FFCP PHASE1:Hg19::chr10:96500094..96500099,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1603|description=CAGE_peak_at_chr10:96500094..96500099,+|id=chr10:96500094..96500099,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000002!7.33e-08!6;UBERON:0001560!7.33e-08!6;UBERON:0009497!5.79e-07!25;UBERON:0000015!5.79e-07!25;UBERON:0002423!5.79e-07!25;UBERON:0006235!5.79e-07!25;UBERON:0004161!5.79e-07!25;UBERON:0002107!9.98e-07!19;UBERON:0006925!9.98e-07!19;UBERON:0008836!9.98e-07!19|ontology_enrichment_uberon_v019=UBERON:0002108;2.34e-32;4!UBERON:0000160;8.47e-10;17!UBERON:0002107;2.26e-09;19!UBERON:0006925;2.26e-09;19!UBERON:0005409;6.98e-08;22!UBERON:0002423;2.35e-07;25!UBERON:0001871;5.08e-07;6!UBERON:0000922;9.46e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.34e-32,4;UBERON:0000160,8.47e-10,17;UBERON:0002107,2.26e-09,19;UBERON:0006925,2.26e-09,19;UBERON:0008836,2.26e-09,19;UBERON:0008835,3.15e-08,22;UBERON:0003894,3.15e-08,22;UBERON:0009854,6.52e-08,23;UBERON:0007499,2.35e-07,25;UBERON:0009497,2.35e-07,25;UBERON:0000015,2.35e-07,25;UBERON:0002423,2.35e-07,25;UBERON:0006235,2.35e-07,25;UBERON:0004161,2.35e-07,25;UBERON:0009856,4.15e-07,26;UBERON:0005409,4.41e-07,25;UBERON:0001871,5.08e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,4.83962864194656,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0.576361668616424,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0.58620893471233,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,1.77500563648273,1.09279780251979,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:96500094..96500099,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1603 | |||
|description=CAGE_peak_at_chr10:96500094..96500099,+ | |||
|id=chr10:96500094..96500099,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000002!7.33e-08!6;UBERON:0001560!7.33e-08!6;UBERON:0009497!5.79e-07!25;UBERON:0000015!5.79e-07!25;UBERON:0002423!5.79e-07!25;UBERON:0006235!5.79e-07!25;UBERON:0004161!5.79e-07!25;UBERON:0002107!9.98e-07!19;UBERON:0006925!9.98e-07!19;UBERON:0008836!9.98e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.34e-32;4!UBERON:0000160;8.47e-10;17!UBERON:0002107;2.26e-09;19!UBERON:0006925;2.26e-09;19!UBERON:0005409;6.98e-08;22!UBERON:0002423;2.35e-07;25!UBERON:0001871;5.08e-07;6!UBERON:0000922;9.46e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.34e-32,4;UBERON:0000160,8.47e-10,17;UBERON:0002107,2.26e-09,19;UBERON:0006925,2.26e-09,19;UBERON:0008836,2.26e-09,19;UBERON:0008835,3.15e-08,22;UBERON:0003894,3.15e-08,22;UBERON:0009854,6.52e-08,23;UBERON:0007499,2.35e-07,25;UBERON:0009497,2.35e-07,25;UBERON:0000015,2.35e-07,25;UBERON:0002423,2.35e-07,25;UBERON:0006235,2.35e-07,25;UBERON:0004161,2.35e-07,25;UBERON:0009856,4.15e-07,26;UBERON:0005409,4.41e-07,25;UBERON:0001871,5.08e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,4.83962864194656,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0.576361668616424,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0.58620893471233,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,1.77500563648273,1.09279780251979,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:96500094..96500099,+ | |||
}} |
Revision as of 15:05, 10 September 2013
Short description: | p@chr10:96500094..96500099, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:96500094..96500099, + |
Coexpression cluster: | C1603_Hepatocyte_colon_duodenum_small_gall_temporal_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 2.34e-32 | 4 |
intestine | 8.47e-10 | 17 |
liver | 2.26e-09 | 19 |
digestive gland | 2.26e-09 | 19 |
liver bud | 2.26e-09 | 19 |
hepatic diverticulum | 3.15e-08 | 22 |
liver primordium | 3.15e-08 | 22 |
digestive tract diverticulum | 6.52e-08 | 23 |
epithelial sac | 2.35e-07 | 25 |
epithelium of foregut-midgut junction | 2.35e-07 | 25 |
anatomical boundary | 2.35e-07 | 25 |
hepatobiliary system | 2.35e-07 | 25 |
foregut-midgut junction | 2.35e-07 | 25 |
septum transversum | 2.35e-07 | 25 |
sac | 4.15e-07 | 26 |
gastrointestinal system | 4.41e-07 | 25 |
temporal lobe | 5.08e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.