FFCP PHASE1:Hg19::chr11:2159834..2159900,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3481|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5466|TSSclassifier=N|UniProt=P01344|association_with_transcript=303bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end|coexpression_cluster_id=C172|description=CAGE_peak_9_at_IGF2_5end|id=chr11:2159834..2159900,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;1.03e-09;19|ontology_enrichment_celltype_v019_2=CL:0000349,1.03e-09,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.18e-16!115;UBERON:0000481!7.00e-15!347;UBERON:0000468!1.58e-13!659;UBERON:0000475!1.04e-11!365;UBERON:0004119!7.78e-11!169;UBERON:0000925!7.78e-11!169;UBERON:0006595!7.78e-11!169;UBERON:0005631!1.67e-10!14;UBERON:0000158!1.67e-10!14;UBERON:0000922!1.84e-10!612;UBERON:0000062!1.36e-09!511;UBERON:0002050!2.74e-09!605;UBERON:0005423!2.74e-09!605;UBERON:0000064!2.95e-09!219;UBERON:0000119!3.69e-09!312;UBERON:0002100!5.03e-09!216;UBERON:0000467!5.34e-09!625;UBERON:0000923!5.94e-09!604;UBERON:0005291!5.94e-09!604;UBERON:0006598!5.94e-09!604;UBERON:0002532!5.94e-09!604;UBERON:0000480!7.83e-09!626;UBERON:0000483!8.80e-09!309;UBERON:0000477!4.71e-08!286;UBERON:0001007!1.18e-07!155;UBERON:0001555!1.18e-07!155;UBERON:0007026!1.18e-07!155;UBERON:0003104!1.30e-07!238;UBERON:0009142!1.30e-07!238;UBERON:0000478!1.55e-07!24;UBERON:0001008!2.64e-07!45;UBERON:0005177!2.69e-07!107;UBERON:0005256!5.53e-07!143;UBERON:0006554!6.62e-07!44|ontology_enrichment_uberon_v019=UBERON:0005631;3.35e-09;10!UBERON:0000158;3.35e-09;10!UBERON:0000478;7.72e-09;24!UBERON:0000160;1.25e-07;17!UBERON:0000077;2.25e-07;27!UBERON:0005409;5.34e-07;22!UBERON:0000305;7.69e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.79e-14,160;UBERON:0000925,9.79e-14,160;UBERON:0006595,9.79e-14,160;UBERON:0005631,4.26e-12,14;UBERON:0000158,4.26e-12,14;UBERON:0007023,6.46e-11,114;UBERON:0001007,2.63e-09,145;UBERON:0001555,2.63e-09,145;UBERON:0007026,2.63e-09,145;UBERON:0000478,7.75e-09,24;UBERON:0011216,1.06e-08,223;UBERON:0001008,1.14e-08,48;UBERON:0004921,1.78e-08,118;UBERON:0003104,2.23e-08,160;UBERON:0009142,2.23e-08,160;UBERON:0006554,3.34e-08,47;UBERON:0000160,1.20e-07,17;UBERON:0005409,2.87e-07,25;UBERON:0004923,6.69e-07,66;UBERON:0002100,6.87e-07,199;UBERON:0003124,7.40e-07,7;UBERON:0000305,7.72e-07,7|phase1_expression=6.7221000330106,5.35251309727458,3.80576891059122,13.009528785907,8.93922188854576,20.9361245784089,0,0,0.783556884599516,4.42321085702716,6.97801167972428,74.4885078963887,87.3068697936181,5.19818682432196,15.90707403494,0,0,0,0,5.66356867153224,13.668046313365,17.2400096812948,0,0,0.753255837568817,0,0,0,0,0,7.7408061658038,0,1.204823675113,1.47901604066715,0,0,0,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8971910474006,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,7.31420598941885,0,0.12786256184353,0,3.00802746381534,5.64901423947212,0,0,1.22895262313288,0.665188192387692,1.22968699970376,7.46580730336962,0,0,0,0,0,0,0,0,0.596287222100115,1.72046919021225,0.347140501607594,0.56530794192401,0.838998872419812,3.02629846134074,0,0.775250277507987,0.71153252537342,6.35969164252873,0,0,0.24406205754817,0,6.48113558305408,0.357198913136319,0.22452937262617,0.450445921933289,0,2.84779697870439,1.83201743930407,0,0,2.61656431285521,0,0,0,0.286836620748814,1.06400514659507,3.36406560085384,0,0.98667019366864,1.8672662123986,1.21239604862719,0,20.8873250150005,67.4125831641599,2.34321431833797,0,0,0,0.117434498643765,0.485618833104395,0.280901613404497,0.204154171254893,2.7023549808589,1.03325781175765,34.4520828611796,53.9041905827254,0.910161361938026,0,3.19838616512726,4.37914819551875,0.554128230968366,18.876037697876,2.14541457059314,13.8219014194069,0.340296549480063,0.538168907066586,3.63047560991565,0.211931901159562,0,0,0,0.18611685633159,0,0,0,1.01254888506529,4.52608959092673,0,0.10075209822764,1.3564847384839,0,0.545492241181669,0.286804595389004,0,0.132529768321485,8.24976994373581,6.11600224590686,3.02785021050754,0,0,0,0,51.5448400115497,7.21879481669586,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,2.4694440679884,26.4615680493976,0,0.982827216677626,7.08947888017685,0,108.598791233569,0.686271241194102,0.219500570817251,0,0,4.72201070308501,4.88712457965487,0,2.88662684050547,0.34779121492523,1.6437217193015,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,1.51183915378974,0.141775097242386,0.0895585227028483,0,0,0.492663237895943,0,0.621984346622316,0.144119953416961,0.25248486685276,0.063497894292169,0,0,5.13217338068116,0.102827492703324,0,0,1.56983518083505,26.1576041299968,0.51336800074665,0.646358578788889,3.57656445851882,0,21.5409874433745,27.0419335969552,5.40135485950498,9.92943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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |||
|TSSclassifier=N | |||
|UniProt=P01344 | |||
|association_with_transcript=303bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_9_at_IGF2_5end | |||
|id=chr11:2159834..2159900,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.03e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.03e-09,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.18e-16!115;UBERON:0000481!7.00e-15!347;UBERON:0000468!1.58e-13!659;UBERON:0000475!1.04e-11!365;UBERON:0004119!7.78e-11!169;UBERON:0000925!7.78e-11!169;UBERON:0006595!7.78e-11!169;UBERON:0005631!1.67e-10!14;UBERON:0000158!1.67e-10!14;UBERON:0000922!1.84e-10!612;UBERON:0000062!1.36e-09!511;UBERON:0002050!2.74e-09!605;UBERON:0005423!2.74e-09!605;UBERON:0000064!2.95e-09!219;UBERON:0000119!3.69e-09!312;UBERON:0002100!5.03e-09!216;UBERON:0000467!5.34e-09!625;UBERON:0000923!5.94e-09!604;UBERON:0005291!5.94e-09!604;UBERON:0006598!5.94e-09!604;UBERON:0002532!5.94e-09!604;UBERON:0000480!7.83e-09!626;UBERON:0000483!8.80e-09!309;UBERON:0000477!4.71e-08!286;UBERON:0001007!1.18e-07!155;UBERON:0001555!1.18e-07!155;UBERON:0007026!1.18e-07!155;UBERON:0003104!1.30e-07!238;UBERON:0009142!1.30e-07!238;UBERON:0000478!1.55e-07!24;UBERON:0001008!2.64e-07!45;UBERON:0005177!2.69e-07!107;UBERON:0005256!5.53e-07!143;UBERON:0006554!6.62e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.35e-09;10!UBERON:0000158;3.35e-09;10!UBERON:0000478;7.72e-09;24!UBERON:0000160;1.25e-07;17!UBERON:0000077;2.25e-07;27!UBERON:0005409;5.34e-07;22!UBERON:0000305;7.69e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.79e-14,160;UBERON:0000925,9.79e-14,160;UBERON:0006595,9.79e-14,160;UBERON:0005631,4.26e-12,14;UBERON:0000158,4.26e-12,14;UBERON:0007023,6.46e-11,114;UBERON:0001007,2.63e-09,145;UBERON:0001555,2.63e-09,145;UBERON:0007026,2.63e-09,145;UBERON:0000478,7.75e-09,24;UBERON:0011216,1.06e-08,223;UBERON:0001008,1.14e-08,48;UBERON:0004921,1.78e-08,118;UBERON:0003104,2.23e-08,160;UBERON:0009142,2.23e-08,160;UBERON:0006554,3.34e-08,47;UBERON:0000160,1.20e-07,17;UBERON:0005409,2.87e-07,25;UBERON:0004923,6.69e-07,66;UBERON:0002100,6.87e-07,199;UBERON:0003124,7.40e-07,7;UBERON:0000305,7.72e-07,7 | |||
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| |||
|short_description=p9@IGF2 | |||
}} |
Revision as of 17:12, 10 September 2013
Short description: | p9@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 303bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.03e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.79e-14 | 160 |
endoderm | 9.79e-14 | 160 |
presumptive endoderm | 9.79e-14 | 160 |
extraembryonic membrane | 4.26e-12 | 14 |
membranous layer | 4.26e-12 | 14 |
adult organism | 6.46e-11 | 114 |
digestive system | 2.63e-09 | 145 |
digestive tract | 2.63e-09 | 145 |
primitive gut | 2.63e-09 | 145 |
extraembryonic structure | 7.75e-09 | 24 |
organ system subdivision | 1.06e-08 | 223 |
renal system | 1.14e-08 | 48 |
subdivision of digestive tract | 1.78e-08 | 118 |
mesenchyme | 2.23e-08 | 160 |
entire embryonic mesenchyme | 2.23e-08 | 160 |
urinary system structure | 3.34e-08 | 47 |
intestine | 1.20e-07 | 17 |
gastrointestinal system | 2.87e-07 | 25 |
organ component layer | 6.69e-07 | 66 |
trunk | 6.87e-07 | 199 |
chorion | 7.40e-07 | 7 |
amnion | 7.72e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.