FFCP PHASE1:Hg19::chr10:98072001..98072012,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C157|description=CAGE_peak_at_chr10:98072001..98072012,-|id=chr10:98072001..98072012,-|ontology_enrichment_celltype=CL:0002322!1.70e-28!5;CL:0000039!9.68e-22!7;CL:0000586!9.68e-22!7;CL:0000817!2.79e-13!3;CL:0000819!1.73e-10!1;CL:0001024!2.74e-10!1;CL:0000148!1.41e-08!10;CL:0000541!1.41e-08!10|ontology_enrichment_celltype_v019=CL:0000039;1.43e-64;7!CL:0000586;1.43e-64;7!CL:0000817;2.37e-29;1|ontology_enrichment_celltype_v019_2=CL:0000039,1.32e-64,7;CL:0000586,1.32e-64,7;CL:0000817,1.09e-10,3|ontology_enrichment_development_v019=UBERON:0009117;1.87e-45;10!UBERON:0005564;1.87e-45;10!UBERON:0006603;3.26e-08;65|ontology_enrichment_disease=DOID:3095!8.09e-15!22;DOID:2994!8.09e-15!22;DOID:0060073!1.73e-10!1;DOID:8675!1.73e-10!1|ontology_enrichment_disease_v019=DOID:3095;4.73e-21;22!DOID:2994;4.73e-21;22|ontology_enrichment_disease_v019_2=DOID:3095,4.61e-21,22;DOID:2994,4.61e-21,22|ontology_enrichment_uberon=UBERON:0000473!4.67e-19!8;UBERON:0003135!6.35e-14!11;UBERON:0000991!5.32e-11!21;UBERON:0009196!5.32e-11!21;UBERON:0009117!5.32e-11!21;UBERON:0005564!5.32e-11!21;UBERON:0004176!1.71e-10!22;UBERON:0002370!2.18e-10!4;UBERON:0005058!2.18e-10!4;UBERON:0009113!2.18e-10!4;UBERON:0003295!2.18e-10!4;UBERON:0005562!2.18e-10!4;UBERON:0003351!3.34e-07!6;UBERON:0003101!4.94e-07!22;UBERON:0000079!4.94e-07!22|ontology_enrichment_uberon_v019=UBERON:0002370;4.14e-57;2!UBERON:0005058;4.14e-57;2!UBERON:0009113;4.14e-57;2!UBERON:0000473;1.31e-56;8!UBERON:0003135;2.14e-41;11!UBERON:0004177;1.36e-23;5!UBERON:0005057;1.36e-23;5!UBERON:0000991;5.05e-22;21!UBERON:0003101;4.73e-21;22!UBERON:0000079;4.73e-21;22!UBERON:0000922;1.64e-10;49!UBERON:0002323;6.02e-10;45!UBERON:0003133;3.13e-08;44|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-56,8;UBERON:0003135,2.04e-41,11;UBERON:0002370,3.16e-29,4;UBERON:0005058,3.16e-29,4;UBERON:0009113,3.16e-29,4;UBERON:0003295,3.16e-29,4;UBERON:0005562,3.16e-29,4;UBERON:0000991,4.92e-22,21;UBERON:0009196,4.92e-22,21;UBERON:0009117,4.92e-22,21;UBERON:0005564,4.92e-22,21;UBERON:0004176,4.61e-21,22;UBERON:0003101,4.61e-21,22;UBERON:0000079,4.61e-21,22;UBERON:0003351,7.13e-20,6;UBERON:0004177,3.42e-17,7;UBERON:0005057,3.42e-17,7;UBERON:0000974,2.37e-12,10;UBERON:0003408,2.37e-12,10;UBERON:0001042,2.37e-12,10;UBERON:0009145,2.37e-12,10;UBERON:0006562,2.55e-11,11;UBERON:0009722,2.55e-11,11;UBERON:0007690,2.55e-11,11;UBERON:0002323,2.33e-10,46;UBERON:0003133,6.02e-10,48;UBERON:0004458,9.39e-10,49;UBERON:0003886,6.83e-09,54;UBERON:0005156,3.56e-08,59;UBERON:0000990,3.56e-08,59;UBERON:0002553,6.40e-08,61;UBERON:0008814,2.77e-07,18;UBERON:0001557,6.01e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16403819464667,0.924843963529383,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.98339014767326,0,2.44773191380756,1.3360870263278,8.45433075720573,25.3214614685299,0,0,0,0,0,0,8.4611471885168,2.17261500035503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0|short_description=p@chr10:98072001..98072012,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_at_chr10:98072001..98072012,- | |||
|id=chr10:98072001..98072012,- | |||
|ontology_enrichment_celltype=CL:0002322!1.70e-28!5;CL:0000039!9.68e-22!7;CL:0000586!9.68e-22!7;CL:0000817!2.79e-13!3;CL:0000819!1.73e-10!1;CL:0001024!2.74e-10!1;CL:0000148!1.41e-08!10;CL:0000541!1.41e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.43e-64;7!CL:0000586;1.43e-64;7!CL:0000817;2.37e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.32e-64,7;CL:0000586,1.32e-64,7;CL:0000817,1.09e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.87e-45;10!UBERON:0005564;1.87e-45;10!UBERON:0006603;3.26e-08;65 | |||
|ontology_enrichment_disease=DOID:3095!8.09e-15!22;DOID:2994!8.09e-15!22;DOID:0060073!1.73e-10!1;DOID:8675!1.73e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.73e-21;22!DOID:2994;4.73e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.61e-21,22;DOID:2994,4.61e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.67e-19!8;UBERON:0003135!6.35e-14!11;UBERON:0000991!5.32e-11!21;UBERON:0009196!5.32e-11!21;UBERON:0009117!5.32e-11!21;UBERON:0005564!5.32e-11!21;UBERON:0004176!1.71e-10!22;UBERON:0002370!2.18e-10!4;UBERON:0005058!2.18e-10!4;UBERON:0009113!2.18e-10!4;UBERON:0003295!2.18e-10!4;UBERON:0005562!2.18e-10!4;UBERON:0003351!3.34e-07!6;UBERON:0003101!4.94e-07!22;UBERON:0000079!4.94e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.14e-57;2!UBERON:0005058;4.14e-57;2!UBERON:0009113;4.14e-57;2!UBERON:0000473;1.31e-56;8!UBERON:0003135;2.14e-41;11!UBERON:0004177;1.36e-23;5!UBERON:0005057;1.36e-23;5!UBERON:0000991;5.05e-22;21!UBERON:0003101;4.73e-21;22!UBERON:0000079;4.73e-21;22!UBERON:0000922;1.64e-10;49!UBERON:0002323;6.02e-10;45!UBERON:0003133;3.13e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-56,8;UBERON:0003135,2.04e-41,11;UBERON:0002370,3.16e-29,4;UBERON:0005058,3.16e-29,4;UBERON:0009113,3.16e-29,4;UBERON:0003295,3.16e-29,4;UBERON:0005562,3.16e-29,4;UBERON:0000991,4.92e-22,21;UBERON:0009196,4.92e-22,21;UBERON:0009117,4.92e-22,21;UBERON:0005564,4.92e-22,21;UBERON:0004176,4.61e-21,22;UBERON:0003101,4.61e-21,22;UBERON:0000079,4.61e-21,22;UBERON:0003351,7.13e-20,6;UBERON:0004177,3.42e-17,7;UBERON:0005057,3.42e-17,7;UBERON:0000974,2.37e-12,10;UBERON:0003408,2.37e-12,10;UBERON:0001042,2.37e-12,10;UBERON:0009145,2.37e-12,10;UBERON:0006562,2.55e-11,11;UBERON:0009722,2.55e-11,11;UBERON:0007690,2.55e-11,11;UBERON:0002323,2.33e-10,46;UBERON:0003133,6.02e-10,48;UBERON:0004458,9.39e-10,49;UBERON:0003886,6.83e-09,54;UBERON:0005156,3.56e-08,59;UBERON:0000990,3.56e-08,59;UBERON:0002553,6.40e-08,61;UBERON:0008814,2.77e-07,18;UBERON:0001557,6.01e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16403819464667,0.924843963529383,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.98339014767326,0,2.44773191380756,1.3360870263278,8.45433075720573,25.3214614685299,0,0,0,0,0,0,8.4611471885168,2.17261500035503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr10:98072001..98072012,- | |||
}} |
Revision as of 15:10, 10 September 2013
Short description: | p@chr10:98072001..98072012, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:98072001..98072012, - |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.32e-64 | 7 |
germ cell | 1.32e-64 | 7 |
precursor B cell | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-56 | 8 |
male reproductive organ | 2.04e-41 | 11 |
thymus | 3.16e-29 | 4 |
hemolymphoid system gland | 3.16e-29 | 4 |
thymic region | 3.16e-29 | 4 |
pharyngeal gland | 3.16e-29 | 4 |
thymus primordium | 3.16e-29 | 4 |
gonad | 4.92e-22 | 21 |
indifferent external genitalia | 4.92e-22 | 21 |
indifferent gonad | 4.92e-22 | 21 |
gonad primordium | 4.92e-22 | 21 |
external genitalia | 4.61e-21 | 22 |
male organism | 4.61e-21 | 22 |
male reproductive system | 4.61e-21 | 22 |
pharyngeal epithelium | 7.13e-20 | 6 |
hemopoietic organ | 3.42e-17 | 7 |
immune organ | 3.42e-17 | 7 |
neck | 2.37e-12 | 10 |
gland of gut | 2.37e-12 | 10 |
chordate pharynx | 2.37e-12 | 10 |
pharyngeal region of foregut | 2.37e-12 | 10 |
pharynx | 2.55e-11 | 11 |
entire pharyngeal arch endoderm | 2.55e-11 | 11 |
early pharyngeal endoderm | 2.55e-11 | 11 |
body cavity | 2.33e-10 | 46 |
reproductive organ | 6.02e-10 | 48 |
body cavity or lining | 9.39e-10 | 49 |
body cavity precursor | 6.83e-09 | 54 |
reproductive structure | 3.56e-08 | 59 |
reproductive system | 3.56e-08 | 59 |
anatomical cavity | 6.40e-08 | 61 |
pharyngeal arch system | 2.77e-07 | 18 |
upper respiratory tract | 6.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.61e-21 | 22 |
germ cell cancer | 4.61e-21 | 22 |
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