FFCP PHASE1:Hg19::chr11:1948951..1948961,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002541!5.08e-21!3;CL:0002536!2.70e-14!2;CL:0002537!2.46e-13!5;CL:0002581!2.35e-08!1;CL:1001319!1.21e-07!1;CL:1000600!1.21e-07!1 | |ontology_enrichment_celltype=CL:0002541!5.08e-21!3;CL:0002536!2.70e-14!2;CL:0002537!2.46e-13!5;CL:0002581!2.35e-08!1;CL:1001319!1.21e-07!1;CL:1000600!1.21e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002537;2.91e-40;5!CL:0002541;1.98e-30;3!CL:0000349;3.21e-29;19!CL:0002581;4.58e-23;1!CL:0000134;1.87e-08;55 | |ontology_enrichment_celltype_v019=CL:0002537;2.91e-40;5!CL:0002541;1.98e-30;3!CL:0000349;3.21e-29;19!CL:0002581;4.58e-23;1!CL:0000134;1.87e-08;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.23e-40,5;CL:0002541,2.67e-30,3;CL:0000349,3.21e-29,19;CL:0002581,3.28e-23,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!5.75e-12!14 | |ontology_enrichment_disease=DOID:1749!5.75e-12!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.04e-07;14 | |ontology_enrichment_disease_v019=DOID:1749;3.04e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,3.04e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!7.97e-47!14;UBERON:0000158!7.97e-47!14;UBERON:0000478!1.27e-26!24;UBERON:0000305!1.66e-24!7;UBERON:0003124!6.10e-24!7;UBERON:0004923!1.01e-23!57;UBERON:0004871!1.99e-21!8;UBERON:0000476!5.08e-21!3;UBERON:0000920!5.08e-21!3;UBERON:0003343!5.30e-16!4;UBERON:0004785!5.30e-16!4;UBERON:0003127!2.70e-14!2;UBERON:0001255!1.02e-13!2;UBERON:0001556!1.02e-13!2;UBERON:0003729!6.54e-13!5;UBERON:0000344!3.89e-09!12;UBERON:0004645!1.21e-07!1;UBERON:0001256!1.21e-07!1;UBERON:0001259!1.21e-07!1;UBERON:0001987!1.35e-07!4;UBERON:0004340!1.35e-07!4;UBERON:0000064!2.74e-07!219 | |ontology_enrichment_uberon=UBERON:0005631!7.97e-47!14;UBERON:0000158!7.97e-47!14;UBERON:0000478!1.27e-26!24;UBERON:0000305!1.66e-24!7;UBERON:0003124!6.10e-24!7;UBERON:0004923!1.01e-23!57;UBERON:0004871!1.99e-21!8;UBERON:0000476!5.08e-21!3;UBERON:0000920!5.08e-21!3;UBERON:0003343!5.30e-16!4;UBERON:0004785!5.30e-16!4;UBERON:0003127!2.70e-14!2;UBERON:0001255!1.02e-13!2;UBERON:0001556!1.02e-13!2;UBERON:0003729!6.54e-13!5;UBERON:0000344!3.89e-09!12;UBERON:0004645!1.21e-07!1;UBERON:0001256!1.21e-07!1;UBERON:0001259!1.21e-07!1;UBERON:0001987!1.35e-07!4;UBERON:0004340!1.35e-07!4;UBERON:0000064!2.74e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.07e-55;10!UBERON:0000158;4.07e-55;10!UBERON:0003124;1.98e-30;3!UBERON:0000920;1.98e-30;3!UBERON:0000305;5.12e-29;7!UBERON:0000478;3.31e-23;24!UBERON:0005406;3.06e-12;2!UBERON:0004923;2.27e-09;55!UBERON:0003343;7.48e-07;4!UBERON:0004785;7.48e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0005631;4.07e-55;10!UBERON:0000158;4.07e-55;10!UBERON:0003124;1.98e-30;3!UBERON:0000920;1.98e-30;3!UBERON:0000305;5.12e-29;7!UBERON:0000478;3.31e-23;24!UBERON:0005406;3.06e-12;2!UBERON:0004923;2.27e-09;55!UBERON:0003343;7.48e-07;4!UBERON:0004785;7.48e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.66e-39,14;UBERON:0000158,1.66e-39,14;UBERON:0000920,2.67e-30,3;UBERON:0000305,4.23e-29,7;UBERON:0004871,1.44e-25,8;UBERON:0000478,3.31e-23,24;UBERON:0003124,1.31e-13,7;UBERON:0005406,2.59e-12,2;UBERON:0004923,4.20e-12,66;UBERON:0003343,7.27e-07,4;UBERON:0004785,7.27e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0.511707249066704,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,2.96964680832639,3.68592842519078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,2.55200927785536,0.0915975934018623,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74813611802872,0.235939446695481,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0.511707249066704,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,2.96964680832639,3.68592842519078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,2.55200927785536,0.0915975934018623,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74813611802872,0.235939446695481,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:1948951..1948961,+ | |short_description=p@chr11:1948951..1948961,+ | ||
}} | }} |
Revision as of 02:22, 19 November 2012
Short description: | p@chr11:1948951..1948961, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:1948951..1948961, + |
Coexpression cluster: | C3128_oral_amniotic_chorionic_squamous_Placental_Mesenchymal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.23e-40 | 5 |
chorionic membrane mesenchymal stem cell | 2.67e-30 | 3 |
extraembryonic cell | 3.21e-29 | 19 |
perirenal preadipocyte | 3.28e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.66e-39 | 14 |
membranous layer | 1.66e-39 | 14 |
egg chorion | 2.67e-30 | 3 |
amnion | 4.23e-29 | 7 |
somatic layer of lateral plate mesoderm | 1.44e-25 | 8 |
extraembryonic structure | 3.31e-23 | 24 |
chorion | 1.31e-13 | 7 |
perirenal fat | 2.59e-12 | 2 |
organ component layer | 4.20e-12 | 66 |
mucosa of oral region | 7.27e-07 | 4 |
respiratory system mucosa | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.04e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.