FFCP PHASE1:Hg19::chr16:50715196..50715235,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!2.05e-85!172;CL:0000566!2.05e-85!172;CL:0002032!8.50e-81!165;CL:0000837!8.50e-81!165;CL:0000738!3.56e-77!140;CL:0000988!5.32e-77!182;CL:0002031!2.06e-64!124;CL:0002087!6.21e-62!119;CL:0000763!1.98e-50!112;CL:0000049!1.98e-50!112;CL:0000766!1.68e-41!76;CL:0000557!6.93e-37!71;CL:0000839!8.79e-36!70;CL:0002009!6.56e-34!65;CL:0002194!8.22e-33!63;CL:0000576!8.22e-33!63;CL:0000040!8.22e-33!63;CL:0000559!8.22e-33!63;CL:0002057!1.73e-30!42;CL:0000860!4.42e-27!45;CL:0000542!2.67e-25!53;CL:0000051!2.67e-25!53;CL:0000838!5.38e-25!52;CL:0000134!1.74e-13!358;CL:0000945!1.51e-12!24;CL:0000826!1.51e-12!24;CL:0002320!2.53e-12!365;CL:0000084!3.40e-12!25;CL:0000827!3.40e-12!25;CL:0000791!7.06e-12!18;CL:0000789!7.06e-12!18;CL:0002420!7.06e-12!18;CL:0002419!7.06e-12!18;CL:0000790!7.06e-12!18;CL:0000219!1.82e-08!390;CL:0000451!2.56e-08!10;CL:0000236!2.64e-08!14;CL:0000625!3.45e-08!11;CL:0000094!2.29e-07!8;CL:0000990!3.84e-07!8;CL:0002393!5.35e-07!9;CL:0002397!5.35e-07!9 | |ontology_enrichment_celltype=CL:0000037!2.05e-85!172;CL:0000566!2.05e-85!172;CL:0002032!8.50e-81!165;CL:0000837!8.50e-81!165;CL:0000738!3.56e-77!140;CL:0000988!5.32e-77!182;CL:0002031!2.06e-64!124;CL:0002087!6.21e-62!119;CL:0000763!1.98e-50!112;CL:0000049!1.98e-50!112;CL:0000766!1.68e-41!76;CL:0000557!6.93e-37!71;CL:0000839!8.79e-36!70;CL:0002009!6.56e-34!65;CL:0002194!8.22e-33!63;CL:0000576!8.22e-33!63;CL:0000040!8.22e-33!63;CL:0000559!8.22e-33!63;CL:0002057!1.73e-30!42;CL:0000860!4.42e-27!45;CL:0000542!2.67e-25!53;CL:0000051!2.67e-25!53;CL:0000838!5.38e-25!52;CL:0000134!1.74e-13!358;CL:0000945!1.51e-12!24;CL:0000826!1.51e-12!24;CL:0002320!2.53e-12!365;CL:0000084!3.40e-12!25;CL:0000827!3.40e-12!25;CL:0000791!7.06e-12!18;CL:0000789!7.06e-12!18;CL:0002420!7.06e-12!18;CL:0002419!7.06e-12!18;CL:0000790!7.06e-12!18;CL:0000219!1.82e-08!390;CL:0000451!2.56e-08!10;CL:0000236!2.64e-08!14;CL:0000625!3.45e-08!11;CL:0000094!2.29e-07!8;CL:0000990!3.84e-07!8;CL:0002393!5.35e-07!9;CL:0002397!5.35e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-25;33!CL:0002057;1.15e-25;33!CL:0000473;2.04e-24;39!CL:0000234;2.04e-24;39!CL:0000576;7.73e-24;48!CL:0000766;5.22e-21;69!CL:0002087;1.98e-19;104!CL:0000738;5.72e-19;136!CL:0000763;1.11e-17;100!CL:0000542;1.13e-15;53!CL:0000988;3.55e-15;177!CL:0000945;4.73e-14;24!CL:0000791;2.39e-13;18!CL:0000789;2.39e-13;18!CL:0002419;2.39e-13;18!CL:0000084;3.78e-12;25!CL:0000451;3.01e-09;10!CL:0000625;3.94e-09;11!CL:0000236;9.05e-09;13!CL:0000094;3.38e-08;8!CL:0000990;6.33e-08;8!CL:0000219;1.46e-07;193 | |ontology_enrichment_celltype_v019=CL:0000860;1.15e-25;33!CL:0002057;1.15e-25;33!CL:0000473;2.04e-24;39!CL:0000234;2.04e-24;39!CL:0000576;7.73e-24;48!CL:0000766;5.22e-21;69!CL:0002087;1.98e-19;104!CL:0000738;5.72e-19;136!CL:0000763;1.11e-17;100!CL:0000542;1.13e-15;53!CL:0000988;3.55e-15;177!CL:0000945;4.73e-14;24!CL:0000791;2.39e-13;18!CL:0000789;2.39e-13;18!CL:0002419;2.39e-13;18!CL:0000084;3.78e-12;25!CL:0000451;3.01e-09;10!CL:0000625;3.94e-09;11!CL:0000236;9.05e-09;13!CL:0000094;3.38e-08;8!CL:0000990;6.33e-08;8!CL:0000219;1.46e-07;193 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.04e-101,168;CL:0002032,1.81e-95,161;CL:0000837,1.81e-95,161;CL:0000988,1.10e-92,177;CL:0000738,7.32e-91,136;CL:0002031,3.68e-76,120;CL:0002087,2.41e-73,115;CL:0000763,1.89e-62,108;CL:0000049,1.89e-62,108;CL:0000766,3.41e-52,72;CL:0000557,9.61e-47,67;CL:0000839,2.00e-45,66;CL:0002009,2.26e-43,61;CL:0002194,4.08e-42,59;CL:0000576,4.08e-42,59;CL:0000040,4.08e-42,59;CL:0000559,4.08e-42,59;CL:0000473,4.76e-38,48;CL:0000234,4.76e-38,48;CL:0000860,1.28e-34,42;CL:0002057,1.28e-34,42;CL:0000542,5.11e-27,53;CL:0000051,5.11e-27,53;CL:0000838,1.15e-26,52;CL:0000134,1.79e-20,354;CL:0002320,3.71e-19,361;CL:0000219,1.20e-14,386;CL:0000945,4.16e-14,24;CL:0000826,4.16e-14,24;CL:0000791,2.42e-13,18;CL:0000789,2.42e-13,18;CL:0002420,2.42e-13,18;CL:0002419,2.42e-13,18;CL:0000790,2.42e-13,18;CL:0000084,3.96e-12,25;CL:0000827,3.96e-12,25;CL:0000048,8.15e-10,427;CL:0000034,2.63e-09,441;CL:0000451,2.80e-09,10;CL:0000236,2.90e-09,14;CL:0000723,3.88e-09,433;CL:0000625,3.93e-09,11;CL:0000094,3.40e-08,8;CL:0000990,6.12e-08,8;CL:0002393,8.94e-08,9;CL:0002397,8.94e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.81e-25;42!CL:0000049;3.26e-17;108!CL:0000051;1.13e-15;53!CL:0000790;2.39e-13;18 | |ontology_enrichment_development_v019=CL:0002057;4.81e-25;42!CL:0000049;3.26e-17;108!CL:0000051;1.13e-15;53!CL:0000790;2.39e-13;18 | ||
|ontology_enrichment_disease=DOID:2531!5.35e-11!51;DOID:0060083!5.35e-11!51;DOID:1240!3.79e-09!39;DOID:8692!1.46e-07!31 | |ontology_enrichment_disease=DOID:2531!5.35e-11!51;DOID:0060083!5.35e-11!51;DOID:1240!3.79e-09!39;DOID:8692!1.46e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.86e-08;31!DOID:1240;5.74e-08;39!DOID:2531;3.80e-07;51!DOID:0060083;3.80e-07;51 | |ontology_enrichment_disease_v019=DOID:8692;1.86e-08;31!DOID:1240;5.74e-08;39!DOID:2531;3.80e-07;51!DOID:0060083;3.80e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,7.58e-12,51;DOID:0060083,7.58e-12,51;DOID:1240,3.27e-10,39;DOID:8692,6.78e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.13e-42!102;UBERON:0003061!2.13e-42!102;UBERON:0002193!4.24e-40!112;UBERON:0002371!1.18e-31!80;UBERON:0001474!2.02e-27!86;UBERON:0002405!5.26e-26!115;UBERON:0004765!1.66e-20!101;UBERON:0001434!1.66e-20!101;UBERON:0007023!2.30e-20!115;UBERON:0002384!4.09e-11!375;UBERON:0003081!1.85e-08!216;UBERON:0000178!3.93e-07!15;UBERON:0000179!3.93e-07!15;UBERON:0000463!3.93e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!2.13e-42!102;UBERON:0003061!2.13e-42!102;UBERON:0002193!4.24e-40!112;UBERON:0002371!1.18e-31!80;UBERON:0001474!2.02e-27!86;UBERON:0002405!5.26e-26!115;UBERON:0004765!1.66e-20!101;UBERON:0001434!1.66e-20!101;UBERON:0007023!2.30e-20!115;UBERON:0002384!4.09e-11!375;UBERON:0003081!1.85e-08!216;UBERON:0000178!3.93e-07!15;UBERON:0000179!3.93e-07!15;UBERON:0000463!3.93e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.23e-08;15!UBERON:0000179;3.23e-08;15!UBERON:0000463;3.23e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.23e-08;15!UBERON:0000179;3.23e-08;15!UBERON:0000463;3.23e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.54e-53,98;UBERON:0003061,2.54e-53,98;UBERON:0002193,4.20e-48,108;UBERON:0002371,1.40e-40,76;UBERON:0002405,2.94e-40,93;UBERON:0001474,1.21e-35,82;UBERON:0004765,3.83e-30,90;UBERON:0001434,1.35e-24,100;UBERON:0002384,8.20e-18,371;UBERON:0003081,1.71e-13,203;UBERON:0000178,3.30e-08,15;UBERON:0000179,3.30e-08,15;UBERON:0000463,3.30e-08,15;UBERON:0002204,4.90e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,26.5154517945391,27.4215968762819,24.1642098632995,29.5023207636678,18.4238111086662,18.1134864279809,0,0,0,7.20444965396805,1.84820002233648,12.3312184520636,21.6058209327432,20.6560780894246,20.3990218472901,17.2414915164742,12.6318529747402,15.7121096256854,48.1268170360359,42.3221056931467,57.7350065627002,47.4155235287597,20.9695622891131,26.3250415260838,136.078501568377,133.203567395132,126.045028530616,18.2715210790408,16.7826017731795,13.5426486594342,48.1900389229068,22.924116604859,33.9332461512078,38.5665704387337,25.3533931390114,32.6061934157511,184.386876804374,174.131773103685,185.833991232255,33.3740624422872,15.8867862913519,21.7987787148451,141.20174987429,119.419588318226,129.661740288955,39.350967671169,15.8359383474653,30.3803891943249,30.6320165152316,27.2133503955256,34.8033351543904,30.7780449341397,28.2332558542032,32.145117339416,23.9410704742649,32.8212517378499,33.0622118313987,31.6793240030381,25.122376118058,37.3593886622693,22.1899715734584,28.8285110665929,22.4153451582248,38.340602621522,18.1270213361719,10.2458334439701,7.6340834618222,11.0859236156316,13.2171328579026,6.72610275577843,16.5931973408299,13.3762643677406,10.6112905942274,18.7097364089553,34.273231555089,25.0960145307865,26.0396293154103,33.1205438293449,44.4527722971843,39.4771916016282,41.4268382871372,50.0987147965279,50.5960712916417,46.6913057739963,47.193678621255,54.1646034860263,42.0214474315826,27.5813007481432,26.2190011527919,28.2245914273437,35.6924429497333,29.124757513746,31.2700975389193,27.8321661221453,36.6350226472711,26.0433381542567,31.3649174667963,21.231091789966,25.7253088420381,54.9695196830322,46.6451186526713,41.8775278429734,12.4996180799334,14.4417705723094,12.7445475416863,0,0,0,0,0,0,0,0,0,0,0.087834785693126,2.75056058545197,0,0,40.5684242068354,35.3483366717512,43.6102110501878,24.0875530548395,29.7437353605666,21.9159925784443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.1614254154742,93.0672633955981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,5.73902029239046,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,15.0192373713312,13.806251643215,31.2125440806329,0,0,0,0,0,0,11.3312544716067,54.5900290882001,9.95174954595706,8.2148373447668,15.5278193114447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6760427090024,23.6060832973099,8.43335757932127,0,0,0,0,0,0,21.7445179347443,15.3683992957503,16.8189508390424,19.5081415145218,0,0,0,0,0.637938751653163,84.6377937060316,44.8742188806037,52.6307702063765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0903386645345,18.1199928687638,18.3571399421924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,3.39866086332371,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.478587984798,0,0,0,0,0,0.844430541190656,0,0,0,0,1.34060455107157,0,2.63602642174982,0,0,0,0,53.2819989693778,45.8782324285425,67.2183680865512,47.4081233161,44.427125493309,49.9324449618392,31.8618547970488,62.6568889272474,0,0,0,4.45927620301725,1.58696134274089,0,0.159426272728822,23.1512070862067,24.1296766366782,13.9704564597763,9.08941432768755,32.0108783049343,47.2445785598708,7.05059530978605,37.5951715635101,31.3189788932966,15.8982194352663,21.7943683766331,19.588926933755,6.87010689511529,13.5185936295722,14.538947013007,8.84300451073115,13.4817785827408,0,0,1.35227839237992,0,7.04935025439248,0,1.90460633053462,0,13.4846494975749,0,0,1.78178808499583,0,0.994147647766298,3.51673541026282,0,3.13127361030843,0,1.39473591775749,12.7090601144328,0,0,7.50817313312524,0,0,0,18.4166053281674,1.08507746200627,33.5276329285716,0,0,1.29875337426592,0,0,0,1.44999915086959,0,0,0,0,0,0,0,2.17073589525734,0,0.331737779793674,0,0.658156191461918,0,0,0.692552326534174,0,0,0,0,0.31900115973192,0.274792780205587,1.06606955203727,10.2193298195736,13.8142625627622,9.97270091400938,0,0,0,0,6.19852658023477,0,0,0,0,0.995261931078505,1.59223616106011,0,0,0,0,1.81983059047828,0.802577647298789,0.702793337176017,5.29118888725431,0,0,0.394584402849391,4.83962864194656,0,7.01371033876216,0,0,0,0,0,0,0,0,0,0,0,2.44617335538842,0,0,0,0,1.45483524732629,0,0,0,0,0.443175571691151,0,0.0801588202515337,4.0556069000477,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,8.21432273351958,11.4971929260275,0,10.5154941711726,0.279282401272254,0.458320848023367,0.717873024576814,0.199679000498991,0.858452096273142,1.56220020209311,0.671834724867263,0,0,0,0,0,0,6.18115324080227,0,2.58786471611994,0,0,0,29.2466059016951,11.6070293183692,0.607495566580247,0,2.20655980437755,0.891727998294968,0,0,0,2.85878130549347,0,0,0,0,0,0,4.67927368271232,0,0,0.879313402068495,2.65013777824443,0.646414781807753,3.17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| ||
|short_description=p1@SNX20 | |short_description=p1@SNX20 | ||
}} | }} |
Revision as of 04:01, 20 November 2012
Short description: | p1@SNX20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SNX20_5end |
Coexpression cluster: | C451_CD14_CD4_Eosinophils_Neutrophils_adult_Natural_CD8 |
Association with transcript: | 0bp_to_ENST00000330943_5end |
EntrezGene: | SNX20 |
HGNC: | 30390 |
UniProt: | Q7Z614 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.54e-53 | 98 |
blood island | 2.54e-53 | 98 |
hemolymphoid system | 4.20e-48 | 108 |
bone marrow | 1.40e-40 | 76 |
immune system | 2.94e-40 | 93 |
bone element | 1.21e-35 | 82 |
skeletal element | 3.83e-30 | 90 |
skeletal system | 1.35e-24 | 100 |
connective tissue | 8.20e-18 | 371 |
lateral plate mesoderm | 1.71e-13 | 203 |
blood | 3.30e-08 | 15 |
haemolymphatic fluid | 3.30e-08 | 15 |
organism substance | 3.30e-08 | 15 |
musculoskeletal system | 4.90e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.58e-12 | 51 |
immune system cancer | 7.58e-12 | 51 |
leukemia | 3.27e-10 | 39 |
myeloid leukemia | 6.78e-09 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.