FFCP PHASE1:Hg19::chr11:111228213..111228235,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C442|description=CAGE_peak_at_chr11:111228213..111228235,-|id=chr11:111228213..111228235,-|ontology_enrichment_celltype=CL:0000945!1.49e-59!24;CL:0000826!1.49e-59!24;CL:0000542!1.84e-31!53;CL:0000051!1.84e-31!53;CL:0000838!2.37e-29!52;CL:0000236!3.50e-28!14;CL:0002087!5.43e-15!119;CL:0000738!1.06e-11!140;CL:0000817!1.46e-11!3;CL:0000842!4.72e-10!3;CL:0002031!1.11e-09!124;CL:0000785!2.04e-08!2;CL:0000955!2.04e-08!2;CL:0000818!2.04e-08!2;CL:0000954!2.04e-08!2;CL:0000816!2.04e-08!2;CL:0000037!2.78e-08!172;CL:0000566!2.78e-08!172;CL:0000224!1.21e-07!4;CL:0000988!1.78e-07!182|ontology_enrichment_celltype_v019=CL:0000945;1.12e-98;24!CL:0000236;2.38e-45;13!CL:0000542;1.15e-29;53!CL:0000785;2.53e-11;1!CL:0000819;2.53e-11;1!CL:0000946;3.95e-11;1!CL:0000786;3.95e-11;1!CL:0000817;1.21e-10;1!CL:0002087;6.54e-08;104|ontology_enrichment_celltype_v019_2=CL:0000945,9.31e-99,24;CL:0000826,9.31e-99,24;CL:0000236,2.13e-53,14;CL:0000838,2.31e-44,52;CL:0000542,1.76e-43,53;CL:0000051,1.76e-43,53;CL:0000817,1.22e-29,3;CL:0000785,8.49e-21,2;CL:0000955,8.49e-21,2;CL:0000818,8.49e-21,2;CL:0000954,8.49e-21,2;CL:0000816,8.49e-21,2;CL:0002087,1.53e-18,115;CL:0002031,1.13e-17,120;CL:0000738,2.60e-15,136;CL:0002032,1.50e-12,161;CL:0000837,1.50e-12,161;CL:0000037,6.34e-12,168;CL:0000819,2.53e-11,1;CL:0000946,3.08e-11,1;CL:0000786,3.08e-11,1;CL:0000980,3.08e-11,1;CL:0000988,3.44e-11,177|ontology_enrichment_development_v019=CL:0000051;1.15e-29;53!CL:0000954;1.08e-20;2!UBERON:0004872;1.19e-12;7!UBERON:0001045;3.95e-11;1|ontology_enrichment_disease=DOID:0060058!2.40e-12!10|ontology_enrichment_disease_v019=DOID:0060058;4.31e-24;10!DOID:0060073;2.53e-11;1!DOID:8675;2.53e-11;1!DOID:630;3.95e-11;1!DOID:0050177;3.95e-11;1!DOID:0050427;3.95e-11;1|ontology_enrichment_disease_v019_2=DOID:0060058,3.92e-24,10;DOID:0060073,2.53e-11,1;DOID:8675,2.53e-11,1;DOID:630,3.41e-11,1;DOID:0050177,3.41e-11,1;DOID:0050427,3.41e-11,1|ontology_enrichment_uberon=UBERON:0004177!2.89e-11!7;UBERON:0002106!1.22e-10!3;UBERON:0004854!1.22e-10!3;UBERON:0009034!1.22e-10!3;UBERON:0002095!1.22e-10!3;UBERON:0004782!1.22e-10!3;UBERON:0003281!1.22e-10!3;UBERON:0009664!1.22e-10!3;UBERON:0002296!1.22e-10!3;UBERON:0005602!1.22e-10!3;UBERON:0001179!1.22e-10!3;UBERON:0006293!1.22e-10!3|ontology_enrichment_uberon_v019=UBERON:0002106;1.55e-13;3!UBERON:0001154;3.95e-11;1!UBERON:0001153;3.95e-11;1!UBERON:0009854;3.95e-11;1!UBERON:0004177;1.75e-08;5!UBERON:0005057;1.75e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.93e-13,3;UBERON:0004854,1.93e-13,3;UBERON:0009034,1.93e-13,3;UBERON:0002095,1.93e-13,3;UBERON:0004782,1.93e-13,3;UBERON:0003281,1.93e-13,3;UBERON:0009664,1.93e-13,3;UBERON:0002296,1.93e-13,3;UBERON:0005602,1.93e-13,3;UBERON:0001179,1.93e-13,3;UBERON:0006293,1.93e-13,3;UBERON:0001154,4.58e-11,1;UBERON:0001153,4.58e-11,1;UBERON:0001045,4.58e-11,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51501666440576,2.46301768349837,2.20390187678302,0,0,0,0,0,0,3.02122082263176,1.9903692548239,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0.889509253863555,0,1.60158394814405,1.14950487990897,0.661044872784862,0,2.84606484554724,1.17447437874188,3.44045905312706,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929015875628594,1.298422916788,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,3.03912307084262,0,0,0.984678443688556,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.067401132980677,0,0,7.84555593627364,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677386656526276,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C442 | |||
|description=CAGE_peak_at_chr11:111228213..111228235,- | |||
|id=chr11:111228213..111228235,- | |||
|ontology_enrichment_celltype=CL:0000945!1.49e-59!24;CL:0000826!1.49e-59!24;CL:0000542!1.84e-31!53;CL:0000051!1.84e-31!53;CL:0000838!2.37e-29!52;CL:0000236!3.50e-28!14;CL:0002087!5.43e-15!119;CL:0000738!1.06e-11!140;CL:0000817!1.46e-11!3;CL:0000842!4.72e-10!3;CL:0002031!1.11e-09!124;CL:0000785!2.04e-08!2;CL:0000955!2.04e-08!2;CL:0000818!2.04e-08!2;CL:0000954!2.04e-08!2;CL:0000816!2.04e-08!2;CL:0000037!2.78e-08!172;CL:0000566!2.78e-08!172;CL:0000224!1.21e-07!4;CL:0000988!1.78e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.12e-98;24!CL:0000236;2.38e-45;13!CL:0000542;1.15e-29;53!CL:0000785;2.53e-11;1!CL:0000819;2.53e-11;1!CL:0000946;3.95e-11;1!CL:0000786;3.95e-11;1!CL:0000817;1.21e-10;1!CL:0002087;6.54e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.31e-99,24;CL:0000826,9.31e-99,24;CL:0000236,2.13e-53,14;CL:0000838,2.31e-44,52;CL:0000542,1.76e-43,53;CL:0000051,1.76e-43,53;CL:0000817,1.22e-29,3;CL:0000785,8.49e-21,2;CL:0000955,8.49e-21,2;CL:0000818,8.49e-21,2;CL:0000954,8.49e-21,2;CL:0000816,8.49e-21,2;CL:0002087,1.53e-18,115;CL:0002031,1.13e-17,120;CL:0000738,2.60e-15,136;CL:0002032,1.50e-12,161;CL:0000837,1.50e-12,161;CL:0000037,6.34e-12,168;CL:0000819,2.53e-11,1;CL:0000946,3.08e-11,1;CL:0000786,3.08e-11,1;CL:0000980,3.08e-11,1;CL:0000988,3.44e-11,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.15e-29;53!CL:0000954;1.08e-20;2!UBERON:0004872;1.19e-12;7!UBERON:0001045;3.95e-11;1 | |||
|ontology_enrichment_disease=DOID:0060058!2.40e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.31e-24;10!DOID:0060073;2.53e-11;1!DOID:8675;2.53e-11;1!DOID:630;3.95e-11;1!DOID:0050177;3.95e-11;1!DOID:0050427;3.95e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.92e-24,10;DOID:0060073,2.53e-11,1;DOID:8675,2.53e-11,1;DOID:630,3.41e-11,1;DOID:0050177,3.41e-11,1;DOID:0050427,3.41e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.89e-11!7;UBERON:0002106!1.22e-10!3;UBERON:0004854!1.22e-10!3;UBERON:0009034!1.22e-10!3;UBERON:0002095!1.22e-10!3;UBERON:0004782!1.22e-10!3;UBERON:0003281!1.22e-10!3;UBERON:0009664!1.22e-10!3;UBERON:0002296!1.22e-10!3;UBERON:0005602!1.22e-10!3;UBERON:0001179!1.22e-10!3;UBERON:0006293!1.22e-10!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.55e-13;3!UBERON:0001154;3.95e-11;1!UBERON:0001153;3.95e-11;1!UBERON:0009854;3.95e-11;1!UBERON:0004177;1.75e-08;5!UBERON:0005057;1.75e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.93e-13,3;UBERON:0004854,1.93e-13,3;UBERON:0009034,1.93e-13,3;UBERON:0002095,1.93e-13,3;UBERON:0004782,1.93e-13,3;UBERON:0003281,1.93e-13,3;UBERON:0009664,1.93e-13,3;UBERON:0002296,1.93e-13,3;UBERON:0005602,1.93e-13,3;UBERON:0001179,1.93e-13,3;UBERON:0006293,1.93e-13,3;UBERON:0001154,4.58e-11,1;UBERON:0001153,4.58e-11,1;UBERON:0001045,4.58e-11,1 | |||
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|short_description=p@chr11:111228213..111228235,- | |||
}} |
Revision as of 15:40, 10 September 2013
Short description: | p@chr11:111228213..111228235, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:111228213..111228235, - |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.31e-99 | 24 |
pro-B cell | 9.31e-99 | 24 |
B cell | 2.13e-53 | 14 |
lymphoid lineage restricted progenitor cell | 2.31e-44 | 52 |
lymphocyte | 1.76e-43 | 53 |
common lymphoid progenitor | 1.76e-43 | 53 |
precursor B cell | 1.22e-29 | 3 |
mature B cell | 8.49e-21 | 2 |
pre-B-II cell | 8.49e-21 | 2 |
transitional stage B cell | 8.49e-21 | 2 |
small pre-B-II cell | 8.49e-21 | 2 |
immature B cell | 8.49e-21 | 2 |
nongranular leukocyte | 1.53e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.13e-17 | 120 |
leukocyte | 2.60e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.50e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-12 | 161 |
hematopoietic stem cell | 6.34e-12 | 168 |
B-1 B cell | 2.53e-11 | 1 |
antibody secreting cell | 3.08e-11 | 1 |
plasma cell | 3.08e-11 | 1 |
plasmablast | 3.08e-11 | 1 |
hematopoietic cell | 3.44e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.93e-13 | 3 |
gastrointestinal system mesentery | 1.93e-13 | 3 |
stomach region | 1.93e-13 | 3 |
mesentery | 1.93e-13 | 3 |
gastrointestinal system serosa | 1.93e-13 | 3 |
mesentery of stomach | 1.93e-13 | 3 |
gut mesentery | 1.93e-13 | 3 |
dorsal mesentery | 1.93e-13 | 3 |
dorsal mesogastrium | 1.93e-13 | 3 |
peritoneal cavity | 1.93e-13 | 3 |
spleen primordium | 1.93e-13 | 3 |
vermiform appendix | 4.58e-11 | 1 |
caecum | 4.58e-11 | 1 |
midgut | 4.58e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.92e-24 | 10 |
lymphatic system cancer | 2.53e-11 | 1 |
lymphosarcoma | 2.53e-11 | 1 |
genetic disease | 3.41e-11 | 1 |
monogenic disease | 3.41e-11 | 1 |
xeroderma pigmentosum | 3.41e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.