FFCP PHASE1:Hg19::chr11:2016740..2016751,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_BC106079_5end|coexpression_cluster_id=C227|description=CAGE_peak_7_at_BC106079_5end|id=chr11:2016740..2016751,-|ontology_enrichment_celltype=CL:0000349!3.73e-08!3;CL:0002577!3.73e-08!3;CL:0002541!5.02e-08!3;CL:0002579!7.84e-07!3|ontology_enrichment_celltype_v019=CL:0000349;9.31e-42;19!CL:0002577;2.39e-21;3!CL:0002575;1.68e-14;2!CL:0002536;3.91e-14;2!CL:0002537;2.84e-13;5!CL:0002541;2.53e-10;3!CL:0002581;8.69e-08;1!CL:0000669;1.10e-07;4|ontology_enrichment_celltype_v019_2=CL:0000349,8.97e-42,19;CL:0002577,2.94e-21,3;CL:0002575,1.80e-14,2;CL:0002536,3.09e-14,2;CL:0002537,2.78e-13,5;CL:0002541,2.65e-10,3;CL:0002581,7.10e-08,1;CL:0000669,1.14e-07,4|ontology_enrichment_development_v019=UBERON:0003124;8.69e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1799;3.70e-08;1!DOID:10165;3.70e-08;1!DOID:1798;3.70e-08;1|ontology_enrichment_disease_v019_2=DOID:1799,3.83e-08,1;DOID:10165,3.83e-08,1;DOID:1798,3.83e-08,1|ontology_enrichment_uberon=UBERON:0005631!6.55e-23!14;UBERON:0000158!6.55e-23!14;UBERON:0003124!1.57e-16!7;UBERON:0000478!3.14e-14!24;UBERON:0004923!7.39e-13!57;UBERON:0001737!1.00e-10!9;UBERON:0001987!3.42e-10!4;UBERON:0004340!3.42e-10!4;UBERON:0001557!1.94e-09!19;UBERON:0000305!9.92e-09!7;UBERON:0003688!1.80e-08!6;UBERON:0002358!1.80e-08!6;UBERON:0003684!1.80e-08!6;UBERON:0001178!1.80e-08!6;UBERON:0000476!5.02e-08!3;UBERON:0000920!5.02e-08!3;UBERON:0001723!1.43e-07!3;UBERON:0001033!1.43e-07!3;UBERON:0010056!1.43e-07!3;UBERON:0004871!1.46e-07!8;UBERON:0004457!3.38e-07!12;UBERON:0000042!3.38e-07!12|ontology_enrichment_uberon_v019=UBERON:0000478;1.00e-38;24!UBERON:0005631;6.56e-33;10!UBERON:0000158;6.56e-33;10!UBERON:0001987;2.20e-27;4!UBERON:0000305;2.57e-24;7!UBERON:0003124;2.53e-10;3!UBERON:0000920;2.53e-10;3!UBERON:0001723;1.00e-09;3!UBERON:0001033;1.00e-09;3!UBERON:0002426;1.90e-08;1!UBERON:0003831;1.90e-08;1!UBERON:0003898;1.90e-08;1!UBERON:0004830;1.90e-08;1!UBERON:0003830;1.90e-08;1!UBERON:0005175;1.90e-08;1!UBERON:0001774;1.90e-08;1!UBERON:0001103;1.90e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.74e-57,14;UBERON:0000158,4.74e-57,14;UBERON:0000478,9.06e-39,24;UBERON:0003124,1.04e-34,7;UBERON:0001987,2.36e-27,4;UBERON:0004340,2.36e-27,4;UBERON:0000305,2.12e-24,7;UBERON:0004871,2.46e-21,8;UBERON:0004923,8.22e-15,66;UBERON:0000920,2.65e-10,3;UBERON:0001723,9.38e-10,3;UBERON:0001033,9.38e-10,3;UBERON:0010056,9.38e-10,3;UBERON:0002426,1.91e-08,1;UBERON:0003831,1.91e-08,1;UBERON:0003898,1.91e-08,1;UBERON:0004830,1.91e-08,1;UBERON:0003830,1.91e-08,1;UBERON:0005175,1.91e-08,1;UBERON:0001774,1.91e-08,1;UBERON:0001103,1.91e-08,1;UBERON:0010084,1.91e-08,1|phase1_expression=0.908391896352783,0.214100523890983,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0,0,0,2.18441372130172,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.220587945464788,0.653638332277218,0,0.808987848960987,0,1.15424147083917,0.738155454624648,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.88359444852299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0,2.15381273209015,3.43143423810856,0,0,0,7.27506171471023,8.32177197552485,2.11673205330776,0.496215615637554,0,0.841980283299221,0.512556597022804,0.511707249066704,0.160853921143607,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0.580024309752732,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0,1.24644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.68484557265532,10.690728509975,8.6004996587785,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,2.78248697670294,0.54323685961004,4.14701507651495,0.915975934018623,26.1187040249131,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,9.63093176758547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0.19555138273480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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_BC106079_5end | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_7_at_BC106079_5end | |||
|id=chr11:2016740..2016751,- | |||
|ontology_enrichment_celltype=CL:0000349!3.73e-08!3;CL:0002577!3.73e-08!3;CL:0002541!5.02e-08!3;CL:0002579!7.84e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;9.31e-42;19!CL:0002577;2.39e-21;3!CL:0002575;1.68e-14;2!CL:0002536;3.91e-14;2!CL:0002537;2.84e-13;5!CL:0002541;2.53e-10;3!CL:0002581;8.69e-08;1!CL:0000669;1.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.97e-42,19;CL:0002577,2.94e-21,3;CL:0002575,1.80e-14,2;CL:0002536,3.09e-14,2;CL:0002537,2.78e-13,5;CL:0002541,2.65e-10,3;CL:0002581,7.10e-08,1;CL:0000669,1.14e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.69e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;3.70e-08;1!DOID:10165;3.70e-08;1!DOID:1798;3.70e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.83e-08,1;DOID:10165,3.83e-08,1;DOID:1798,3.83e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!6.55e-23!14;UBERON:0000158!6.55e-23!14;UBERON:0003124!1.57e-16!7;UBERON:0000478!3.14e-14!24;UBERON:0004923!7.39e-13!57;UBERON:0001737!1.00e-10!9;UBERON:0001987!3.42e-10!4;UBERON:0004340!3.42e-10!4;UBERON:0001557!1.94e-09!19;UBERON:0000305!9.92e-09!7;UBERON:0003688!1.80e-08!6;UBERON:0002358!1.80e-08!6;UBERON:0003684!1.80e-08!6;UBERON:0001178!1.80e-08!6;UBERON:0000476!5.02e-08!3;UBERON:0000920!5.02e-08!3;UBERON:0001723!1.43e-07!3;UBERON:0001033!1.43e-07!3;UBERON:0010056!1.43e-07!3;UBERON:0004871!1.46e-07!8;UBERON:0004457!3.38e-07!12;UBERON:0000042!3.38e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.00e-38;24!UBERON:0005631;6.56e-33;10!UBERON:0000158;6.56e-33;10!UBERON:0001987;2.20e-27;4!UBERON:0000305;2.57e-24;7!UBERON:0003124;2.53e-10;3!UBERON:0000920;2.53e-10;3!UBERON:0001723;1.00e-09;3!UBERON:0001033;1.00e-09;3!UBERON:0002426;1.90e-08;1!UBERON:0003831;1.90e-08;1!UBERON:0003898;1.90e-08;1!UBERON:0004830;1.90e-08;1!UBERON:0003830;1.90e-08;1!UBERON:0005175;1.90e-08;1!UBERON:0001774;1.90e-08;1!UBERON:0001103;1.90e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.74e-57,14;UBERON:0000158,4.74e-57,14;UBERON:0000478,9.06e-39,24;UBERON:0003124,1.04e-34,7;UBERON:0001987,2.36e-27,4;UBERON:0004340,2.36e-27,4;UBERON:0000305,2.12e-24,7;UBERON:0004871,2.46e-21,8;UBERON:0004923,8.22e-15,66;UBERON:0000920,2.65e-10,3;UBERON:0001723,9.38e-10,3;UBERON:0001033,9.38e-10,3;UBERON:0010056,9.38e-10,3;UBERON:0002426,1.91e-08,1;UBERON:0003831,1.91e-08,1;UBERON:0003898,1.91e-08,1;UBERON:0004830,1.91e-08,1;UBERON:0003830,1.91e-08,1;UBERON:0005175,1.91e-08,1;UBERON:0001774,1.91e-08,1;UBERON:0001103,1.91e-08,1;UBERON:0010084,1.91e-08,1 | |||
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|short_description=p7@BC106079 | |||
}} |
Revision as of 17:08, 10 September 2013
Short description: | p7@BC106079 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_BC106079_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 0bp_to_BC106079_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.97e-42 | 19 |
placental epithelial cell | 2.94e-21 | 3 |
central nervous system pericyte | 1.80e-14 | 2 |
amniotic epithelial cell | 3.09e-14 | 2 |
amnion mesenchymal stem cell | 2.78e-13 | 5 |
chorionic membrane mesenchymal stem cell | 2.65e-10 | 3 |
perirenal preadipocyte | 7.10e-08 | 1 |
pericyte cell | 1.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.74e-57 | 14 |
membranous layer | 4.74e-57 | 14 |
extraembryonic structure | 9.06e-39 | 24 |
chorion | 1.04e-34 | 7 |
placenta | 2.36e-27 | 4 |
allantois | 2.36e-27 | 4 |
amnion | 2.12e-24 | 7 |
somatic layer of lateral plate mesoderm | 2.46e-21 | 8 |
organ component layer | 8.22e-15 | 66 |
egg chorion | 2.65e-10 | 3 |
tongue | 9.38e-10 | 3 |
gustatory system | 9.38e-10 | 3 |
future tongue | 9.38e-10 | 3 |
chest muscle | 1.91e-08 | 1 |
respiratory system muscle | 1.91e-08 | 1 |
skeletal muscle of trunk | 1.91e-08 | 1 |
respiratory system skeletal muscle | 1.91e-08 | 1 |
thoracic segment muscle | 1.91e-08 | 1 |
chest organ | 1.91e-08 | 1 |
muscle of trunk | 1.91e-08 | 1 |
diaphragm | 1.91e-08 | 1 |
future diaphragm | 1.91e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.83e-08 | 1 |
endocrine pancreas cancer | 3.83e-08 | 1 |
pancreatic endocrine carcinoma | 3.83e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.