FFCP PHASE1:Hg19::chr15:56657750..56657757,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=374618 | |EntrezGene=374618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29585 | |HGNC=29585 | ||
|TSSclassifier=S | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000558083_5end | |association_with_transcript=-19bp_to_ENST00000558083_5end | ||
Revision as of 21:50, 6 July 2013
| Short description: | p6@TEX9 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_TEX9_5end |
| Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
| Association with transcript: | -19bp_to_ENST00000558083_5end |
| EntrezGene: | TEX9 |
| HGNC: | 29585 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@TEX9 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte of B lineage | 7.55e-55 | 24 |
| pro-B cell | 7.55e-55 | 24 |
| lymphoid lineage restricted progenitor cell | 4.62e-25 | 52 |
| lymphocyte | 1.41e-24 | 53 |
| common lymphoid progenitor | 1.41e-24 | 53 |
| B cell | 4.09e-19 | 14 |
| antibody secreting cell | 4.44e-18 | 1 |
| plasma cell | 4.44e-18 | 1 |
| plasmablast | 4.44e-18 | 1 |
| nongranular leukocyte | 7.14e-11 | 115 |
| Ontology term | p-value | n |
|---|---|---|
| spleen | 8.99e-23 | 3 |
| gastrointestinal system mesentery | 8.99e-23 | 3 |
| stomach region | 8.99e-23 | 3 |
| mesentery | 8.99e-23 | 3 |
| gastrointestinal system serosa | 8.99e-23 | 3 |
| mesentery of stomach | 8.99e-23 | 3 |
| gut mesentery | 8.99e-23 | 3 |
| dorsal mesentery | 8.99e-23 | 3 |
| dorsal mesogastrium | 8.99e-23 | 3 |
| peritoneal cavity | 8.99e-23 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| lymphoma | 5.94e-27 | 10 |
| genetic disease | 3.16e-18 | 1 |
| monogenic disease | 3.16e-18 | 1 |
| xeroderma pigmentosum | 3.16e-18 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
