FFCP PHASE1:Hg19::chr10:6114599..6114604,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002087!6.29e-16!119;CL:0000738!1.16e-13!140;CL:0002031!4.55e-13!124;CL:0000988!2.37e-12!182;CL:0000542!8.84e-12!53;CL:0000051!8.84e-12!53;CL:0000037!3.39e-11!172;CL:0000566!3.39e-11!172;CL:0000838!6.45e-11!52;CL:0002032!1.02e-10!165;CL:0000837!1.02e-10!165;CL:0000084!3.86e-07!25;CL:0000827!3.86e-07!25 | |ontology_enrichment_celltype=CL:0002087!6.29e-16!119;CL:0000738!1.16e-13!140;CL:0002031!4.55e-13!124;CL:0000988!2.37e-12!182;CL:0000542!8.84e-12!53;CL:0000051!8.84e-12!53;CL:0000037!3.39e-11!172;CL:0000566!3.39e-11!172;CL:0000838!6.45e-11!52;CL:0002032!1.02e-10!165;CL:0000837!1.02e-10!165;CL:0000084!3.86e-07!25;CL:0000827!3.86e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000785;7.08e-14;1!CL:0000819;7.08e-14;1!CL:0000815;1.40e-07;2!CL:0000792;1.40e-07;2!CL:0002677;1.40e-07;2 | |ontology_enrichment_celltype_v019=CL:0000785;7.08e-14;1!CL:0000819;7.08e-14;1!CL:0000815;1.40e-07;2!CL:0000792;1.40e-07;2!CL:0002677;1.40e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000819,7.55e-14,1;CL:0000815,1.36e-07,2;CL:0000792,1.36e-07,2;CL:0002677,1.36e-07,2;CL:0000785,1.45e-07,2;CL:0000955,1.45e-07,2;CL:0000818,1.45e-07,2;CL:0000954,1.45e-07,2;CL:0000816,1.45e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;1.40e-07;2 | |ontology_enrichment_development_v019=CL:0000954;1.40e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;7.08e-14;1!DOID:8675;7.08e-14;1 | |ontology_enrichment_disease_v019=DOID:0060073;7.08e-14;1!DOID:8675;7.08e-14;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,7.55e-14,1;DOID:8675,7.55e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.63e-12!115;UBERON:0002193!4.05e-09!112;UBERON:0002390!4.05e-09!102;UBERON:0003061!4.05e-09!102;UBERON:0001049!8.84e-09!57;UBERON:0005068!8.84e-09!57;UBERON:0006241!8.84e-09!57;UBERON:0007135!8.84e-09!57 | |ontology_enrichment_uberon=UBERON:0007023!5.63e-12!115;UBERON:0002193!4.05e-09!112;UBERON:0002390!4.05e-09!102;UBERON:0003061!4.05e-09!102;UBERON:0001049!8.84e-09!57;UBERON:0005068!8.84e-09!57;UBERON:0006241!8.84e-09!57;UBERON:0007135!8.84e-09!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002148;1.99e-07;2!UBERON:0006331;1.99e-07;2!UBERON:0009662;1.99e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002148;1.99e-07;2!UBERON:0006331;1.99e-07;2!UBERON:0009662;1.99e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002148,2.25e-07,2;UBERON:0006331,2.25e-07,2;UBERON:0009662,2.25e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0,0,0,0,0.154934401160603,0,0.293600439334847,0,0.200544447470142,0,0,0.971680998056939,0.515151135268373,0,0,0,0,0,0,0.28769239232215,1.5369642391746,1.18241114944293,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0.868755378820466,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,1.77901850772711,0,0,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,0,0,0,0,0.205601498999509,4.51403537554831,0.651844533267181,0.473447805734733,0,4.34500781852177,3.82987679717288,4.43067789167242,4.33286182024025,3.20228299314188,5.46249259751489,0.164437904603676,0.276350017785848,0,0,0,0,0.566546713487831,0,0,0,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822724546172388,0.648473311192717,0,0,0,0,0,0.185803175125719,0,0.284567373393656,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,1.00299045849731,0,0,0,0,0,0.281338832821026,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,3.85477467284809,1.35920332841153,0.939797545549098,0.067401132980677,0,0,3.28418620588199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05786081394152,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0.500763722825999,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0,0.59996218756479,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798169295285756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.620060389503552,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.594092800654172,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0.645889098360061,0.993195428733726,0,0,0,0,0,0.5388164241167,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0,0,0,0,0.154934401160603,0,0.293600439334847,0,0.200544447470142,0,0,0.971680998056939,0.515151135268373,0,0,0,0,0,0,0.28769239232215,1.5369642391746,1.18241114944293,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0.868755378820466,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,1.77901850772711,0,0,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,0,0,0,0,0.205601498999509,4.51403537554831,0.651844533267181,0.473447805734733,0,4.34500781852177,3.82987679717288,4.43067789167242,4.33286182024025,3.20228299314188,5.46249259751489,0.164437904603676,0.276350017785848,0,0,0,0,0.566546713487831,0,0,0,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822724546172388,0.648473311192717,0,0,0,0,0,0.185803175125719,0,0.284567373393656,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,1.00299045849731,0,0,0,0,0,0.281338832821026,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,3.85477467284809,1.35920332841153,0.939797545549098,0.067401132980677,0,0,3.28418620588199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05786081394152,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0.500763722825999,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0,0.59996218756479,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798169295285756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.620060389503552,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.594092800654172,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0.645889098360061,0.993195428733726,0,0,0,0,0,0.5388164241167,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0.320568492303233 | ||
|short_description=p@chr10:6114599..6114604,+ | |short_description=p@chr10:6114599..6114604,+ | ||
}} | }} |
Revision as of 21:23, 20 November 2012
Short description: | p@chr10:6114599..6114604, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:6114599..6114604, + |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 7.55e-14 | 1 |
regulatory T cell | 1.36e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.36e-07 | 2 |
naive regulatory T cell | 1.36e-07 | 2 |
mature B cell | 1.45e-07 | 2 |
pre-B-II cell | 1.45e-07 | 2 |
transitional stage B cell | 1.45e-07 | 2 |
small pre-B-II cell | 1.45e-07 | 2 |
immature B cell | 1.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
locus ceruleus | 2.25e-07 | 2 |
brainstem nucleus | 2.25e-07 | 2 |
hindbrain nucleus | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 7.55e-14 | 1 |
lymphosarcoma | 7.55e-14 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.