FFCP PHASE1:Hg19::chr14:24553835..24553850,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4901 | |EntrezGene=4901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8002 | |HGNC=8002 | ||
|TSSclassifier=W | |||
|UniProt=P54845 | |UniProt=P54845 | ||
|association_with_transcript=-1bp_to_ENST00000397002_5end | |association_with_transcript=-1bp_to_ENST00000397002_5end | ||
Revision as of 17:39, 6 July 2013
| Short description: | p1@NRL |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_NRL_5end |
| Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
| Association with transcript: | -1bp_to_ENST00000397002_5end |
| EntrezGene: | NRL |
| HGNC: | 8002 |
| UniProt: | P54845 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@NRL |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| crystallin accumulating cell | 8.14e-07 | 4 |
| vertebrate lens cell | 8.14e-07 | 4 |
| lens epithelial cell | 8.14e-07 | 4 |
| Ontology term | p-value | n |
|---|---|---|
| epididymis | 3.28e-23 | 1 |
| eye | 2.38e-17 | 21 |
| visual system | 2.38e-17 | 21 |
| retina | 7.79e-16 | 6 |
| photoreceptor array | 7.79e-16 | 6 |
| posterior segment of eyeball | 7.79e-16 | 6 |
| sense organ | 3.06e-15 | 24 |
| sensory system | 3.06e-15 | 24 |
| entire sense organ system | 3.06e-15 | 24 |
| pineal body | 3.62e-12 | 2 |
| Ontology term | p-value | n |
|---|---|---|
| nervous system cancer | 2.29e-08 | 11 |
| lung small cell carcinoma | 9.11e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
