FFCP PHASE1:Hg19::chr6:123958111..123958139,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.93e-12;3!UBERON:0003057;4.93e-12;3!UBERON:0005062;2.86e-10;4!UBERON:0007284;2.86e-10;4 | |ontology_enrichment_development_v019=UBERON:0006241;4.93e-12;3!UBERON:0003057;4.93e-12;3!UBERON:0005062;2.86e-10;4!UBERON:0007284;2.86e-10;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;2.38e-09;2 | |ontology_enrichment_disease_v019=DOID:114;2.38e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,2.33e-09,2 | |||
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| ||
|short_description=p2@TRDN | |short_description=p2@TRDN | ||
}} | }} |
Revision as of 01:36, 20 November 2012
Short description: | p2@TRDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TRDN_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 0bp_to_ENST00000542443_5end |
EntrezGene: | TRDN |
HGNC: | 12261 |
UniProt: | F5H6E3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.70e-23 | 114 |
compound organ | 2.06e-15 | 68 |
primary circulatory organ | 1.14e-13 | 27 |
cardiac chamber | 1.36e-13 | 3 |
valve | 1.48e-13 | 3 |
cardiac mesenchyme | 1.48e-13 | 3 |
cardial valve | 1.48e-13 | 3 |
tunica intima | 1.48e-13 | 3 |
heart layer | 1.48e-13 | 3 |
endocardium | 1.48e-13 | 3 |
endocardial cushion | 1.48e-13 | 3 |
presumptive endocardium | 1.48e-13 | 3 |
spinal cord | 4.65e-12 | 3 |
dorsal region element | 4.65e-12 | 3 |
dorsum | 4.65e-12 | 3 |
muscle structure | 5.29e-10 | 2 |
muscle organ | 5.29e-10 | 2 |
throat | 9.64e-10 | 2 |
cardiac atrium | 1.54e-09 | 2 |
future cardiac atrium | 1.54e-09 | 2 |
atrioventricular valve | 1.60e-09 | 2 |
open tracheal system trachea | 2.99e-09 | 2 |
heart | 1.17e-07 | 24 |
primitive heart tube | 1.17e-07 | 24 |
primary heart field | 1.17e-07 | 24 |
anterior lateral plate mesoderm | 1.17e-07 | 24 |
heart tube | 1.17e-07 | 24 |
heart primordium | 1.17e-07 | 24 |
cardiac mesoderm | 1.17e-07 | 24 |
cardiogenic plate | 1.17e-07 | 24 |
heart rudiment | 1.17e-07 | 24 |
structure with developmental contribution from neural crest | 2.35e-07 | 132 |
tongue | 6.78e-07 | 3 |
gustatory system | 6.78e-07 | 3 |
future tongue | 6.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.33e-09 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.