FFCP PHASE1:Hg19::chr11:113144580..113144623,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100288346|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000526229,NR_034101_5end|coexpression_cluster_id=C11|description=CAGE_peak_1_at_LOC100288346_5end|id=chr11:113144580..113144623,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;2.28e-85;3!UBERON:0003056;1.09e-10;3|ontology_enrichment_disease=DOID:4929!6.94e-09!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001905!1.17e-31!2;UBERON:0002757!1.17e-31!2;UBERON:0010134!1.17e-31!2;UBERON:0002784!1.17e-31!2;UBERON:0005408!1.17e-31!2;UBERON:0001899!1.17e-31!2;UBERON:0002037!4.91e-24!6;UBERON:0006215!4.91e-24!6;UBERON:0004733!5.39e-21!12;UBERON:0002028!5.39e-21!12;UBERON:0007277!5.39e-21!12;UBERON:0004732!2.07e-19!13;UBERON:0003076!7.14e-17!15;UBERON:0003057!7.14e-17!15;UBERON:0004913!1.93e-16!1;UBERON:0003703!1.93e-16!1;UBERON:0001174!1.93e-16!1;UBERON:0004914!1.93e-16!1;UBERON:0003296!2.26e-16!4;UBERON:0010133!2.26e-16!4;UBERON:0002680!2.93e-16!9;UBERON:0001895!2.93e-16!9;UBERON:0010092!2.93e-16!9;UBERON:0002336!3.07e-16!1;UBERON:0001018!3.07e-16!1;UBERON:0002473!3.07e-16!1;UBERON:0005340!3.07e-16!1;UBERON:0002316!3.07e-16!1;UBERON:0003544!3.07e-16!1;UBERON:0001020!3.07e-16!1;UBERON:0005970!3.07e-16!1;UBERON:0002437!3.07e-16!1;UBERON:0000073!6.97e-15!94;UBERON:0001016!6.97e-15!94;UBERON:0003075!1.61e-13!86;UBERON:0007284!1.61e-13!86;UBERON:0005743!2.35e-13!86;UBERON:0002346!6.87e-13!90;UBERON:0001049!1.45e-12!57;UBERON:0005068!1.45e-12!57;UBERON:0006241!1.45e-12!57;UBERON:0007135!1.45e-12!57;UBERON:0002616!3.93e-12!59;UBERON:0001017!4.51e-11!82;UBERON:0000955!3.52e-10!69;UBERON:0006238!3.52e-10!69;UBERON:0007023!5.02e-10!115;UBERON:0001894!9.11e-10!7;UBERON:0006222!9.11e-10!7;UBERON:0002360!6.42e-09!2;UBERON:0000094!6.42e-09!2;UBERON:0007645!6.42e-09!2;UBERON:0005162!8.74e-09!2;UBERON:0000122!8.74e-09!2;UBERON:0004121!5.80e-08!169;UBERON:0000924!9.30e-08!173;UBERON:0006601!9.30e-08!173;UBERON:0000033!3.17e-07!123;UBERON:0000153!7.35e-07!129;UBERON:0007811!7.35e-07!129|ontology_enrichment_uberon_v019=UBERON:0001905;8.47e-57;2!UBERON:0002757;8.47e-57;2!UBERON:0010134;8.47e-57;2!UBERON:0005408;8.47e-57;2!UBERON:0001899;8.47e-57;2!UBERON:0002037;3.16e-43;6!UBERON:0002680;3.84e-29;9!UBERON:0001895;3.84e-29;9!UBERON:0003296;4.86e-29;4!UBERON:0010133;4.86e-29;4!UBERON:0002784;4.86e-29;4!UBERON:0004733;4.42e-22;12!UBERON:0002028;4.42e-22;12!UBERON:0004732;1.90e-20;13!UBERON:0001894;4.36e-17;7!UBERON:0000073;1.94e-08;53!UBERON:0002616;1.94e-08;53!UBERON:0000955;2.92e-08;68!UBERON:0000966;6.39e-07;5!UBERON:0005388;6.39e-07;5!UBERON:0001802;6.39e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.13e-56,2;UBERON:0002757,1.13e-56,2;UBERON:0010134,1.13e-56,2;UBERON:0005408,1.13e-56,2;UBERON:0001899,1.13e-56,2;UBERON:0002037,3.16e-43,6;UBERON:0006215,3.16e-43,6;UBERON:0002680,3.84e-29,9;UBERON:0001895,3.84e-29,9;UBERON:0010092,3.84e-29,9;UBERON:0003296,5.61e-29,4;UBERON:0010133,5.61e-29,4;UBERON:0002784,5.61e-29,4;UBERON:0004733,4.42e-22,12;UBERON:0002028,4.42e-22,12;UBERON:0007277,4.42e-22,12;UBERON:0004732,1.90e-20,13;UBERON:0003076,7.82e-18,15;UBERON:0003057,7.82e-18,15;UBERON:0001894,4.73e-17,7;UBERON:0006222,4.73e-17,7;UBERON:0000073,1.76e-13,53;UBERON:0002616,1.76e-13,53;UBERON:0001049,8.65e-13,56;UBERON:0005068,8.65e-13,56;UBERON:0006241,8.65e-13,56;UBERON:0007135,8.65e-13,56;UBERON:0003075,1.55e-12,82;UBERON:0007284,1.55e-12,82;UBERON:0002346,5.68e-12,86;UBERON:0000955,1.78e-10,68;UBERON:0006238,1.78e-10,68;UBERON:0010371,5.90e-10,104;UBERON:0007023,3.49e-09,114;UBERON:0001017,7.02e-09,81;UBERON:0001016,4.90e-08,89;UBERON:0010314,6.84e-08,132|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.15490417902499,10.3944504335351,5.61540476011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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100288346 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000526229,NR_034101_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_1_at_LOC100288346_5end | |||
|id=chr11:113144580..113144623,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.28e-85;3!UBERON:0003056;1.09e-10;3 | |||
|ontology_enrichment_disease=DOID:4929!6.94e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.17e-31!2;UBERON:0002757!1.17e-31!2;UBERON:0010134!1.17e-31!2;UBERON:0002784!1.17e-31!2;UBERON:0005408!1.17e-31!2;UBERON:0001899!1.17e-31!2;UBERON:0002037!4.91e-24!6;UBERON:0006215!4.91e-24!6;UBERON:0004733!5.39e-21!12;UBERON:0002028!5.39e-21!12;UBERON:0007277!5.39e-21!12;UBERON:0004732!2.07e-19!13;UBERON:0003076!7.14e-17!15;UBERON:0003057!7.14e-17!15;UBERON:0004913!1.93e-16!1;UBERON:0003703!1.93e-16!1;UBERON:0001174!1.93e-16!1;UBERON:0004914!1.93e-16!1;UBERON:0003296!2.26e-16!4;UBERON:0010133!2.26e-16!4;UBERON:0002680!2.93e-16!9;UBERON:0001895!2.93e-16!9;UBERON:0010092!2.93e-16!9;UBERON:0002336!3.07e-16!1;UBERON:0001018!3.07e-16!1;UBERON:0002473!3.07e-16!1;UBERON:0005340!3.07e-16!1;UBERON:0002316!3.07e-16!1;UBERON:0003544!3.07e-16!1;UBERON:0001020!3.07e-16!1;UBERON:0005970!3.07e-16!1;UBERON:0002437!3.07e-16!1;UBERON:0000073!6.97e-15!94;UBERON:0001016!6.97e-15!94;UBERON:0003075!1.61e-13!86;UBERON:0007284!1.61e-13!86;UBERON:0005743!2.35e-13!86;UBERON:0002346!6.87e-13!90;UBERON:0001049!1.45e-12!57;UBERON:0005068!1.45e-12!57;UBERON:0006241!1.45e-12!57;UBERON:0007135!1.45e-12!57;UBERON:0002616!3.93e-12!59;UBERON:0001017!4.51e-11!82;UBERON:0000955!3.52e-10!69;UBERON:0006238!3.52e-10!69;UBERON:0007023!5.02e-10!115;UBERON:0001894!9.11e-10!7;UBERON:0006222!9.11e-10!7;UBERON:0002360!6.42e-09!2;UBERON:0000094!6.42e-09!2;UBERON:0007645!6.42e-09!2;UBERON:0005162!8.74e-09!2;UBERON:0000122!8.74e-09!2;UBERON:0004121!5.80e-08!169;UBERON:0000924!9.30e-08!173;UBERON:0006601!9.30e-08!173;UBERON:0000033!3.17e-07!123;UBERON:0000153!7.35e-07!129;UBERON:0007811!7.35e-07!129 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.13e-56,2;UBERON:0002757,1.13e-56,2;UBERON:0010134,1.13e-56,2;UBERON:0005408,1.13e-56,2;UBERON:0001899,1.13e-56,2;UBERON:0002037,3.16e-43,6;UBERON:0006215,3.16e-43,6;UBERON:0002680,3.84e-29,9;UBERON:0001895,3.84e-29,9;UBERON:0010092,3.84e-29,9;UBERON:0003296,5.61e-29,4;UBERON:0010133,5.61e-29,4;UBERON:0002784,5.61e-29,4;UBERON:0004733,4.42e-22,12;UBERON:0002028,4.42e-22,12;UBERON:0007277,4.42e-22,12;UBERON:0004732,1.90e-20,13;UBERON:0003076,7.82e-18,15;UBERON:0003057,7.82e-18,15;UBERON:0001894,4.73e-17,7;UBERON:0006222,4.73e-17,7;UBERON:0000073,1.76e-13,53;UBERON:0002616,1.76e-13,53;UBERON:0001049,8.65e-13,56;UBERON:0005068,8.65e-13,56;UBERON:0006241,8.65e-13,56;UBERON:0007135,8.65e-13,56;UBERON:0003075,1.55e-12,82;UBERON:0007284,1.55e-12,82;UBERON:0002346,5.68e-12,86;UBERON:0000955,1.78e-10,68;UBERON:0006238,1.78e-10,68;UBERON:0010371,5.90e-10,104;UBERON:0007023,3.49e-09,114;UBERON:0001017,7.02e-09,81;UBERON:0001016,4.90e-08,89;UBERON:0010314,6.84e-08,132 | |||
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|short_description=p1@LOC100288346 | |||
}} |
Revision as of 15:46, 10 September 2013
Short description: | p1@LOC100288346 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC100288346_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000526229, NR_034101_5end |
EntrezGene: | LOC100288346 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.