FFCP PHASE1:Hg19::chr10:99473626..99473647,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83742|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28674|TSSclassifier=W|UniProt=|association_with_transcript=145bp_to_ENST00000285605,uc001koj.3_5end|description=CAGE_peak_4_at_MARVELD1_5end|id=chr10:99473626..99473647,+|ontology_enrichment_celltype=CL:0000055!1.29e-19!180;CL:0000222!2.26e-11!119;CL:0002321!2.86e-10!248;CL:0000220!4.42e-10!246;CL:0000144!5.25e-10!625;CL:0002371!1.73e-09!591;CL:0000057!6.36e-09!75;CL:0000183!1.41e-08!59;CL:0000548!2.95e-08!679;CL:0000004!2.95e-08!679;CL:0000255!2.95e-08!679;CL:0000012!5.31e-08!682;CL:0000680!1.12e-07!57;CL:0000056!1.12e-07!57;CL:0000355!1.12e-07!57;CL:0000192!3.14e-07!42;CL:0000514!3.14e-07!42;CL:0000187!4.11e-07!54|ontology_enrichment_celltype_v019=CL:0002334;9.51e-11;12!CL:0000153;1.58e-08;9!CL:0000447;1.58e-08;9!CL:0000151;7.78e-08;36!CL:0000136;3.42e-07;13!CL:0000669;5.89e-07;4!CL:0000138;7.14e-07;6!CL:0002579;9.22e-07;3|ontology_enrichment_celltype_v019_2=CL:0002334,6.17e-11,12;CL:0000136,1.18e-09,15;CL:0000057,5.93e-09,76;CL:0000151,6.80e-09,36;CL:0000153,1.44e-08,9;CL:0000447,1.44e-08,9;CL:0000058,5.71e-07,6;CL:0000138,5.71e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!2.55e-10!84;UBERON:0000914!3.95e-09!83;UBERON:0002329!3.95e-09!83;UBERON:0003077!3.95e-09!83;UBERON:0003059!3.95e-09!83;UBERON:0007282!3.95e-09!83;UBERON:0009618!3.95e-09!83;UBERON:0007285!3.95e-09!83;UBERON:0000486!1.70e-08!82;UBERON:0001981!1.72e-08!60;UBERON:0007500!1.72e-08!60;UBERON:0004537!1.72e-08!60;UBERON:0006965!1.72e-08!60;UBERON:0006914!3.20e-08!25;UBERON:0000468!4.21e-08!659;UBERON:0000490!5.88e-08!138;UBERON:0004290!6.26e-08!70;UBERON:0003102!9.03e-08!95;UBERON:0002049!1.19e-07!79;UBERON:0007798!1.19e-07!79;UBERON:0000926!1.52e-07!448;UBERON:0004120!1.52e-07!448;UBERON:0006603!1.52e-07!448;UBERON:0005256!2.31e-07!143;UBERON:0000055!4.22e-07!69;UBERON:0001134!4.39e-07!61;UBERON:0002036!4.39e-07!61;UBERON:0003082!4.39e-07!61;UBERON:0004923!5.21e-07!57;UBERON:0002385!5.82e-07!63;UBERON:0001015!5.82e-07!63;UBERON:0000383!5.82e-07!63;UBERON:0001637!7.49e-07!42;UBERON:0003509!7.49e-07!42;UBERON:0004572!7.49e-07!42;UBERON:0000487!7.94e-07!22|ontology_enrichment_uberon_v019=UBERON:0004457;2.01e-12;9!UBERON:0000042;2.01e-12;9!UBERON:0003688;3.13e-11;6!UBERON:0002358;3.13e-11;6!UBERON:0003684;3.13e-11;6!UBERON:0001178;3.13e-11;6|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.12e-11,6;UBERON:0002358,6.12e-11,6;UBERON:0003684,6.12e-11,6;UBERON:0001178,6.12e-11,6;UBERON:0004872,4.61e-09,83;UBERON:0004923,5.60e-09,66;UBERON:0004457,1.30e-08,12;UBERON:0000042,1.30e-08,12;UBERON:0003102,1.47e-07,99;UBERON:0007500,1.72e-07,59;UBERON:0001981,1.72e-07,59;UBERON:0004537,1.72e-07,59;UBERON:0006965,1.72e-07,59;UBERON:0001637,3.18e-07,42;UBERON:0003509,3.18e-07,42;UBERON:0004572,3.18e-07,42;UBERON:0004573,5.60e-07,33;UBERON:0004571,5.60e-07,33|phase1_expression=5.81370813665781,2.99740733447376,5.63817616383885,1.0007329835313,5.81049422755474,0.872338524100369,2.53299878168311,1.89515962028049,1.82829939739887,0.245733936501509,1.39560233594486,0.655324116390517,1.58260186937072,0.123766352960047,0.994192127183747,0,0,0,0,0.492484232307152,0.408001382488506,0.313454721478088,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,1.204823675113,0.369754010166788,0,0,0,0,0.200544447470142,0.217010870715852,0.895661896959697,0.647787332037959,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.425208599930087,0,0,0.600707571366025,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,1.44575660953827,2.50668955317945,3.33146993609895,3.9764297352555,1.45990461090791,0.189069634328136,0,0.263504357079378,0.327447688744282,0.728590576585084,0.370784442784429,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0.79504962946682,0.860234595106124,1.38856200643038,1.13061588384802,0.838998872419812,1.10047216776027,0.626984899610432,0,0.35576626268671,0,2.41697590265488,0.760272105718513,1.70843440283719,0,1.62028389576352,1.16089646769304,0.898117490504679,0.337834441449967,1.53316637465883,0.949265659568129,0.732806975721629,0,0,0.872188104285069,0.496971951695318,2.40597972162702,0,2.29469296599051,3.54668382198357,1.12135520028461,0,1.97334038733728,1.24484414159907,0,0.326923806226917,1.51357427644931,0.576175924479999,0.468642863667593,1.5608003841516,1.1409436430889,1.19558944441441,0.587172493218824,0.161872944368132,0,1.02077085627447,0.368502951935304,0.413303124703062,4.75201142912821,3.21447008062124,0,0.718618141816238,0.336672227908132,0.500474079487857,0,0.438977620880838,0.612975591598039,3.30523729594513,0.226864366320042,0,0.640672166455702,0,0.30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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83742 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28674 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=145bp_to_ENST00000285605,uc001koj.3_5end | |||
|description=CAGE_peak_4_at_MARVELD1_5end | |||
|id=chr10:99473626..99473647,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.29e-19!180;CL:0000222!2.26e-11!119;CL:0002321!2.86e-10!248;CL:0000220!4.42e-10!246;CL:0000144!5.25e-10!625;CL:0002371!1.73e-09!591;CL:0000057!6.36e-09!75;CL:0000183!1.41e-08!59;CL:0000548!2.95e-08!679;CL:0000004!2.95e-08!679;CL:0000255!2.95e-08!679;CL:0000012!5.31e-08!682;CL:0000680!1.12e-07!57;CL:0000056!1.12e-07!57;CL:0000355!1.12e-07!57;CL:0000192!3.14e-07!42;CL:0000514!3.14e-07!42;CL:0000187!4.11e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002334;9.51e-11;12!CL:0000153;1.58e-08;9!CL:0000447;1.58e-08;9!CL:0000151;7.78e-08;36!CL:0000136;3.42e-07;13!CL:0000669;5.89e-07;4!CL:0000138;7.14e-07;6!CL:0002579;9.22e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,6.17e-11,12;CL:0000136,1.18e-09,15;CL:0000057,5.93e-09,76;CL:0000151,6.80e-09,36;CL:0000153,1.44e-08,9;CL:0000447,1.44e-08,9;CL:0000058,5.71e-07,6;CL:0000138,5.71e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004457;2.01e-12;9!UBERON:0000042;2.01e-12;9!UBERON:0003688;3.13e-11;6!UBERON:0002358;3.13e-11;6!UBERON:0003684;3.13e-11;6!UBERON:0001178;3.13e-11;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.12e-11,6;UBERON:0002358,6.12e-11,6;UBERON:0003684,6.12e-11,6;UBERON:0001178,6.12e-11,6;UBERON:0004872,4.61e-09,83;UBERON:0004923,5.60e-09,66;UBERON:0004457,1.30e-08,12;UBERON:0000042,1.30e-08,12;UBERON:0003102,1.47e-07,99;UBERON:0007500,1.72e-07,59;UBERON:0001981,1.72e-07,59;UBERON:0004537,1.72e-07,59;UBERON:0006965,1.72e-07,59;UBERON:0001637,3.18e-07,42;UBERON:0003509,3.18e-07,42;UBERON:0004572,3.18e-07,42;UBERON:0004573,5.60e-07,33;UBERON:0004571,5.60e-07,33 | |||
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| |||
|short_description=p4@MARVELD1 | |||
}} |
Revision as of 15:15, 10 September 2013
Short description: | p4@MARVELD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MARVELD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 145bp_to_ENST00000285605, uc001koj.3_5end |
EntrezGene: | MARVELD1 |
HGNC: | 28674 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 6.17e-11 | 12 |
fat cell | 1.18e-09 | 15 |
fibroblast | 5.93e-09 | 76 |
secretory cell | 6.80e-09 | 36 |
GAG secreting cell | 1.44e-08 | 9 |
carbohydrate secreting cell | 1.44e-08 | 9 |
chondroblast | 5.71e-07 | 6 |
chondrocyte | 5.71e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.12e-11 | 6 |
peritoneum | 6.12e-11 | 6 |
abdominal cavity | 6.12e-11 | 6 |
visceral peritoneum | 6.12e-11 | 6 |
splanchnic layer of lateral plate mesoderm | 4.61e-09 | 83 |
organ component layer | 5.60e-09 | 66 |
cavity lining | 1.30e-08 | 12 |
serous membrane | 1.30e-08 | 12 |
surface structure | 1.47e-07 | 99 |
epithelial tube open at both ends | 1.72e-07 | 59 |
blood vessel | 1.72e-07 | 59 |
blood vasculature | 1.72e-07 | 59 |
vascular cord | 1.72e-07 | 59 |
artery | 3.18e-07 | 42 |
arterial blood vessel | 3.18e-07 | 42 |
arterial system | 3.18e-07 | 42 |
systemic artery | 5.60e-07 | 33 |
systemic arterial system | 5.60e-07 | 33 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.