NonredundantMotifs:30: Difference between revisions
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|entrez_gene_id=51222
|motif_cluster_2013_march_motif_members= /HOCOMOCO:ZN219_f1~GLIS3_f1~PLAL1_si~PLAG1_si /UNIPROBE:Zfp740_primary;SCI09~Zfp281_primary;SC...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;3.861386138613874;4.2904290429042895;13.214521452145206;4.633663366336628!2;11.584158415841596;0.8151815181518164;7.379537953795384;6.221122112211214!3;0.7722772277227723;0.38613861386138737;22.91089108910893;1.9306930693069317!4;0.0;2.3168316831683167;22.91089108910893;0.7722772277227723!5;0.0;0.38613861386138737;20.59405940594059;5.019801980198018!6;0.429042904290429;0.7722772277227723;24.02640264026405;0.7722772277227723!7;0.0;0.38613861386138737;25.227722772277247;0.38613861386138737!8;0.38613861386138737;0.0;25.613861386138637;0.0!9;0.8151815181518164;11.240924092409232;3.9042904290429004;10.039603960396036!10;1.1584158415841597;4.633663366336628;19.435643564356447;0.7722772277227723!11;0.0;1.1584158415841597;23.683168316831686;1.1584158415841597!12;14.855610561056096;3.228547854785474;1.6410891089108908;6.2747524752475154 | |||
|entrez_gene_id=51222 | |entrez_gene_id=51222 | ||
|motif_cluster_2013_march_motif_members= | |motif_cluster_2013_march_motif_members= /UNIPROBE:Zfp740_primary;SCI09~Zfp281_primary;SCI09~Zfp740_secondary;SCI09~Zfp281_secondary;SCI09~Zbtb7b_primary;SCI09~Glis2_primary;SCI09~Plagl1_primary;SCI09~Plagl1_secondary;SCI09 /HOCOMOCO:ZN219_f1~GLIS3_f1~PLAL1_si~PLAG1_si | ||
|name=known30 | |name=known30 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
Revision as of 10:46, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known30
- db :HOCOMOCO
- Id :ZN219_f1
- name :
- score :3.2574642583338225
- External refs:
- Internal refs:
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Sub Motif Members
