UBERON:0000000: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 22: | Line 22: | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
| | |anatomical_img_id=FMA:20394 | ||
}} | }} | ||
Revision as of 20:40, 1 December 2012
| Name: | processual entity |
|---|---|
| Definition: | "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity] |
| Subset: | upper_level |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| disjoint_from: | UBERON:0001062(anatomical entity) |
|---|
Children
| is a: | UBERON:0000105 (life cycle stage) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10352-105E1 (medial frontal gyrus, newborn, donor10223)
- 10353-105E2 (medial temporal gyrus, newborn, donor10223)
- 10354-105E3 (caudate nucleus, newborn, donor10223)
- 10355-105E4 (occipital cortex, newborn, donor10223)
- 10356-105E5 (parietal lobe, newborn, donor10223)
- 10357-105E6 (cerebellum, newborn, donor10223)
- 10358-105E7 (substantia nigra, newborn, donor10223)
- 10359-105E8 (spinal cord, newborn, donor10223)
- 10360-105E9 (amygdala, newborn, donor10223)
- 10361-105F1 (medulla oblongata, newborn, donor10223)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000000 (processual entity), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
