FFCP PHASE1:Hg19::chr10:8095593..8095625,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2625|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4172|TSSclassifier=S|UniProt=|association_with_transcript=26bp_to_ENST00000481743_5end|description=CAGE_peak_3_at_GATA3_5end|id=chr10:8095593..8095625,+|ontology_enrichment_celltype=CL:0000066!4.56e-10!254;CL:0000084!1.13e-09!25;CL:0000827!1.13e-09!25;CL:0000076!1.21e-09!62;CL:0000791!1.06e-07!18;CL:0000789!1.06e-07!18;CL:0002420!1.06e-07!18;CL:0002419!1.06e-07!18;CL:0000790!1.06e-07!18|ontology_enrichment_celltype_v019=CL:0000084;3.99e-13;25!CL:0000791;3.48e-10;18!CL:0000789;3.48e-10;18!CL:0002419;3.48e-10;18|ontology_enrichment_celltype_v019_2=CL:0000084,4.04e-13,25;CL:0000827,4.04e-13,25;CL:0000076,4.00e-12,63;CL:0000791,3.66e-10,18;CL:0000789,3.66e-10,18;CL:0002420,3.66e-10,18;CL:0002419,3.66e-10,18;CL:0000790,3.66e-10,18;CL:0000066,1.12e-09,253|ontology_enrichment_development_v019=CL:0000790;3.48e-10;18|ontology_enrichment_disease=DOID:0050687!9.67e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:0050687,4.18e-07,143|ontology_enrichment_uberon=UBERON:0005631!4.41e-07!14;UBERON:0000158!4.41e-07!14|ontology_enrichment_uberon_v019=UBERON:0000478;9.35e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.06e-09,14;UBERON:0000158,1.06e-09,14;UBERON:0001008,5.00e-08,48;UBERON:0003124,7.31e-08,7;UBERON:0006554,1.58e-07,47;UBERON:0000077,8.83e-07,29;UBERON:0000478,9.67e-07,24|phase1_expression=0.726713517082227,0.428201047781966,0.704772020479856,0,0.446961094427288,0,0,0,0,0.491467873003018,0,10.4851858622483,8.96807725976742,0.618831764800233,1.98838425436749,0,0,0,0,0,0,0,0,0.547497700291537,0.502170558379211,0.152826811495903,0,0.236132343941038,0.786728553697808,0.767658796194425,0.928896739896456,0,0.6024118375565,0.369754010166788,0,0,0.293600439334847,0,0.802177789880567,1.73608696572681,0,1.29557466407592,0,0,0,0.485168122375632,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.641858054152187,0,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,5.90129310341499,3.93010762749165,6.7848494669838,4.34684888015763,2.60737813306872,1.89379122293893,5.84480185223734,28.5210769626044,7.07054177939609,6.64601683750863,4.60366568400527,11.5282187753108,11.705341280389,11.675091226861,16.5810010671509,8.98389565778663,2.96573126324121,2.40786745280742,3.1360657141493,7.59172596073693,3.06576394881537,4.46715679127419,4.80737414837055,5.09704662918555,6.51083453856419,0,4.66782869141096,3.4556385011693,3.74792179657038,5.20909954496837,2.46338399076314,6.45141578319144,5.08136371988664,3.62061009706997,0,1.34140171940727,0.895037932904712,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.589405839739707,4.00724817121796,1.11235332835329,0,0.174129737299267,0.132957960518865,0,0,0,2.98143611050058,0.860234595106124,1.73570250803797,1.69592382577203,1.67799774483962,1.10047216776027,1.25396979922086,0.258416759169329,0.71153252537342,0.66944122552934,2.41697590265488,0,1.46437234528902,2.20597848207521,1.62028389576352,2.23249320710199,2.2452937262617,1.57656072676651,6.13266549863533,7.59412527654503,1.83201743930407,0,0,1.3082821564276,0,0.12663051166458,0.132409180813219,0,0,1.12135520028461,2.1349799145941,0.49333509683432,0,0.808264032418128,0.163461903113459,0,0,0.234321431833797,0,1.1409436430889,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,1.82032272387605,2.87447256726495,0,0,0.277064115484183,0,0,0,0.340296549480063,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,1.06502877754984,0.503760491138201,0,0.386521706326594,0.272746120590835,1.14721838155602,0.121973706129595,0,0.232387885739037,0.725627385107593,0.504641701751257,0,0,0,0,0,0,1.0647612003586,1.85443159085912,0.723033089650446,0.772057809126758,1.08939722046203,0.474541238222193,0.269662616320329,0.784885860501384,1.15424147083917,0,4.20725321410337,0,0,0,0,0,19.4243763742446,9.47010976781974,0.343135620597051,7.35326912237791,7.86812272803337,4.62433273093502,0,0.325808305310325,0,0,0.463721619900307,0,0,0,0.380508304469197,48.2024682755158,36.0564188079846,0,0,0.148631162288728,0,0.16798212819886,0,4.83616022595381,3.48760726216754,6.51750554580859,3.94130590316755,0.352193736052904,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0.821905290201534,0,6.61302349561811,4.13764596424047,5.60631694634745,3.20857590699371,0,0,0,0,0,0,0,0.414415513436035,1.34960640891054,2.00068208423871,0.271265023699736,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0.553107505625109,0,0,0,2.06768026122887,1.72571360654893,0.960548020230999,14.2469958579742,11.6504807657348,17.2362467197918,0,0.153461973288062,0,0,0,0.482561763430822,0,0,0,0,0,0,10.6356315640628,7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05973866,0,0,0,0,0,0,0,0.437062287854782,40.9236158266941,1.1218771271618,0.801652215796681,0.918948995348449,0,0.757786982182394,0.535928260312357,0,0.103432995861895,0.852935927603924,1.42838658878244,11.8197704999891,13.7185118593846,0.897054900644907,1.65482611523229,2.62752345645685,0,0.684466602170562,0.80822463617505,0.78894425931944,0.332660356546013,5.69822880276822,0.960546112899439,0,5.12003652007545,0,0.244482888365733,0.813792356631477,7.32332451604064,1.20764276154616,1.28227396921293|short_description=p3@GATA3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2625 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4172 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=26bp_to_ENST00000481743_5end | |||
|description=CAGE_peak_3_at_GATA3_5end | |||
|id=chr10:8095593..8095625,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.56e-10!254;CL:0000084!1.13e-09!25;CL:0000827!1.13e-09!25;CL:0000076!1.21e-09!62;CL:0000791!1.06e-07!18;CL:0000789!1.06e-07!18;CL:0002420!1.06e-07!18;CL:0002419!1.06e-07!18;CL:0000790!1.06e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.99e-13;25!CL:0000791;3.48e-10;18!CL:0000789;3.48e-10;18!CL:0002419;3.48e-10;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.04e-13,25;CL:0000827,4.04e-13,25;CL:0000076,4.00e-12,63;CL:0000791,3.66e-10,18;CL:0000789,3.66e-10,18;CL:0002420,3.66e-10,18;CL:0002419,3.66e-10,18;CL:0000790,3.66e-10,18;CL:0000066,1.12e-09,253 | |||
|ontology_enrichment_development_v019=CL:0000790;3.48e-10;18 | |||
|ontology_enrichment_disease=DOID:0050687!9.67e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.18e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.41e-07!14;UBERON:0000158!4.41e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;9.35e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.06e-09,14;UBERON:0000158,1.06e-09,14;UBERON:0001008,5.00e-08,48;UBERON:0003124,7.31e-08,7;UBERON:0006554,1.58e-07,47;UBERON:0000077,8.83e-07,29;UBERON:0000478,9.67e-07,24 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.704772020479856,0,0.446961094427288,0,0,0,0,0.491467873003018,0,10.4851858622483,8.96807725976742,0.618831764800233,1.98838425436749,0,0,0,0,0,0,0,0,0.547497700291537,0.502170558379211,0.152826811495903,0,0.236132343941038,0.786728553697808,0.767658796194425,0.928896739896456,0,0.6024118375565,0.369754010166788,0,0,0.293600439334847,0,0.802177789880567,1.73608696572681,0,1.29557466407592,0,0,0,0.485168122375632,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.641858054152187,0,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,5.90129310341499,3.93010762749165,6.7848494669838,4.34684888015763,2.60737813306872,1.89379122293893,5.84480185223734,28.5210769626044,7.07054177939609,6.64601683750863,4.60366568400527,11.5282187753108,11.705341280389,11.675091226861,16.5810010671509,8.98389565778663,2.96573126324121,2.40786745280742,3.1360657141493,7.59172596073693,3.06576394881537,4.46715679127419,4.80737414837055,5.09704662918555,6.51083453856419,0,4.66782869141096,3.4556385011693,3.74792179657038,5.20909954496837,2.46338399076314,6.45141578319144,5.08136371988664,3.62061009706997,0,1.34140171940727,0.895037932904712,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.589405839739707,4.00724817121796,1.11235332835329,0,0.174129737299267,0.132957960518865,0,0,0,2.98143611050058,0.860234595106124,1.73570250803797,1.69592382577203,1.67799774483962,1.10047216776027,1.25396979922086,0.258416759169329,0.71153252537342,0.66944122552934,2.41697590265488,0,1.46437234528902,2.20597848207521,1.62028389576352,2.23249320710199,2.2452937262617,1.57656072676651,6.13266549863533,7.59412527654503,1.83201743930407,0,0,1.3082821564276,0,0.12663051166458,0.132409180813219,0,0,1.12135520028461,2.1349799145941,0.49333509683432,0,0.808264032418128,0.163461903113459,0,0,0.234321431833797,0,1.1409436430889,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,1.82032272387605,2.87447256726495,0,0,0.277064115484183,0,0,0,0.340296549480063,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,1.06502877754984,0.503760491138201,0,0.386521706326594,0.272746120590835,1.14721838155602,0.121973706129595,0,0.232387885739037,0.725627385107593,0.504641701751257,0,0,0,0,0,0,1.0647612003586,1.85443159085912,0.723033089650446,0.772057809126758,1.08939722046203,0.474541238222193,0.269662616320329,0.784885860501384,1.15424147083917,0,4.20725321410337,0,0,0,0,0,19.4243763742446,9.47010976781974,0.343135620597051,7.35326912237791,7.86812272803337,4.62433273093502,0,0.325808305310325,0,0,0.463721619900307,0,0,0,0.380508304469197,48.2024682755158,36.0564188079846,0,0,0.148631162288728,0,0.16798212819886,0,4.83616022595381,3.48760726216754,6.51750554580859,3.94130590316755,0.352193736052904,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0.821905290201534,0,6.61302349561811,4.13764596424047,5.60631694634745,3.20857590699371,0,0,0,0,0,0,0,0.414415513436035,1.34960640891054,2.00068208423871,0.271265023699736,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0.553107505625109,0,0,0,2.06768026122887,1.72571360654893,0.960548020230999,14.2469958579742,11.6504807657348,17.2362467197918,0,0.153461973288062,0,0,0,0.482561763430822,0,0,0,0,0,0,10.6356315640628,7.21823293091825,5.98526428083326,0,0,0.131124414959424,5.41439535488894,1.77135275340154,0.784349769176855,0,0.422206515571503,3.4120015221269,0.680374821106063,0.647747748306418,7.71136263451447,0.270946437543853,0,1.52925763827023,4.98645605357235,1.34324852833307,0,0,0,0.656029291399411,0.650756789328606,12.6740444326698,0,0,5.16838984196555,12.3511446746939,0,0,0,0,0,0,0,0,0,0.165284915360978,0.576570202095319,0.255225424989168,0.10115778085555,0.464845549297286,0.31481234683064,0,6.77673876387395,3.72614221221915,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,2.22400729730648,4.75530963519025,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0.143411352204052,0,0,0,0,0,0,0,0,0,0,11.4855436947671,7.31859133541091,3.36942951335251,7.98174276366016,3.90529780351831,2.53723804616085,3.0585488285695,2.84823593587081,1.66762242820452,3.70226045777575,1.29694662238543,2.16012574895246,3.96562588147135,0,0,22.2986596542739,0,2.01976898167023,17.0740424036194,7.97131363644112,2.59453182862662,0.191505370132367,0.635020748171649,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0.586164286206121,1.11362469558097,0,1.89318974933188,9.9921590399346,1.4098700508785,7.85990269714523,0.73254089635947,0.121360521749513,7.80103689942349,1.42068073403207,23.6357039890313,9.50286978664444,19.6582849343509,0,0,1.33570446027487,1.31843099381408,0,0.597743964753209,0.276283915531148,0,3.98847861758404,1.35393286007176,0,0,26.4951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| |||
|short_description=p3@GATA3 | |||
}} |
Revision as of 14:32, 10 September 2013
Short description: | p3@GATA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_GATA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000481743_5end |
EntrezGene: | GATA3 |
HGNC: | 4172 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.04e-13 | 25 |
pro-T cell | 4.04e-13 | 25 |
squamous epithelial cell | 4.00e-12 | 63 |
mature alpha-beta T cell | 3.66e-10 | 18 |
alpha-beta T cell | 3.66e-10 | 18 |
immature T cell | 3.66e-10 | 18 |
mature T cell | 3.66e-10 | 18 |
immature alpha-beta T cell | 3.66e-10 | 18 |
epithelial cell | 1.12e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.06e-09 | 14 |
membranous layer | 1.06e-09 | 14 |
renal system | 5.00e-08 | 48 |
chorion | 7.31e-08 | 7 |
urinary system structure | 1.58e-07 | 47 |
mixed endoderm/mesoderm-derived structure | 8.83e-07 | 29 |
extraembryonic structure | 9.67e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.18e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.