FFCP PHASE1:Hg19::chr10:102891044..102891047,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3195|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5056|TSSclassifier=S|UniProt=A1L4G3,P31314|association_with_transcript=-13bp_to_ENST00000467928,NM_001195517,NM_005521,uc001ksw.2_5end|coexpression_cluster_id=C253|description=CAGE_peak_6_at_TLX1_5end|id=chr10:102891044..102891047,+|ontology_enrichment_celltype=CL:0002573!6.32e-11!2;CL:0000167!3.88e-09!1;CL:0000164!3.88e-09!1;CL:0000502!3.88e-09!1;CL:0000172!3.88e-09!1;CL:0000173!3.88e-09!1;CL:0002351!3.88e-09!1;CL:0000243!3.06e-07!15;CL:0000125!3.06e-07!15;CL:0000030!3.06e-07!15;CL:0000339!3.06e-07!15|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004872;1.78e-29;7|ontology_enrichment_disease=DOID:4430!3.88e-09!1;DOID:4362!2.97e-07!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!8.80e-12!3;UBERON:0004854!8.80e-12!3;UBERON:0009034!8.80e-12!3;UBERON:0002095!8.80e-12!3;UBERON:0004782!8.80e-12!3;UBERON:0003281!8.80e-12!3;UBERON:0009664!8.80e-12!3;UBERON:0002296!8.80e-12!3;UBERON:0005602!8.80e-12!3;UBERON:0001179!8.80e-12!3;UBERON:0006293!8.80e-12!3;UBERON:0000945!1.39e-09!8;UBERON:0010039!1.39e-09!8;UBERON:0002363!1.16e-08!1;UBERON:0007647!1.16e-08!1;UBERON:0010115!1.16e-08!1|ontology_enrichment_uberon_v019=UBERON:0002106;2.39e-66;3!UBERON:0004177;1.48e-40;5!UBERON:0005057;1.48e-40;5!UBERON:0002075;1.85e-12;18!UBERON:0000077;8.32e-09;27!UBERON:0002405;8.32e-09;27!UBERON:0002390;4.53e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.39e-66,3;UBERON:0004854,2.39e-66,3;UBERON:0009034,2.39e-66,3;UBERON:0002095,2.39e-66,3;UBERON:0004782,2.39e-66,3;UBERON:0003281,2.39e-66,3;UBERON:0009664,2.39e-66,3;UBERON:0002296,2.39e-66,3;UBERON:0005602,2.39e-66,3;UBERON:0001179,2.39e-66,3;UBERON:0006293,2.39e-66,3;UBERON:0004177,1.78e-29,7;UBERON:0005057,1.78e-29,7;UBERON:0000945,5.22e-26,8;UBERON:0010039,5.22e-26,8;UBERON:0004457,6.76e-18,12;UBERON:0000042,6.76e-18,12;UBERON:0003887,6.76e-18,12;UBERON:0002075,1.85e-12,18;UBERON:0005409,4.34e-09,25;UBERON:0000077,2.67e-08,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0.813689977576877,0.173858272302579,0,0,0,0,0.860454717640555,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0.118920090777569,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0.751871343838829,2.06265241515447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@TLX1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3195 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5056 | |||
|TSSclassifier=S | |||
|UniProt=A1L4G3,P31314 | |||
|association_with_transcript=-13bp_to_ENST00000467928,NM_001195517,NM_005521,uc001ksw.2_5end | |||
|coexpression_cluster_id=C253 | |||
|description=CAGE_peak_6_at_TLX1_5end | |||
|id=chr10:102891044..102891047,+ | |||
|ontology_enrichment_celltype=CL:0002573!6.32e-11!2;CL:0000167!3.88e-09!1;CL:0000164!3.88e-09!1;CL:0000502!3.88e-09!1;CL:0000172!3.88e-09!1;CL:0000173!3.88e-09!1;CL:0002351!3.88e-09!1;CL:0000243!3.06e-07!15;CL:0000125!3.06e-07!15;CL:0000030!3.06e-07!15;CL:0000339!3.06e-07!15 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.78e-29;7 | |||
|ontology_enrichment_disease=DOID:4430!3.88e-09!1;DOID:4362!2.97e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!8.80e-12!3;UBERON:0004854!8.80e-12!3;UBERON:0009034!8.80e-12!3;UBERON:0002095!8.80e-12!3;UBERON:0004782!8.80e-12!3;UBERON:0003281!8.80e-12!3;UBERON:0009664!8.80e-12!3;UBERON:0002296!8.80e-12!3;UBERON:0005602!8.80e-12!3;UBERON:0001179!8.80e-12!3;UBERON:0006293!8.80e-12!3;UBERON:0000945!1.39e-09!8;UBERON:0010039!1.39e-09!8;UBERON:0002363!1.16e-08!1;UBERON:0007647!1.16e-08!1;UBERON:0010115!1.16e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.39e-66;3!UBERON:0004177;1.48e-40;5!UBERON:0005057;1.48e-40;5!UBERON:0002075;1.85e-12;18!UBERON:0000077;8.32e-09;27!UBERON:0002405;8.32e-09;27!UBERON:0002390;4.53e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.39e-66,3;UBERON:0004854,2.39e-66,3;UBERON:0009034,2.39e-66,3;UBERON:0002095,2.39e-66,3;UBERON:0004782,2.39e-66,3;UBERON:0003281,2.39e-66,3;UBERON:0009664,2.39e-66,3;UBERON:0002296,2.39e-66,3;UBERON:0005602,2.39e-66,3;UBERON:0001179,2.39e-66,3;UBERON:0006293,2.39e-66,3;UBERON:0004177,1.78e-29,7;UBERON:0005057,1.78e-29,7;UBERON:0000945,5.22e-26,8;UBERON:0010039,5.22e-26,8;UBERON:0004457,6.76e-18,12;UBERON:0000042,6.76e-18,12;UBERON:0003887,6.76e-18,12;UBERON:0002075,1.85e-12,18;UBERON:0005409,4.34e-09,25;UBERON:0000077,2.67e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0.813689977576877,0.173858272302579,0,0,0,0,0.860454717640555,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0.118920090777569,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0.751871343838829,2.06265241515447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@TLX1 | |||
}} |
Revision as of 11:21, 10 September 2013
Short description: | p6@TLX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TLX1_5end |
Coexpression cluster: | C253_spleen_rhabdomyosarcoma_Hepatocyte_small_uterus_liver_rectum |
Association with transcript: | -13bp_to_ENST00000467928, NM_001195517, NM_005521, uc001ksw.2_5end |
EntrezGene: | TLX1 |
HGNC: | 5056 |
UniProt: | A1L4G3P31314 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 2.39e-66 | 3 |
gastrointestinal system mesentery | 2.39e-66 | 3 |
stomach region | 2.39e-66 | 3 |
mesentery | 2.39e-66 | 3 |
gastrointestinal system serosa | 2.39e-66 | 3 |
mesentery of stomach | 2.39e-66 | 3 |
gut mesentery | 2.39e-66 | 3 |
dorsal mesentery | 2.39e-66 | 3 |
dorsal mesogastrium | 2.39e-66 | 3 |
peritoneal cavity | 2.39e-66 | 3 |
spleen primordium | 2.39e-66 | 3 |
hemopoietic organ | 1.78e-29 | 7 |
immune organ | 1.78e-29 | 7 |
stomach | 5.22e-26 | 8 |
food storage organ | 5.22e-26 | 8 |
cavity lining | 6.76e-18 | 12 |
serous membrane | 6.76e-18 | 12 |
intraembryonic coelom | 6.76e-18 | 12 |
viscus | 1.85e-12 | 18 |
gastrointestinal system | 4.34e-09 | 25 |
mixed endoderm/mesoderm-derived structure | 2.67e-08 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.