FFCP PHASE1:Hg19::chr21:47546031..47546052,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.31e-37!180;CL:0000057!2.60e-23!75;CL:0000680!2.67e-15!57;CL:0000056!2.67e-15!57;CL:0000355!2.67e-15!57;CL:0000393!9.98e-15!60;CL:0000211!9.98e-15!60;CL:0000048!1.42e-14!430;CL:0000187!1.46e-14!54;CL:0000183!4.51e-14!59;CL:0000723!1.24e-13!436;CL:0000034!4.94e-13!444;CL:0000192!4.23e-11!42;CL:0000514!4.23e-11!42;CL:0002620!2.17e-10!23;CL:0000359!6.64e-08!32;CL:0002570!1.57e-07!8;CL:0002371!1.86e-07!591;CL:0002320!6.04e-07!365 | |ontology_enrichment_celltype=CL:0000055!1.31e-37!180;CL:0000057!2.60e-23!75;CL:0000680!2.67e-15!57;CL:0000056!2.67e-15!57;CL:0000355!2.67e-15!57;CL:0000393!9.98e-15!60;CL:0000211!9.98e-15!60;CL:0000048!1.42e-14!430;CL:0000187!1.46e-14!54;CL:0000183!4.51e-14!59;CL:0000723!1.24e-13!436;CL:0000034!4.94e-13!444;CL:0000192!4.23e-11!42;CL:0000514!4.23e-11!42;CL:0002620!2.17e-10!23;CL:0000359!6.64e-08!32;CL:0002570!1.57e-07!8;CL:0002371!1.86e-07!591;CL:0002320!6.04e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0002570;1.28e-12;8!CL:0002559;5.45e-10;5!CL:0000723;6.58e-10;61!CL:0000134;8.68e-10;55!CL:0000048;4.16e-09;58!CL:0000499;1.04e-08;28!CL:0000034;1.11e-07;69!CL:0002320;7.57e-07;188 | |ontology_enrichment_celltype_v019=CL:0002570;1.28e-12;8!CL:0002559;5.45e-10;5!CL:0000723;6.58e-10;61!CL:0000134;8.68e-10;55!CL:0000048;4.16e-09;58!CL:0000499;1.04e-08;28!CL:0000034;1.11e-07;69!CL:0002320;7.57e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,7.23e-15,427;CL:0000723,2.67e-14,433;CL:0000057,5.47e-14,76;CL:0000034,1.44e-13,441;CL:0002320,6.88e-13,361;CL:0002570,8.79e-13,8;CL:0000134,4.12e-10,354;CL:0002559,4.59e-10,5;CL:0000499,7.29e-09,28;CL:0000219,5.65e-08,386 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.78e-20!83;UBERON:0002329!2.78e-20!83;UBERON:0003077!2.78e-20!83;UBERON:0003059!2.78e-20!83;UBERON:0007282!2.78e-20!83;UBERON:0009618!2.78e-20!83;UBERON:0007285!2.78e-20!83;UBERON:0004290!4.17e-19!70;UBERON:0000486!1.86e-15!82;UBERON:0005256!1.89e-15!143;UBERON:0001134!3.87e-14!61;UBERON:0002036!3.87e-14!61;UBERON:0003082!3.87e-14!61;UBERON:0002385!4.34e-14!63;UBERON:0001015!4.34e-14!63;UBERON:0000383!4.34e-14!63;UBERON:0002199!2.33e-11!45;UBERON:0002416!2.33e-11!45;UBERON:0002100!2.96e-11!216;UBERON:0003102!1.27e-10!95;UBERON:0001013!7.29e-10!14;UBERON:0000475!2.97e-09!365;UBERON:0002097!2.84e-08!40;UBERON:0003104!4.10e-08!238;UBERON:0009142!4.10e-08!238;UBERON:0002384!1.57e-07!375;UBERON:0002067!3.74e-07!9;UBERON:0004016!3.74e-07!9;UBERON:0010083!3.74e-07!9;UBERON:0004573!8.69e-07!33;UBERON:0004571!8.69e-07!33 | |ontology_enrichment_uberon=UBERON:0000914!2.78e-20!83;UBERON:0002329!2.78e-20!83;UBERON:0003077!2.78e-20!83;UBERON:0003059!2.78e-20!83;UBERON:0007282!2.78e-20!83;UBERON:0009618!2.78e-20!83;UBERON:0007285!2.78e-20!83;UBERON:0004290!4.17e-19!70;UBERON:0000486!1.86e-15!82;UBERON:0005256!1.89e-15!143;UBERON:0001134!3.87e-14!61;UBERON:0002036!3.87e-14!61;UBERON:0003082!3.87e-14!61;UBERON:0002385!4.34e-14!63;UBERON:0001015!4.34e-14!63;UBERON:0000383!4.34e-14!63;UBERON:0002199!2.33e-11!45;UBERON:0002416!2.33e-11!45;UBERON:0002100!2.96e-11!216;UBERON:0003102!1.27e-10!95;UBERON:0001013!7.29e-10!14;UBERON:0000475!2.97e-09!365;UBERON:0002097!2.84e-08!40;UBERON:0003104!4.10e-08!238;UBERON:0009142!4.10e-08!238;UBERON:0002384!1.57e-07!375;UBERON:0002067!3.74e-07!9;UBERON:0004016!3.74e-07!9;UBERON:0010083!3.74e-07!9;UBERON:0004573!8.69e-07!33;UBERON:0004571!8.69e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.12e-15;14!UBERON:0002073;5.45e-10;5!UBERON:0002072;2.16e-09;5!UBERON:0002384;9.92e-08;198!UBERON:0002199;1.00e-07;46!UBERON:0002416;1.00e-07;46!UBERON:0003102;1.32e-07;50!UBERON:0004905;2.41e-07;8!UBERON:0000982;2.41e-07;8!UBERON:0004770;2.41e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0001013;3.12e-15;14!UBERON:0002073;5.45e-10;5!UBERON:0002072;2.16e-09;5!UBERON:0002384;9.92e-08;198!UBERON:0002199;1.00e-07;46!UBERON:0002416;1.00e-07;46!UBERON:0003102;1.32e-07;50!UBERON:0004905;2.41e-07;8!UBERON:0000982;2.41e-07;8!UBERON:0004770;2.41e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.50e-15,14;UBERON:0002384,1.59e-12,371;UBERON:0002199,5.31e-11,46;UBERON:0002416,5.31e-11,46;UBERON:0002073,4.59e-10,5;UBERON:0005086,4.59e-10,5;UBERON:0002072,2.45e-09,5;UBERON:0003102,3.62e-09,99;UBERON:0007524,1.61e-08,73;UBERON:0002329,3.35e-08,71;UBERON:0003059,3.35e-08,71;UBERON:0007282,3.35e-08,71;UBERON:0004290,3.35e-08,71;UBERON:0009618,3.35e-08,71;UBERON:0003077,5.36e-08,72;UBERON:0007285,5.36e-08,72;UBERON:0000486,1.27e-07,83;UBERON:0004905,1.65e-07,8;UBERON:0000982,1.65e-07,8;UBERON:0004770,1.65e-07,8;UBERON:0003104,2.95e-07,160;UBERON:0009142,2.95e-07,160;UBERON:0005256,3.92e-07,122;UBERON:0007503,6.77e-07,78 | |||
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| ||
|short_description=p29@COL6A2 | |short_description=p29@COL6A2 | ||
}} | }} |
Revision as of 00:25, 21 November 2012
Short description: | p29@COL6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_29_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | -351bp_to_uc002zic.1_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 7.23e-15 | 427 |
somatic stem cell | 2.67e-14 | 433 |
fibroblast | 5.47e-14 | 76 |
stem cell | 1.44e-13 | 441 |
connective tissue cell | 6.88e-13 | 361 |
mesenchymal stem cell of adipose | 8.79e-13 | 8 |
mesenchymal cell | 4.12e-10 | 354 |
hair follicle cell | 4.59e-10 | 5 |
stromal cell | 7.29e-09 | 28 |
motile cell | 5.65e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.50e-15 | 14 |
connective tissue | 1.59e-12 | 371 |
integument | 5.31e-11 | 46 |
integumental system | 5.31e-11 | 46 |
hair follicle | 4.59e-10 | 5 |
hair follicle placode | 4.59e-10 | 5 |
hypodermis | 2.45e-09 | 5 |
surface structure | 3.62e-09 | 99 |
dense mesenchyme tissue | 1.61e-08 | 73 |
somite | 3.35e-08 | 71 |
presomitic mesoderm | 3.35e-08 | 71 |
presumptive segmental plate | 3.35e-08 | 71 |
dermomyotome | 3.35e-08 | 71 |
trunk paraxial mesoderm | 3.35e-08 | 71 |
paraxial mesoderm | 5.36e-08 | 72 |
presumptive paraxial mesoderm | 5.36e-08 | 72 |
multilaminar epithelium | 1.27e-07 | 83 |
articulation | 1.65e-07 | 8 |
skeletal joint | 1.65e-07 | 8 |
articular system | 1.65e-07 | 8 |
mesenchyme | 2.95e-07 | 160 |
entire embryonic mesenchyme | 2.95e-07 | 160 |
trunk mesenchyme | 3.92e-07 | 122 |
epithelial vesicle | 6.77e-07 | 78 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.