HGNC: | 19364 |
UniProt: | Q8IZC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 9.21e-13 | 59 |
neural cell | 8.32e-11 | 25 |
epithelial cell | 3.53e-10 | 253 |
migratory neural crest cell | 3.81e-08 | 41 |
ectodermal cell | 4.83e-08 | 72 |
neuronal stem cell | 4.28e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.10e-38 | 235 |
disease of cellular proliferation | 3.63e-36 | 239 |
cell type cancer | 1.04e-26 | 143 |
carcinoma | 1.17e-21 | 106 |
organ system cancer | 7.78e-16 | 137 |
germ cell and embryonal cancer | 1.38e-09 | 22 |
germ cell cancer | 1.38e-09 | 22 |
gastrointestinal system cancer | 3.43e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.