FFCP PHASE1:Hg19::chr11:47291193..47291267,+: Difference between revisions
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{{FFCP | 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93928624098468,10.7757172406239,12.3959706331502,6.98590889320229,6.45878921664716,3.22414914091781,3.97520666736664,12.9282956361551,13.4877253777544,4.79043146076122,4.9337051562167,6.30045734149399,11.0043013569766,8.69902016229111,5.95399226174341,3.75462100606094,4.50632614009315,3.19170628885091,2.72008901684737,2.0055191521816,2.14441903734423,2.29510841496863,7.53859662001125,15.9492272394057,17.4497558809807,13.520620516302,8.027728739661,10.8710470506115,15.71038994417,3.18201860353331,6.99890284587797,4.85277176133273,5.42384133735438,7.76377205003967,11.2400377393652,9.99955097414693,2.53733164907686,2.80455971816669,3.88364103051829,1.89403005275089,4.52822223154635,2.66943366478961,2.51724075236616,4.38569678913393,3.41961841282117,3.54852359975121,2.70804504178294,3.59842489730884,3.26052209440145,1.65882483136342,2.12673371646396,7.30443086536427,3.90669783392768,3.42724690951916,1.22061219961398,4.72806513926655,3.86678005352958,2.78420255927096,7.16572599657509,4.00027764663154,1.71697852591396,5.05124233148879,6.30924491143255,3.08191728651685,4.28883182749851,3.91491437947817,4.76082443575772,2.31522474323834,4.16052397660995,5.01448755028165,0.926404341482917,2.63140859494449,4.77060694053879,3.08662461233464,6.25087030416369,2.81865670446741,1.72715170865599,2.73473960559644,16.3144954659042,6.23552988286043,7.17470137692161,6.05191958746624,5.2417575815426,0.737318726261158,7.18461219419332,3.79976052124367,5.86804513317775,3.96094453219876,5.10764358210152,3.68211900503681,5.59518030877778,2.48830904013189,5.75524670866433,9.38075859151132,2.83078695340614,6.55257829152083,4.41304577880466,11.2664707653892,8.42763196961215,7.82102885162541,2.86203915588077,4.17967248506643,3.20228299314188,3.87943538059752,2.7562092961788,25.4990023632944,31.1732467916287,15.6441181876008,17.0246582319827,13.6118715959728,32.5039086581824,17.1164184369762,14.2769420259154,3.33702242903487,9.67351731451471,9.35485852460563,2.77261598760812,8.00902400481051,3.4517996303005,3.97832444232549,6.01682626794058,9.48013822906544,5.47059807863165,2.61906694481422,5.076929442813,7.54066039706931,24.3810680472405,17.1837181695046,15.0881361445864,24.9224134062054,16.4092442705466,3.83780436800028,8.9318012110073,8.96943346234065,4.34392253974624,23.0351789427663,17.15046983316,9.10448406354947,14.1150558637805,8.33802279528805,4.26365753956383,3.42976018874837,19.1674646994665,26.0460183308882,2.71845834033127,4.44925607568277,5.49451649953598,18.0682928403402,3.36326595976547,6.39211104356647,3.45484145949794,3.8220135030964,14.5812150120379,5.21444918717998,7.43945122356002,5.38960644137996,4.81026818838152,4.35153944742377,7.5116129921338,6.91259661814092,9.89522925286638,4.61494802849205,4.94237747603115,13.9717726563007,3.43660302816075,7.44495325594368,8.5998504507969,2.9082412267426,6.57606565222128,3.53561982448581,4.53200186031526,5.33846595652485,5.799072156691,4.37139893753226,8.88969961156001,10.5443910835525,7.37304562820925,4.63078936359736,3.95785860283545,12.6808788596006,5.86523601620379,5.90110813360685,6.1141248526998,4.4126697915703,8.01300260145528,9.81542335574726,9.20843841013967,16.906229103336,5.09781344063451,5.82700291475092,12.956035482689,7.79541016214446,6.60649572840933,3.52894871715692,3.69110286770174,7.30336388246517,11.009502801709,10.0337708206016,5.20646155237509,31.9560003897299,13.9632220908921,8.99345628876181,2.60396512716726,2.31087814315709,3.02838593486652,4.16349201955761,3.16870158694717,4.94124153944604,2.95767606251747,1.60330443159336,4.31906027813771,7.77193371806363,12.655042602446,16.3458119395269,16.5833887891756,13.4462894620464,7.24995538463335,6.90386851244847,15.5013383606415,16.2635751455148,5.49446126645006,6.42836298609466,7.47833599145411,8.92638666377542,5.13349951627922,10.776328482334,8.10460920937243,4.32458463509817,6.59366475748894,4.69600321861948,9.653614114347,2.69475606319761,0,7.94569387188632,7.73102738799903,4.66029741929859,10.0636896795513,5.12909587685173|short_description=p2@MADD}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8567 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6766 | |||
|TSSclassifier=S | |||
|UniProt=Q8WXG6,F8W9P9,B5MEE5,C9J6B0,C9K0L0,A8K8S7 | |||
|association_with_transcript=0bp_to_ENST00000311027,ENST00000349238,ENST00000395342,ENST00000395344,ENST00000402799,ENST00000406482,ENST00000407859,ENST00000428807,ENST00000444117,ENST00000534808,NM_001135944,NM_003682,NM_130471,NM_130472,NM_130473,NM_130474,uc001ner.1,uc001nes.1,uc001net.1,uc001neu.1,uc001nev.1,uc009yln.1_5end | |||
|description=CAGE_peak_2_at_MADD_5end | |||
|id=chr11:47291193..47291267,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.05e-10!182;CL:0000037!6.62e-10!172;CL:0000566!6.62e-10!172;CL:0000738!2.67e-09!140;CL:0002032!4.47e-09!165;CL:0000837!4.47e-09!165;CL:0000791!3.76e-08!18;CL:0000789!3.76e-08!18;CL:0002420!3.76e-08!18;CL:0002419!3.76e-08!18;CL:0000790!3.76e-08!18;CL:0000084!8.82e-07!25;CL:0000827!8.82e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.80e-08;18!CL:0000789;3.80e-08;18!CL:0002419;3.80e-08;18 | |||
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| |||
|short_description=p2@MADD | |||
}} |
Revision as of 17:57, 10 September 2013
Short description: | p2@MADD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MADD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000311027, ENST00000349238, ENST00000395342, ENST00000395344, ENST00000402799, ENST00000406482, ENST00000407859, ENST00000428807, ENST00000444117, ENST00000534808, NM_001135944, NM_003682, NM_130471, NM_130472, NM_130473, NM_130474, uc001ner.1, uc001nes.1, uc001net.1, uc001neu.1, uc001nev.1, uc009yln.1_5end |
EntrezGene: | MADD |
HGNC: | 6766 |
UniProt: | Q8WXG6F8W9P9B5MEE5C9J6B0C9K0L0A8K8S7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.81e-10 | 177 |
hematopoietic stem cell | 1.73e-09 | 168 |
leukocyte | 6.88e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.13e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-08 | 161 |
mature alpha-beta T cell | 3.76e-08 | 18 |
alpha-beta T cell | 3.76e-08 | 18 |
immature T cell | 3.76e-08 | 18 |
mature T cell | 3.76e-08 | 18 |
immature alpha-beta T cell | 3.76e-08 | 18 |
T cell | 8.82e-07 | 25 |
pro-T cell | 8.82e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.33e-25 | 114 |
neural tube | 7.05e-25 | 56 |
neural rod | 7.05e-25 | 56 |
future spinal cord | 7.05e-25 | 56 |
neural keel | 7.05e-25 | 56 |
regional part of nervous system | 9.32e-24 | 53 |
regional part of brain | 9.32e-24 | 53 |
central nervous system | 6.91e-22 | 81 |
brain | 1.01e-21 | 68 |
future brain | 1.01e-21 | 68 |
nervous system | 1.21e-20 | 89 |
regional part of forebrain | 3.58e-19 | 41 |
forebrain | 3.58e-19 | 41 |
anterior neural tube | 3.58e-19 | 41 |
future forebrain | 3.58e-19 | 41 |
neurectoderm | 1.45e-18 | 86 |
neural plate | 4.55e-18 | 82 |
presumptive neural plate | 4.55e-18 | 82 |
telencephalon | 1.10e-15 | 34 |
brain grey matter | 2.49e-15 | 34 |
gray matter | 2.49e-15 | 34 |
pre-chordal neural plate | 5.59e-15 | 61 |
cerebral hemisphere | 9.14e-15 | 32 |
regional part of telencephalon | 2.04e-14 | 32 |
regional part of cerebral cortex | 2.30e-14 | 22 |
neocortex | 2.65e-13 | 20 |
ecto-epithelium | 5.17e-12 | 104 |
cerebral cortex | 4.58e-11 | 25 |
pallium | 4.58e-11 | 25 |
ectoderm-derived structure | 3.30e-10 | 171 |
ectoderm | 3.30e-10 | 171 |
presumptive ectoderm | 3.30e-10 | 171 |
posterior neural tube | 6.27e-07 | 15 |
chordal neural plate | 6.27e-07 | 15 |
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