FFCP PHASE1:Hg19::chr11:58869776..58869807,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C47|description=CAGE_peak_at_chr11:58869776..58869807,-|id=chr11:58869776..58869807,-|ontology_enrichment_celltype=CL:0000945!7.81e-34!24;CL:0000826!7.81e-34!24;CL:0000236!5.29e-22!14;CL:0000542!1.20e-12!53;CL:0000051!1.20e-12!53;CL:0000838!1.15e-11!52;CL:0002322!5.52e-09!5;CL:0000037!1.64e-08!172;CL:0000566!1.64e-08!172;CL:0002087!4.58e-08!119;CL:0000738!9.60e-08!140;CL:0000988!2.00e-07!182|ontology_enrichment_celltype_v019=CL:0000945;1.44e-62;24!CL:0000236;4.58e-53;13!CL:0000542;3.19e-20;53!CL:0002322;1.05e-08;5|ontology_enrichment_celltype_v019_2=CL:0000945,1.09e-62,24;CL:0000826,1.09e-62,24;CL:0000236,1.55e-57,14;CL:0000542,3.62e-29,53;CL:0000051,3.62e-29,53;CL:0000838,1.32e-26,52;CL:0002087,6.62e-11,115;CL:0000785,7.59e-11,2;CL:0000955,7.59e-11,2;CL:0000818,7.59e-11,2;CL:0000954,7.59e-11,2;CL:0000816,7.59e-11,2;CL:0000738,1.19e-09,136;CL:0002031,4.68e-09,120;CL:0002322,1.54e-08,5;CL:0000817,1.69e-07,3;CL:0000037,5.38e-07,168|ontology_enrichment_development_v019=CL:0000051;3.19e-20;53!CL:0000954;7.04e-11;2!UBERON:0004872;8.38e-11;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;3.21e-12;10|ontology_enrichment_disease_v019_2=DOID:0060058,3.29e-12,10|ontology_enrichment_uberon=UBERON:0000178!1.21e-07!15;UBERON:0000179!1.21e-07!15;UBERON:0000463!1.21e-07!15|ontology_enrichment_uberon_v019=UBERON:0002106;1.16e-14;3!UBERON:0004177;5.47e-09;5!UBERON:0005057;5.47e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.23e-15,3;UBERON:0004854,9.23e-15,3;UBERON:0009034,9.23e-15,3;UBERON:0002095,9.23e-15,3;UBERON:0004782,9.23e-15,3;UBERON:0003281,9.23e-15,3;UBERON:0009664,9.23e-15,3;UBERON:0002296,9.23e-15,3;UBERON:0005602,9.23e-15,3;UBERON:0001179,9.23e-15,3;UBERON:0006293,9.23e-15,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.492603536699674,0.865818594450472,0,0,0,0,0,0,3.79589282843478,2.55904618477359,0.880801318004542,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0.209658645508376,0,0,0,0,0,0,19.3595868907455,21.8455444504853,26.6852776159066,12.8019066769952,20.8205913258726,28.7376219977242,13.8819423284821,21.9432363543134,9.67662047486062,5.87237189370939,6.88091810625412,1.32171328579026,1.12101712596307,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,0.927708378250397,1.04574548582567,0.725627385107593,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,1.13929437434833,2.62054953003568,3.70226045777575,1.29694662238543,0.540031437238115,0,0,0,0.245040215981032,2.78704762688578,0,0,0,0,0.5745161103971,0,0,0,0,0.156679895773023,0,0,0,0,0.851692475380653,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.93398740871803,0,0,3.81562896929315,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0.520855522170466,0,0,0,0.508507300585533,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,18.7928432892136,0.19566461893209,0,0,1.20990716048664,1.53036380815245,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.321506296930038,0.412618309791701,0.83088067605837,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0.395223263795889,41.5312760478855,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34064966502131,0,0,0,0.064229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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_at_chr11:58869776..58869807,- | |||
|id=chr11:58869776..58869807,- | |||
|ontology_enrichment_celltype=CL:0000945!7.81e-34!24;CL:0000826!7.81e-34!24;CL:0000236!5.29e-22!14;CL:0000542!1.20e-12!53;CL:0000051!1.20e-12!53;CL:0000838!1.15e-11!52;CL:0002322!5.52e-09!5;CL:0000037!1.64e-08!172;CL:0000566!1.64e-08!172;CL:0002087!4.58e-08!119;CL:0000738!9.60e-08!140;CL:0000988!2.00e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.44e-62;24!CL:0000236;4.58e-53;13!CL:0000542;3.19e-20;53!CL:0002322;1.05e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.09e-62,24;CL:0000826,1.09e-62,24;CL:0000236,1.55e-57,14;CL:0000542,3.62e-29,53;CL:0000051,3.62e-29,53;CL:0000838,1.32e-26,52;CL:0002087,6.62e-11,115;CL:0000785,7.59e-11,2;CL:0000955,7.59e-11,2;CL:0000818,7.59e-11,2;CL:0000954,7.59e-11,2;CL:0000816,7.59e-11,2;CL:0000738,1.19e-09,136;CL:0002031,4.68e-09,120;CL:0002322,1.54e-08,5;CL:0000817,1.69e-07,3;CL:0000037,5.38e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;3.19e-20;53!CL:0000954;7.04e-11;2!UBERON:0004872;8.38e-11;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.21e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.29e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.21e-07!15;UBERON:0000179!1.21e-07!15;UBERON:0000463!1.21e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.16e-14;3!UBERON:0004177;5.47e-09;5!UBERON:0005057;5.47e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.23e-15,3;UBERON:0004854,9.23e-15,3;UBERON:0009034,9.23e-15,3;UBERON:0002095,9.23e-15,3;UBERON:0004782,9.23e-15,3;UBERON:0003281,9.23e-15,3;UBERON:0009664,9.23e-15,3;UBERON:0002296,9.23e-15,3;UBERON:0005602,9.23e-15,3;UBERON:0001179,9.23e-15,3;UBERON:0006293,9.23e-15,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.492603536699674,0.865818594450472,0,0,0,0,0,0,3.79589282843478,2.55904618477359,0.880801318004542,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0.209658645508376,0,0,0,0,0,0,19.3595868907455,21.8455444504853,26.6852776159066,12.8019066769952,20.8205913258726,28.7376219977242,13.8819423284821,21.9432363543134,9.67662047486062,5.87237189370939,6.88091810625412,1.32171328579026,1.12101712596307,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,0.927708378250397,1.04574548582567,0.725627385107593,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,1.13929437434833,2.62054953003568,3.70226045777575,1.29694662238543,0.540031437238115,0,0,0,0.245040215981032,2.78704762688578,0,0,0,0,0.5745161103971,0,0,0,0,0.156679895773023,0,0,0,0,0.851692475380653,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.93398740871803,0,0,3.81562896929315,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0.520855522170466,0,0,0,0.508507300585533,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,18.7928432892136,0.19566461893209,0,0,1.20990716048664,1.53036380815245,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.321506296930038,0.412618309791701,0.83088067605837,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0.395223263795889,41.5312760478855,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34064966502131,0,0,0,0.0642292250964595,0,0,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.739280431085226,0,0,0,0,1.64092442705466,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,3.11131766400604,0,0,0,0.118193840883968,0,0.235479278551542,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50962843566674,0.154348316215889,0,0,0,0,0,0,0.4226557275834,0,1.31577485171795,1.61144719933943,14.091702985415,0,0,0.160482733378337,0,0,0,0,0,1.30905207102113,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.227336094654718,0.535928260312357,0,0,0,0.952257725854961,0.129177819672012,0.0620747142958579,0.224263725161227,0,0,0,0,2.76143417359809,0.143444410785353,0,0,0,0,0.0898252021065869,0,0,0,0,1.40891655513718,1.9234109538194 | |||
|short_description=p@chr11:58869776..58869807,- | |||
}} |
Revision as of 18:14, 10 September 2013
Short description: | p@chr11:58869776..58869807, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58869776..58869807, - |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.09e-62 | 24 |
pro-B cell | 1.09e-62 | 24 |
B cell | 1.55e-57 | 14 |
lymphocyte | 3.62e-29 | 53 |
common lymphoid progenitor | 3.62e-29 | 53 |
lymphoid lineage restricted progenitor cell | 1.32e-26 | 52 |
nongranular leukocyte | 6.62e-11 | 115 |
mature B cell | 7.59e-11 | 2 |
pre-B-II cell | 7.59e-11 | 2 |
transitional stage B cell | 7.59e-11 | 2 |
small pre-B-II cell | 7.59e-11 | 2 |
immature B cell | 7.59e-11 | 2 |
leukocyte | 1.19e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 4.68e-09 | 120 |
embryonic stem cell | 1.54e-08 | 5 |
precursor B cell | 1.69e-07 | 3 |
hematopoietic stem cell | 5.38e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
spleen | 9.23e-15 | 3 |
gastrointestinal system mesentery | 9.23e-15 | 3 |
stomach region | 9.23e-15 | 3 |
mesentery | 9.23e-15 | 3 |
gastrointestinal system serosa | 9.23e-15 | 3 |
mesentery of stomach | 9.23e-15 | 3 |
gut mesentery | 9.23e-15 | 3 |
dorsal mesentery | 9.23e-15 | 3 |
dorsal mesogastrium | 9.23e-15 | 3 |
peritoneal cavity | 9.23e-15 | 3 |
spleen primordium | 9.23e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.29e-12 | 10 |
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