FFCP PHASE1:Hg19::chr12:10999851..10999880,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.04e-16;1!UBERON:0008801;1.41e-16;1!UBERON:0000358;1.93e-16;1!UBERON:0006965;4.02e-09;2 | |ontology_enrichment_development_v019=UBERON:0006298;1.04e-16;1!UBERON:0008801;1.41e-16;1!UBERON:0000358;1.93e-16;1!UBERON:0006965;4.02e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.90e-09!115;UBERON:0003127!1.17e-07!2;UBERON:0001829!1.41e-07!2;UBERON:0000341!1.50e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!1.90e-09!115;UBERON:0003127!1.17e-07!2;UBERON:0001829!1.41e-07!2;UBERON:0000341!1.50e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;7.33e-32;2!UBERON:0001829;1.87e-31;2!UBERON:0001044;1.24e-23;6!UBERON:0003293;1.24e-23;6!UBERON:0003294;1.24e-23;6!UBERON:0010047;1.24e-23;6!UBERON:0003408;1.24e-23;6!UBERON:0000167;1.24e-23;6!UBERON:0001736;1.04e-16;1!UBERON:0001831;1.41e-16;1!UBERON:0001567;1.41e-16;1!UBERON:0002372;2.84e-16;1!UBERON:0001961;2.84e-16;1!UBERON:0001744;2.84e-16;1!UBERON:0001042;2.84e-16;1!UBERON:0001735;2.84e-16;1!UBERON:0000165;1.35e-13;28!UBERON:0000161;3.65e-13;19!UBERON:0000166;3.65e-13;19!UBERON:0001041;1.67e-10;14!UBERON:0003126;7.99e-10;7!UBERON:0001005;7.99e-10;7!UBERON:0000341;3.71e-09;2!UBERON:0004089;5.94e-09;2!UBERON:0006562;8.41e-09;2!UBERON:0000153;2.00e-07;54!UBERON:0007811;9.07e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0003127;7.33e-32;2!UBERON:0001829;1.87e-31;2!UBERON:0001044;1.24e-23;6!UBERON:0003293;1.24e-23;6!UBERON:0003294;1.24e-23;6!UBERON:0010047;1.24e-23;6!UBERON:0003408;1.24e-23;6!UBERON:0000167;1.24e-23;6!UBERON:0001736;1.04e-16;1!UBERON:0001831;1.41e-16;1!UBERON:0001567;1.41e-16;1!UBERON:0002372;2.84e-16;1!UBERON:0001961;2.84e-16;1!UBERON:0001744;2.84e-16;1!UBERON:0001042;2.84e-16;1!UBERON:0001735;2.84e-16;1!UBERON:0000165;1.35e-13;28!UBERON:0000161;3.65e-13;19!UBERON:0000166;3.65e-13;19!UBERON:0001041;1.67e-10;14!UBERON:0003126;7.99e-10;7!UBERON:0001005;7.99e-10;7!UBERON:0000341;3.71e-09;2!UBERON:0004089;5.94e-09;2!UBERON:0006562;8.41e-09;2!UBERON:0000153;2.00e-07;54!UBERON:0007811;9.07e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,7.33e-32,2;UBERON:0001829,1.87e-31,2;UBERON:0001044,1.24e-23,6;UBERON:0003293,1.24e-23,6;UBERON:0003294,1.24e-23,6;UBERON:0010047,1.24e-23,6;UBERON:0000167,1.24e-23,6;UBERON:0000166,2.77e-17,22;UBERON:0001736,1.04e-16,1;UBERON:0006298,1.04e-16,1;UBERON:0001831,1.41e-16,1;UBERON:0001567,1.41e-16,1;UBERON:0008801,1.41e-16,1;UBERON:0002372,2.63e-16,1;UBERON:0001961,2.63e-16,1;UBERON:0001744,2.63e-16,1;UBERON:0001735,2.63e-16,1;UBERON:0003408,1.85e-14,10;UBERON:0000165,3.95e-13,29;UBERON:0000930,3.95e-13,29;UBERON:0001004,1.45e-12,74;UBERON:0001041,1.37e-10,87;UBERON:0000161,1.39e-10,36;UBERON:0003126,7.99e-10,7;UBERON:0001005,7.99e-10,7;UBERON:0000341,3.71e-09,2;UBERON:0004089,5.94e-09,2;UBERON:0000153,1.24e-08,62;UBERON:0007811,1.24e-08,62;UBERON:0007023,5.52e-08,114;UBERON:0001444,9.06e-08,49;UBERON:0004921,1.49e-07,118;UBERON:0000065,4.74e-07,54;UBERON:0001042,6.50e-07,10;UBERON:0009145,6.50e-07,10;UBERON:0000033,8.61e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.4661419086904,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0,0.290967049465258,0,11.2990370390266,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.196854963029498,0.0846733320657845,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,2.56289790162467,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,3.83780436800028,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,16.7788669939908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,8.71585638468627,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,51.6026236200374,0.952257725854961,0,0,0,0,0,0.435433495793923,1.02669990325584,1.0776328482334,138.997634051007,7.98384855710432,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.4661419086904,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0,0.290967049465258,0,11.2990370390266,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.196854963029498,0.0846733320657845,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,2.56289790162467,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,3.83780436800028,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,16.7788669939908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,8.71585638468627,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,51.6026236200374,0.952257725854961,0,0,0,0,0,0.435433495793923,1.02669990325584,1.0776328482334,138.997634051007,7.98384855710432,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr12:10999851..10999880,+ | |short_description=p@chr12:10999851..10999880,+ | ||
}} | }} |
Revision as of 11:42, 21 November 2012
Short description: | p@chr12:10999851..10999880, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:10999851..10999880, + |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 7.33e-32 | 2 |
major salivary gland | 1.87e-31 | 2 |
saliva-secreting gland | 1.24e-23 | 6 |
gland of oral region | 1.24e-23 | 6 |
gland of foregut | 1.24e-23 | 6 |
oral gland | 1.24e-23 | 6 |
oral cavity | 1.24e-23 | 6 |
oral opening | 2.77e-17 | 22 |
submandibular gland | 1.04e-16 | 1 |
submandibular gland primordium | 1.04e-16 | 1 |
parotid gland | 1.41e-16 | 1 |
cheek | 1.41e-16 | 1 |
parotid gland primordium | 1.41e-16 | 1 |
tonsil | 2.63e-16 | 1 |
mucosa-associated lymphoid tissue | 2.63e-16 | 1 |
lymphoid tissue | 2.63e-16 | 1 |
tonsillar ring | 2.63e-16 | 1 |
gland of gut | 1.85e-14 | 10 |
mouth | 3.95e-13 | 29 |
stomodeum | 3.95e-13 | 29 |
respiratory system | 1.45e-12 | 74 |
foregut | 1.37e-10 | 87 |
orifice | 1.39e-10 | 36 |
trachea | 7.99e-10 | 7 |
respiratory airway | 7.99e-10 | 7 |
throat | 3.71e-09 | 2 |
midface | 5.94e-09 | 2 |
anterior region of body | 1.24e-08 | 62 |
craniocervical region | 1.24e-08 | 62 |
adult organism | 5.52e-08 | 114 |
subdivision of head | 9.06e-08 | 49 |
subdivision of digestive tract | 1.49e-07 | 118 |
respiratory tract | 4.74e-07 | 54 |
chordate pharynx | 6.50e-07 | 10 |
pharyngeal region of foregut | 6.50e-07 | 10 |
head | 8.61e-07 | 56 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.