FFCP PHASE1:Hg19::chr15:68595021..68595035,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.60e-23!180;CL:0000057!1.88e-19!75;CL:0002620!1.01e-10!23;CL:0000048!1.26e-09!430;CL:0000723!4.06e-09!436;CL:0000034!1.81e-08!444;CL:0000499!1.68e-07!27;CL:0002320!2.33e-07!365;CL:0000153!2.42e-07!9;CL:0000447!2.42e-07!9;CL:0002334!2.99e-07!12;CL:0000134!3.65e-07!358;CL:0000219!4.63e-07!390 | |ontology_enrichment_celltype=CL:0000055!1.60e-23!180;CL:0000057!1.88e-19!75;CL:0002620!1.01e-10!23;CL:0000048!1.26e-09!430;CL:0000723!4.06e-09!436;CL:0000034!1.81e-08!444;CL:0000499!1.68e-07!27;CL:0002320!2.33e-07!365;CL:0000153!2.42e-07!9;CL:0000447!2.42e-07!9;CL:0002334!2.99e-07!12;CL:0000134!3.65e-07!358;CL:0000219!4.63e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.10e-19;23!CL:0000153;8.25e-12;9!CL:0000447;8.25e-12;9!CL:0002580;4.40e-11;3!CL:0002579;4.55e-11;3!CL:0002615;1.32e-10;3!CL:0000135;2.48e-10;3!CL:0000388;2.48e-10;3!CL:0002334;8.66e-10;12!CL:0000499;3.74e-09;28!CL:0000327;3.78e-09;15!CL:0000138;2.07e-08;6!CL:0000136;2.46e-08;13!CL:0000197;5.84e-08;6!CL:0000098;5.84e-08;6!CL:0002167;5.84e-08;6!CL:0002617;1.41e-07;2!CL:0000057;9.23e-07;73 | |ontology_enrichment_celltype_v019=CL:0002620;1.10e-19;23!CL:0000153;8.25e-12;9!CL:0000447;8.25e-12;9!CL:0002580;4.40e-11;3!CL:0002579;4.55e-11;3!CL:0002615;1.32e-10;3!CL:0000135;2.48e-10;3!CL:0000388;2.48e-10;3!CL:0002334;8.66e-10;12!CL:0000499;3.74e-09;28!CL:0000327;3.78e-09;15!CL:0000138;2.07e-08;6!CL:0000136;2.46e-08;13!CL:0000197;5.84e-08;6!CL:0000098;5.84e-08;6!CL:0002167;5.84e-08;6!CL:0002617;1.41e-07;2!CL:0000057;9.23e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.96e-21,76;CL:0002620,8.85e-20,23;CL:0000136,3.39e-12,15;CL:0000153,8.96e-12,9;CL:0000447,8.96e-12,9;CL:0002320,9.62e-12,361;CL:0000134,1.68e-11,354;CL:0002579,4.20e-11,3;CL:0002580,4.34e-11,3;CL:0002615,1.43e-10,3;CL:0000135,2.95e-10,3;CL:0000388,2.95e-10,3;CL:0002334,8.30e-10,12;CL:0000219,1.93e-09,386;CL:0000048,2.50e-09,427;CL:0000327,3.84e-09,15;CL:0000499,4.00e-09,28;CL:0000723,5.01e-09,433;CL:0000034,1.23e-08,441;CL:0000058,2.12e-08,6;CL:0000138,2.12e-08,6;CL:0000197,7.71e-08,6;CL:0000098,7.71e-08,6;CL:0002167,7.71e-08,6;CL:0002617,1.55e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!1.01e-07!5;DOID:450!1.01e-07!5;DOID:66!1.01e-07!5;DOID:423!1.01e-07!5;DOID:0080000!1.01e-07!5;DOID:11722!1.01e-07!5 | |ontology_enrichment_disease=DOID:17!1.01e-07!5;DOID:450!1.01e-07!5;DOID:66!1.01e-07!5;DOID:423!1.01e-07!5;DOID:0080000!1.01e-07!5;DOID:11722!1.01e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;8.42e-15;5!DOID:450;8.42e-15;5!DOID:66;8.42e-15;5!DOID:423;8.42e-15;5!DOID:0080000;8.42e-15;5!DOID:11722;8.42e-15;5 | |ontology_enrichment_disease_v019=DOID:17;8.42e-15;5!DOID:450;8.42e-15;5!DOID:66;8.42e-15;5!DOID:423;8.42e-15;5!DOID:0080000;8.42e-15;5!DOID:11722;8.42e-15;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,4.38e-15,5;DOID:450,4.38e-15,5;DOID:66,4.38e-15,5;DOID:423,4.38e-15,5;DOID:0080000,4.38e-15,5;DOID:11722,4.38e-15,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!6.16e-10!6;UBERON:0002358!6.16e-10!6;UBERON:0003684!6.16e-10!6;UBERON:0001178!6.16e-10!6;UBERON:0002384!3.96e-08!375;UBERON:0004457!1.60e-07!12;UBERON:0000042!1.60e-07!12;UBERON:0002097!6.84e-07!40 | |ontology_enrichment_uberon=UBERON:0003688!6.16e-10!6;UBERON:0002358!6.16e-10!6;UBERON:0003684!6.16e-10!6;UBERON:0001178!6.16e-10!6;UBERON:0002384!3.96e-08!375;UBERON:0004457!1.60e-07!12;UBERON:0000042!1.60e-07!12;UBERON:0002097!6.84e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.13e-22;9!UBERON:0000042;2.13e-22;9!UBERON:0003688;6.05e-20;6!UBERON:0002358;6.05e-20;6!UBERON:0003684;6.05e-20;6!UBERON:0001178;6.05e-20;6!UBERON:0002097;1.33e-10;41!UBERON:0007846;2.48e-10;3!UBERON:0000043;2.48e-10;3!UBERON:0007845;2.48e-10;3!UBERON:0002199;2.41e-08;46!UBERON:0002416;2.41e-08;46!UBERON:0000310;2.95e-08;10!UBERON:0001443;1.83e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0004457;2.13e-22;9!UBERON:0000042;2.13e-22;9!UBERON:0003688;6.05e-20;6!UBERON:0002358;6.05e-20;6!UBERON:0003684;6.05e-20;6!UBERON:0001178;6.05e-20;6!UBERON:0002097;1.33e-10;41!UBERON:0007846;2.48e-10;3!UBERON:0000043;2.48e-10;3!UBERON:0007845;2.48e-10;3!UBERON:0002199;2.41e-08;46!UBERON:0002416;2.41e-08;46!UBERON:0000310;2.95e-08;10!UBERON:0001443;1.83e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.09e-20,6;UBERON:0002358,6.09e-20,6;UBERON:0003684,6.09e-20,6;UBERON:0001178,6.09e-20,6;UBERON:0004457,2.19e-16,12;UBERON:0000042,2.19e-16,12;UBERON:0002097,2.42e-13,41;UBERON:0002384,6.76e-12,371;UBERON:0002199,1.68e-11,46;UBERON:0002416,1.68e-11,46;UBERON:0007846,2.95e-10,3;UBERON:0000043,2.95e-10,3;UBERON:0007845,2.95e-10,3;UBERON:0000310,3.07e-08,10;UBERON:0001443,1.90e-07,11 | |||
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| ||
|short_description=p@chr15:68595021..68595035,- | |short_description=p@chr15:68595021..68595035,- | ||
}} | }} |
Revision as of 09:28, 21 November 2012
Short description: | p@chr15:68595021..68595035, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:68595021..68595035, - |
Coexpression cluster: | C836_Preadipocyte_osteoclastoma_Ewing_Fibroblast_Adipocyte_Osteoblast_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.96e-21 | 76 |
skin fibroblast | 8.85e-20 | 23 |
fat cell | 3.39e-12 | 15 |
GAG secreting cell | 8.96e-12 | 9 |
carbohydrate secreting cell | 8.96e-12 | 9 |
connective tissue cell | 9.62e-12 | 361 |
mesenchymal cell | 1.68e-11 | 354 |
omentum preadipocyte | 4.20e-11 | 3 |
preadipocyte of the breast | 4.34e-11 | 3 |
adipocyte of omentum tissue | 1.43e-10 | 3 |
fibrocyte | 2.95e-10 | 3 |
tendon cell | 2.95e-10 | 3 |
preadipocyte | 8.30e-10 | 12 |
motile cell | 1.93e-09 | 386 |
multi fate stem cell | 2.50e-09 | 427 |
extracellular matrix secreting cell | 3.84e-09 | 15 |
stromal cell | 4.00e-09 | 28 |
somatic stem cell | 5.01e-09 | 433 |
stem cell | 1.23e-08 | 441 |
chondroblast | 2.12e-08 | 6 |
chondrocyte | 2.12e-08 | 6 |
receptor cell | 7.71e-08 | 6 |
sensory epithelial cell | 7.71e-08 | 6 |
olfactory epithelial cell | 7.71e-08 | 6 |
adipocyte of breast | 1.55e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.09e-20 | 6 |
peritoneum | 6.09e-20 | 6 |
abdominal cavity | 6.09e-20 | 6 |
visceral peritoneum | 6.09e-20 | 6 |
cavity lining | 2.19e-16 | 12 |
serous membrane | 2.19e-16 | 12 |
skin of body | 2.42e-13 | 41 |
connective tissue | 6.76e-12 | 371 |
integument | 1.68e-11 | 46 |
integumental system | 1.68e-11 | 46 |
dense regular connective tissue | 2.95e-10 | 3 |
tendon | 2.95e-10 | 3 |
regular connective tissue | 2.95e-10 | 3 |
breast | 3.07e-08 | 10 |
chest | 1.90e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.38e-15 | 5 |
myotonic disease | 4.38e-15 | 5 |
muscle tissue disease | 4.38e-15 | 5 |
myopathy | 4.38e-15 | 5 |
muscular disease | 4.38e-15 | 5 |
myotonic dystrophy | 4.38e-15 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.