FFCP PHASE1:Hg19::chr10:96046794..96046821,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!5.85e-13!180;CL:0000057!3.60e-11!75;CL:0000327!2.36e-07!14 | |ontology_enrichment_celltype=CL:0000055!5.85e-13!180;CL:0000057!3.60e-11!75;CL:0000327!2.36e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.40e-10;12!CL:0002590;2.43e-09;3!CL:0002580;2.74e-09;3!CL:0002615;2.78e-09;3!CL:0002579;6.88e-09;3!CL:0002586;1.78e-08;3!CL:0000708;3.90e-08;3!CL:0000136;2.51e-07;13!CL:0000327;4.09e-07;15!CL:0000349;4.14e-07;19!CL:0002617;5.24e-07;2 | |ontology_enrichment_celltype_v019=CL:0002334;2.40e-10;12!CL:0002590;2.43e-09;3!CL:0002580;2.74e-09;3!CL:0002615;2.78e-09;3!CL:0002579;6.88e-09;3!CL:0002586;1.78e-08;3!CL:0000708;3.90e-08;3!CL:0000136;2.51e-07;13!CL:0000327;4.09e-07;15!CL:0000349;4.14e-07;19!CL:0002617;5.24e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.95e-10,12;CL:0002590,2.40e-09,3;CL:0002580,2.67e-09,3;CL:0002615,3.14e-09,3;CL:0002579,5.97e-09,3;CL:0002586,1.78e-08,3;CL:0000708,5.82e-08,3;CL:0000349,3.44e-07,19;CL:0000327,4.62e-07,15;CL:0002617,5.18e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!3.05e-09!12;UBERON:0000042!3.05e-09!12;UBERON:0003688!3.34e-09!6;UBERON:0002358!3.34e-09!6;UBERON:0003684!3.34e-09!6;UBERON:0001178!3.34e-09!6;UBERON:0004923!8.22e-08!57 | |ontology_enrichment_uberon=UBERON:0004457!3.05e-09!12;UBERON:0000042!3.05e-09!12;UBERON:0003688!3.34e-09!6;UBERON:0002358!3.34e-09!6;UBERON:0003684!3.34e-09!6;UBERON:0001178!3.34e-09!6;UBERON:0004923!8.22e-08!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.80e-16;6!UBERON:0002358;1.80e-16;6!UBERON:0003684;1.80e-16;6!UBERON:0001178;1.80e-16;6!UBERON:0004457;5.16e-14;9!UBERON:0000042;5.16e-14;9!UBERON:0000966;1.23e-08;5!UBERON:0005388;1.23e-08;5!UBERON:0001802;1.23e-08;5!UBERON:0001781;1.78e-08;3!UBERON:0001782;1.78e-08;3!UBERON:0003210;3.90e-08;3!UBERON:0000310;4.81e-07;10!UBERON:0000478;6.92e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.80e-16;6!UBERON:0002358;1.80e-16;6!UBERON:0003684;1.80e-16;6!UBERON:0001178;1.80e-16;6!UBERON:0004457;5.16e-14;9!UBERON:0000042;5.16e-14;9!UBERON:0000966;1.23e-08;5!UBERON:0005388;1.23e-08;5!UBERON:0001802;1.23e-08;5!UBERON:0001781;1.78e-08;3!UBERON:0001782;1.78e-08;3!UBERON:0003210;3.90e-08;3!UBERON:0000310;4.81e-07;10!UBERON:0000478;6.92e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.76e-16,6;UBERON:0002358,1.76e-16,6;UBERON:0003684,1.76e-16,6;UBERON:0001178,1.76e-16,6;UBERON:0004457,3.05e-10,12;UBERON:0000042,3.05e-10,12;UBERON:0001782,1.78e-08,3;UBERON:0005424,1.78e-08,3;UBERON:0004923,3.62e-08,66;UBERON:0003210,5.82e-08,3;UBERON:0000966,3.22e-07,6;UBERON:0005388,3.22e-07,6;UBERON:0001802,3.22e-07,6;UBERON:0000310,4.73e-07,10;UBERON:0000478,5.89e-07,24 | |||
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| ||
|short_description=p1@LOC100128054 | |short_description=p1@LOC100128054 | ||
}} | }} |
Revision as of 05:27, 21 November 2012
Short description: | p1@LOC100128054 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC100128054_5end |
Coexpression cluster: | C1602_mesothelioma_Adipocyte_Preadipocyte_bone_Smooth_papillary_Cardiac |
Association with transcript: | 5bp_to_NR_033969, uc001kjo.1_5end |
EntrezGene: | LOC100128054 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.95e-10 | 12 |
smooth muscle cell of the brain vasculature | 2.40e-09 | 3 |
preadipocyte of the breast | 2.67e-09 | 3 |
adipocyte of omentum tissue | 3.14e-09 | 3 |
omentum preadipocyte | 5.97e-09 | 3 |
retinal pigment epithelial cell | 1.78e-08 | 3 |
leptomeningeal cell | 5.82e-08 | 3 |
extraembryonic cell | 3.44e-07 | 19 |
extracellular matrix secreting cell | 4.62e-07 | 15 |
adipocyte of breast | 5.18e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.76e-16 | 6 |
peritoneum | 1.76e-16 | 6 |
abdominal cavity | 1.76e-16 | 6 |
visceral peritoneum | 1.76e-16 | 6 |
cavity lining | 3.05e-10 | 12 |
serous membrane | 3.05e-10 | 12 |
pigmented layer of retina | 1.78e-08 | 3 |
presumptive retinal pigmented epithelium | 1.78e-08 | 3 |
organ component layer | 3.62e-08 | 66 |
blood-cerebrospinal fluid barrier | 5.82e-08 | 3 |
retina | 3.22e-07 | 6 |
photoreceptor array | 3.22e-07 | 6 |
posterior segment of eyeball | 3.22e-07 | 6 |
breast | 4.73e-07 | 10 |
extraembryonic structure | 5.89e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.