FFCP PHASE1:Hg19::chr11:27255808..27255852,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:27255808..27255852,-|id=chr11:27255808..27255852,-|ontology_enrichment_celltype=CL:0000055!9.71e-10!180;CL:0000569!2.56e-08!4;CL:0000011!2.56e-08!4|ontology_enrichment_celltype_v019=CL:0000319;2.97e-19;1!CL:0000054;2.60e-10;2!CL:0000159;2.60e-10;2!CL:0000137;2.60e-10;2!CL:0000092;2.60e-10;2!CL:0002570;6.06e-10;8!CL:0000062;4.08e-09;9!CL:0000214;2.71e-07;3|ontology_enrichment_celltype_v019_2=CL:0000319,3.25e-19,1;CL:0000062,1.76e-15,11;CL:0000375,1.76e-15,11;CL:0000335,1.76e-15,11;CL:0000159,2.72e-10,2;CL:0000054,3.27e-10,2;CL:0000137,3.27e-10,2;CL:0000092,3.27e-10,2;CL:0002570,5.54e-10,8;CL:0000214,2.19e-07,3|ontology_enrichment_development_v019=CL:0000335;1.56e-15;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3030;2.97e-19;1!DOID:200;2.60e-10;2!DOID:4305;2.60e-10;2|ontology_enrichment_disease_v019_2=DOID:3030,3.25e-19,1;DOID:200,3.27e-10,2;DOID:4305,3.27e-10,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001474;9.67e-10;18!UBERON:0001434;1.99e-08;36!UBERON:0006915;2.71e-07;3!UBERON:0007616;2.71e-07;3!UBERON:0002217;2.71e-07;3!UBERON:0002018;2.71e-07;3!UBERON:0004765;6.49e-07;26|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.19e-07,3;UBERON:0007616,2.19e-07,3;UBERON:0002217,2.19e-07,3;UBERON:0002018,2.19e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0,0.229240217243854,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0.635795703478686,0,0.206105058476878,0,0,1.0126579934476,0.68205903612839,0,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7470839445503,2.97034199714117,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.801288320820636,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,1.65409603063837,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,1.97576935775941,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0.577901179803038,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49254802886874,1.63599316893057,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.151230923763239,0.777186002913902,0.147855149989634,0,0,0,0.414706207840855,0,0,0.450772826991655,0,0,0,0.214821114084977,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0.163565394255844,0.327609848846413,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,4.63921658018096,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0.354996002191696,0.255640214277473,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.385870790539723,0.874238242015829,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:27255808..27255852,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:27255808..27255852,- | |||
|id=chr11:27255808..27255852,- | |||
|ontology_enrichment_celltype=CL:0000055!9.71e-10!180;CL:0000569!2.56e-08!4;CL:0000011!2.56e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000319;2.97e-19;1!CL:0000054;2.60e-10;2!CL:0000159;2.60e-10;2!CL:0000137;2.60e-10;2!CL:0000092;2.60e-10;2!CL:0002570;6.06e-10;8!CL:0000062;4.08e-09;9!CL:0000214;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.25e-19,1;CL:0000062,1.76e-15,11;CL:0000375,1.76e-15,11;CL:0000335,1.76e-15,11;CL:0000159,2.72e-10,2;CL:0000054,3.27e-10,2;CL:0000137,3.27e-10,2;CL:0000092,3.27e-10,2;CL:0002570,5.54e-10,8;CL:0000214,2.19e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000335;1.56e-15;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;2.97e-19;1!DOID:200;2.60e-10;2!DOID:4305;2.60e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.25e-19,1;DOID:200,3.27e-10,2;DOID:4305,3.27e-10,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;9.67e-10;18!UBERON:0001434;1.99e-08;36!UBERON:0006915;2.71e-07;3!UBERON:0007616;2.71e-07;3!UBERON:0002217;2.71e-07;3!UBERON:0002018;2.71e-07;3!UBERON:0004765;6.49e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.19e-07,3;UBERON:0007616,2.19e-07,3;UBERON:0002217,2.19e-07,3;UBERON:0002018,2.19e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0,0.229240217243854,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0.635795703478686,0,0.206105058476878,0,0,1.0126579934476,0.68205903612839,0,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7470839445503,2.97034199714117,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.801288320820636,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,1.65409603063837,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,1.97576935775941,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0.577901179803038,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49254802886874,1.63599316893057,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.151230923763239,0.777186002913902,0.147855149989634,0,0,0,0.414706207840855,0,0,0.450772826991655,0,0,0,0.214821114084977,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0.163565394255844,0.327609848846413,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,4.63921658018096,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0.354996002191696,0.255640214277473,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.385870790539723,0.874238242015829,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:27255808..27255852,- | |||
}} |
Revision as of 17:20, 10 September 2013
Short description: | p@chr11:27255808..27255852, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:27255808..27255852, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.25e-19 | 1 |
osteoblast | 1.76e-15 | 11 |
osteoprogenitor cell | 1.76e-15 | 11 |
mesenchyme condensation cell | 1.76e-15 | 11 |
seromucus secreting cell | 2.72e-10 | 2 |
bone matrix secreting cell | 3.27e-10 | 2 |
osteocyte | 3.27e-10 | 2 |
osteoclast | 3.27e-10 | 2 |
mesenchymal stem cell of adipose | 5.54e-10 | 8 |
synovial cell | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.19e-07 | 3 |
layer of synovial tissue | 2.19e-07 | 3 |
synovial joint | 2.19e-07 | 3 |
synovial membrane of synovial joint | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.25e-19 | 1 |
giant cell tumor | 3.27e-10 | 2 |
bone giant cell tumor | 3.27e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.