FFCP PHASE1:Hg19::chr11:47611749..47611769,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C430|description=CAGE_peak_at_chr11:47611749..47611769,-|id=chr11:47611749..47611769,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002577;2.46e-11;3!CL:0002603;8.46e-11;3!CL:0000128;7.49e-08;7!CL:0000126;7.49e-08;7!CL:0000127;7.49e-08;7|ontology_enrichment_celltype_v019_2=CL:0002577,2.05e-11,3;CL:0002603,4.70e-11,3;CL:0000128,7.53e-08,7;CL:0000126,7.53e-08,7;CL:0000127,7.53e-08,7;CL:0002453,7.53e-08,7|ontology_enrichment_development_v019=UBERON:0006215;3.48e-11;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003075!1.31e-18!86;UBERON:0007284!1.31e-18!86;UBERON:0000481!1.72e-18!347;UBERON:0002346!4.66e-17!90;UBERON:0003056!5.31e-15!61;UBERON:0000153!6.80e-15!129;UBERON:0007811!6.80e-15!129;UBERON:0001049!2.16e-14!57;UBERON:0005068!2.16e-14!57;UBERON:0006241!2.16e-14!57;UBERON:0007135!2.16e-14!57;UBERON:0002616!2.48e-14!59;UBERON:0005743!6.98e-14!86;UBERON:0000033!1.13e-13!123;UBERON:0000922!2.53e-13!612;UBERON:0000073!1.05e-12!94;UBERON:0001016!1.05e-12!94;UBERON:0004121!3.92e-12!169;UBERON:0000119!5.44e-12!312;UBERON:0002050!6.83e-12!605;UBERON:0005423!6.83e-12!605;UBERON:0001017!1.05e-11!82;UBERON:0000468!1.26e-11!659;UBERON:0000483!1.31e-11!309;UBERON:0000064!1.79e-11!219;UBERON:0007023!1.86e-11!115;UBERON:0000924!2.07e-11!173;UBERON:0006601!2.07e-11!173;UBERON:0000923!2.24e-11!604;UBERON:0005291!2.24e-11!604;UBERON:0006598!2.24e-11!604;UBERON:0002532!2.24e-11!604;UBERON:0000955!2.32e-10!69;UBERON:0006238!2.32e-10!69;UBERON:0000475!6.05e-10!365;UBERON:0002680!9.37e-10!9;UBERON:0001895!9.37e-10!9;UBERON:0010092!9.37e-10!9;UBERON:0000020!1.31e-09!23;UBERON:0002780!3.17e-09!41;UBERON:0001890!3.17e-09!41;UBERON:0006240!3.17e-09!41;UBERON:0000062!4.09e-09!511;UBERON:0002020!4.10e-09!34;UBERON:0003528!4.10e-09!34;UBERON:0000467!4.32e-09!625;UBERON:0000480!5.27e-09!626;UBERON:0001032!5.35e-09!24;UBERON:0004456!5.35e-09!24;UBERON:0003080!7.66e-09!42;UBERON:0000970!1.01e-08!20;UBERON:0000477!1.88e-08!286;UBERON:0002791!2.30e-08!33;UBERON:0002037!2.80e-08!6;UBERON:0006215!2.80e-08!6;UBERON:0002104!4.22e-08!21;UBERON:0000956!4.47e-08!25;UBERON:0000203!4.47e-08!25;UBERON:0007625!4.61e-08!11;UBERON:0001869!5.10e-08!32;UBERON:0001893!5.89e-08!34;UBERON:0000479!7.38e-08!787;UBERON:0000019!8.81e-08!19;UBERON:0000047!8.81e-08!19;UBERON:0004088!8.81e-08!19;UBERON:0003072!8.81e-08!19;UBERON:0003071!8.81e-08!19;UBERON:0004128!8.81e-08!19;UBERON:0003076!2.19e-07!15;UBERON:0003057!2.19e-07!15|ontology_enrichment_uberon_v019=UBERON:0002037;2.98e-20;6!UBERON:0002680;2.80e-13;9!UBERON:0001895;2.80e-13;9!UBERON:0000922;1.34e-12;49!UBERON:0004733;8.71e-10;12!UBERON:0002028;8.71e-10;12!UBERON:0004732;5.58e-09;13!UBERON:0001987;1.34e-08;4!UBERON:0000007;4.36e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.12e-20,6;UBERON:0006215,1.12e-20,6;UBERON:0002680,1.49e-13,9;UBERON:0001895,1.49e-13,9;UBERON:0010092,1.49e-13,9;UBERON:0003076,1.44e-10,15;UBERON:0003057,1.44e-10,15;UBERON:0001049,3.43e-10,56;UBERON:0005068,3.43e-10,56;UBERON:0006241,3.43e-10,56;UBERON:0007135,3.43e-10,56;UBERON:0003075,3.84e-10,82;UBERON:0007284,3.84e-10,82;UBERON:0004733,5.49e-10,12;UBERON:0002028,5.49e-10,12;UBERON:0007277,5.49e-10,12;UBERON:0002346,1.80e-09,86;UBERON:0000073,2.16e-09,53;UBERON:0002616,2.16e-09,53;UBERON:0004732,3.66e-09,13;UBERON:0010371,4.64e-09,104;UBERON:0001987,1.17e-08,4;UBERON:0004340,1.17e-08,4;UBERON:0010314,1.30e-08,132;UBERON:0000007,3.14e-08,2;UBERON:0001017,5.04e-08,81;UBERON:0000922,2.74e-07,592;UBERON:0002050,6.02e-07,564;UBERON:0001016,7.16e-07,89;UBERON:0005795,8.43e-07,22;UBERON:0004121,9.48e-07,171;UBERON:0000924,9.48e-07,171;UBERON:0006601,9.48e-07,171|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.873765488520689,1.05506791291381,0.247532705920093,0.331397375727916,0,0,0,0,1.84681587115182,1.42800483870977,2.82109249330279,0.85870796139317,0.958120975510189,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,0,0,0,0,0.486634870302636,0.850813354476611,1.33037638477538,0.702678285545008,0.785874452986276,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535798369704479,1.79623498100936,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0.311211035399766,0.134710672069688,0,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0,0.469737994575059,0.161872944368132,0.702254033511242,0,0.368502951935304,0,0,0.247266929278557,0.910161361938026,0,1.0100166837244,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.16164605681881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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C430 | |||
|description=CAGE_peak_at_chr11:47611749..47611769,- | |||
|id=chr11:47611749..47611769,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;2.46e-11;3!CL:0002603;8.46e-11;3!CL:0000128;7.49e-08;7!CL:0000126;7.49e-08;7!CL:0000127;7.49e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.05e-11,3;CL:0002603,4.70e-11,3;CL:0000128,7.53e-08,7;CL:0000126,7.53e-08,7;CL:0000127,7.53e-08,7;CL:0002453,7.53e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.48e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.31e-18!86;UBERON:0007284!1.31e-18!86;UBERON:0000481!1.72e-18!347;UBERON:0002346!4.66e-17!90;UBERON:0003056!5.31e-15!61;UBERON:0000153!6.80e-15!129;UBERON:0007811!6.80e-15!129;UBERON:0001049!2.16e-14!57;UBERON:0005068!2.16e-14!57;UBERON:0006241!2.16e-14!57;UBERON:0007135!2.16e-14!57;UBERON:0002616!2.48e-14!59;UBERON:0005743!6.98e-14!86;UBERON:0000033!1.13e-13!123;UBERON:0000922!2.53e-13!612;UBERON:0000073!1.05e-12!94;UBERON:0001016!1.05e-12!94;UBERON:0004121!3.92e-12!169;UBERON:0000119!5.44e-12!312;UBERON:0002050!6.83e-12!605;UBERON:0005423!6.83e-12!605;UBERON:0001017!1.05e-11!82;UBERON:0000468!1.26e-11!659;UBERON:0000483!1.31e-11!309;UBERON:0000064!1.79e-11!219;UBERON:0007023!1.86e-11!115;UBERON:0000924!2.07e-11!173;UBERON:0006601!2.07e-11!173;UBERON:0000923!2.24e-11!604;UBERON:0005291!2.24e-11!604;UBERON:0006598!2.24e-11!604;UBERON:0002532!2.24e-11!604;UBERON:0000955!2.32e-10!69;UBERON:0006238!2.32e-10!69;UBERON:0000475!6.05e-10!365;UBERON:0002680!9.37e-10!9;UBERON:0001895!9.37e-10!9;UBERON:0010092!9.37e-10!9;UBERON:0000020!1.31e-09!23;UBERON:0002780!3.17e-09!41;UBERON:0001890!3.17e-09!41;UBERON:0006240!3.17e-09!41;UBERON:0000062!4.09e-09!511;UBERON:0002020!4.10e-09!34;UBERON:0003528!4.10e-09!34;UBERON:0000467!4.32e-09!625;UBERON:0000480!5.27e-09!626;UBERON:0001032!5.35e-09!24;UBERON:0004456!5.35e-09!24;UBERON:0003080!7.66e-09!42;UBERON:0000970!1.01e-08!20;UBERON:0000477!1.88e-08!286;UBERON:0002791!2.30e-08!33;UBERON:0002037!2.80e-08!6;UBERON:0006215!2.80e-08!6;UBERON:0002104!4.22e-08!21;UBERON:0000956!4.47e-08!25;UBERON:0000203!4.47e-08!25;UBERON:0007625!4.61e-08!11;UBERON:0001869!5.10e-08!32;UBERON:0001893!5.89e-08!34;UBERON:0000479!7.38e-08!787;UBERON:0000019!8.81e-08!19;UBERON:0000047!8.81e-08!19;UBERON:0004088!8.81e-08!19;UBERON:0003072!8.81e-08!19;UBERON:0003071!8.81e-08!19;UBERON:0004128!8.81e-08!19;UBERON:0003076!2.19e-07!15;UBERON:0003057!2.19e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.98e-20;6!UBERON:0002680;2.80e-13;9!UBERON:0001895;2.80e-13;9!UBERON:0000922;1.34e-12;49!UBERON:0004733;8.71e-10;12!UBERON:0002028;8.71e-10;12!UBERON:0004732;5.58e-09;13!UBERON:0001987;1.34e-08;4!UBERON:0000007;4.36e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.12e-20,6;UBERON:0006215,1.12e-20,6;UBERON:0002680,1.49e-13,9;UBERON:0001895,1.49e-13,9;UBERON:0010092,1.49e-13,9;UBERON:0003076,1.44e-10,15;UBERON:0003057,1.44e-10,15;UBERON:0001049,3.43e-10,56;UBERON:0005068,3.43e-10,56;UBERON:0006241,3.43e-10,56;UBERON:0007135,3.43e-10,56;UBERON:0003075,3.84e-10,82;UBERON:0007284,3.84e-10,82;UBERON:0004733,5.49e-10,12;UBERON:0002028,5.49e-10,12;UBERON:0007277,5.49e-10,12;UBERON:0002346,1.80e-09,86;UBERON:0000073,2.16e-09,53;UBERON:0002616,2.16e-09,53;UBERON:0004732,3.66e-09,13;UBERON:0010371,4.64e-09,104;UBERON:0001987,1.17e-08,4;UBERON:0004340,1.17e-08,4;UBERON:0010314,1.30e-08,132;UBERON:0000007,3.14e-08,2;UBERON:0001017,5.04e-08,81;UBERON:0000922,2.74e-07,592;UBERON:0002050,6.02e-07,564;UBERON:0001016,7.16e-07,89;UBERON:0005795,8.43e-07,22;UBERON:0004121,9.48e-07,171;UBERON:0000924,9.48e-07,171;UBERON:0006601,9.48e-07,171 | |||
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| |||
|short_description=p@chr11:47611749..47611769,- | |||
}} |
Revision as of 18:01, 10 September 2013
Short description: | p@chr11:47611749..47611769, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:47611749..47611769, - |
Coexpression cluster: | C430_acute_giant_chronic_CD34_CD133_melanoma_skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.05e-11 | 3 |
astrocyte of the cerebellum | 4.70e-11 | 3 |
oligodendrocyte | 7.53e-08 | 7 |
macroglial cell | 7.53e-08 | 7 |
astrocyte | 7.53e-08 | 7 |
oligodendrocyte precursor cell | 7.53e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.12e-20 | 6 |
rhombic lip | 1.12e-20 | 6 |
regional part of metencephalon | 1.49e-13 | 9 |
metencephalon | 1.49e-13 | 9 |
future metencephalon | 1.49e-13 | 9 |
posterior neural tube | 1.44e-10 | 15 |
chordal neural plate | 1.44e-10 | 15 |
neural tube | 3.43e-10 | 56 |
neural rod | 3.43e-10 | 56 |
future spinal cord | 3.43e-10 | 56 |
neural keel | 3.43e-10 | 56 |
neural plate | 3.84e-10 | 82 |
presumptive neural plate | 3.84e-10 | 82 |
segmental subdivision of hindbrain | 5.49e-10 | 12 |
hindbrain | 5.49e-10 | 12 |
presumptive hindbrain | 5.49e-10 | 12 |
neurectoderm | 1.80e-09 | 86 |
regional part of nervous system | 2.16e-09 | 53 |
regional part of brain | 2.16e-09 | 53 |
segmental subdivision of nervous system | 3.66e-09 | 13 |
ecto-epithelium | 4.64e-09 | 104 |
placenta | 1.17e-08 | 4 |
allantois | 1.17e-08 | 4 |
structure with developmental contribution from neural crest | 1.30e-08 | 132 |
pituitary gland | 3.14e-08 | 2 |
central nervous system | 5.04e-08 | 81 |
embryo | 2.74e-07 | 592 |
embryonic structure | 6.02e-07 | 564 |
nervous system | 7.16e-07 | 89 |
embryonic uterus | 8.43e-07 | 22 |
ectoderm-derived structure | 9.48e-07 | 171 |
ectoderm | 9.48e-07 | 171 |
presumptive ectoderm | 9.48e-07 | 171 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.