FFCP PHASE1:Hg19::chr11:61687750..61687761,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5866|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9780|TSSclassifier=S|UniProt=|association_with_transcript=-9bp_to_ENST00000301773,uc001nsp.2_5end|coexpression_cluster_id=C33|description=CAGE_peak_3_at_RAB3IL1_5end|id=chr11:61687750..61687761,-|ontology_enrichment_celltype=CL:0000764!1.68e-07!2;CL:0000765!1.68e-07!2;CL:0000050!1.68e-07!2;CL:0000038!1.68e-07!2;CL:0000558!1.68e-07!2;CL:0000547!1.68e-07!2;CL:0000549!1.68e-07!2;CL:0000550!1.68e-07!2;CL:0000552!1.68e-07!2|ontology_enrichment_celltype_v019=CL:0000764;5.34e-20;2!CL:0000558;5.34e-20;2|ontology_enrichment_celltype_v019_2=CL:0000764,5.34e-20,2;CL:0000765,5.34e-20,2;CL:0000050,5.34e-20,2;CL:0000038,5.34e-20,2;CL:0000558,5.34e-20,2;CL:0000547,5.34e-20,2;CL:0000549,5.34e-20,2;CL:0000550,5.34e-20,2;CL:0000552,5.34e-20,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1036!1.79e-09!8|ontology_enrichment_disease_v019=DOID:1036;1.83e-18;8!DOID:8552;3.45e-10;1!DOID:8692;2.00e-07;31|ontology_enrichment_disease_v019_2=DOID:1036,1.83e-18,8;DOID:8552,2.50e-10,1;DOID:8692,3.35e-07,31|ontology_enrichment_uberon=UBERON:0007023!5.83e-28!115;UBERON:0000178!4.56e-15!15;UBERON:0000179!4.56e-15!15;UBERON:0000463!4.56e-15!15|ontology_enrichment_uberon_v019=UBERON:0000178;1.91e-29;15!UBERON:0000179;1.91e-29;15!UBERON:0000463;1.91e-29;15!UBERON:0002390;7.00e-17;32!UBERON:0002193;1.31e-09;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.91e-29,15;UBERON:0000179,1.91e-29,15;UBERON:0000463,1.91e-29,15;UBERON:0007023,1.29e-09,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5141290214882,25.8821096514652,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,12.1787426215721,9.1756464857085,9.1143549947866,0.714695326373367,0.411362273086194,6.48473311192717,4.32025149790492,9.51750211553125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,1.99454018280188,5.18870019419516,4.50943828930801,2.85296697858933,5.123350783553,0.953619473882272,0,0,0.424059214301822,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,1.10154635083496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6005511129777,0,0,1.36869470307464,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,1.96703604453562,0,0.490296643507811,0,0.196308467114945,0,0,0,0,1.86927875123374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,1.97024615367422,1.07185652062471,0,0,1.27940389140589,0.23806443146374,0.0645889098360061,0,0,0.190941474834495,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p3@RAB3IL1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5866 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9780 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_ENST00000301773,uc001nsp.2_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_3_at_RAB3IL1_5end | |||
|id=chr11:61687750..61687761,- | |||
|ontology_enrichment_celltype=CL:0000764!1.68e-07!2;CL:0000765!1.68e-07!2;CL:0000050!1.68e-07!2;CL:0000038!1.68e-07!2;CL:0000558!1.68e-07!2;CL:0000547!1.68e-07!2;CL:0000549!1.68e-07!2;CL:0000550!1.68e-07!2;CL:0000552!1.68e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;5.34e-20;2!CL:0000558;5.34e-20;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.34e-20,2;CL:0000765,5.34e-20,2;CL:0000050,5.34e-20,2;CL:0000038,5.34e-20,2;CL:0000558,5.34e-20,2;CL:0000547,5.34e-20,2;CL:0000549,5.34e-20,2;CL:0000550,5.34e-20,2;CL:0000552,5.34e-20,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.79e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.83e-18;8!DOID:8552;3.45e-10;1!DOID:8692;2.00e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.83e-18,8;DOID:8552,2.50e-10,1;DOID:8692,3.35e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.83e-28!115;UBERON:0000178!4.56e-15!15;UBERON:0000179!4.56e-15!15;UBERON:0000463!4.56e-15!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.91e-29;15!UBERON:0000179;1.91e-29;15!UBERON:0000463;1.91e-29;15!UBERON:0002390;7.00e-17;32!UBERON:0002193;1.31e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.91e-29,15;UBERON:0000179,1.91e-29,15;UBERON:0000463,1.91e-29,15;UBERON:0007023,1.29e-09,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5141290214882,25.8821096514652,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,12.1787426215721,9.1756464857085,9.1143549947866,0.714695326373367,0.411362273086194,6.48473311192717,4.32025149790492,9.51750211553125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,1.99454018280188,5.18870019419516,4.50943828930801,2.85296697858933,5.123350783553,0.953619473882272,0,0,0.424059214301822,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,1.10154635083496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6005511129777,0,0,1.36869470307464,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,1.96703604453562,0,0.490296643507811,0,0.196308467114945,0,0,0,0,1.86927875123374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,1.97024615367422,1.07185652062471,0,0,1.27940389140589,0.23806443146374,0.0645889098360061,0,0,0.190941474834495,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p3@RAB3IL1 | |||
}} |
Revision as of 18:27, 10 September 2013
Short description: | p3@RAB3IL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RAB3IL1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -9bp_to_ENST00000301773, uc001nsp.2_5end |
EntrezGene: | RAB3IL1 |
HGNC: | 9780 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.34e-20 | 2 |
erythroblast | 5.34e-20 | 2 |
megakaryocyte-erythroid progenitor cell | 5.34e-20 | 2 |
erythroid progenitor cell | 5.34e-20 | 2 |
reticulocyte | 5.34e-20 | 2 |
proerythroblast | 5.34e-20 | 2 |
basophilic erythroblast | 5.34e-20 | 2 |
polychromatophilic erythroblast | 5.34e-20 | 2 |
orthochromatic erythroblast | 5.34e-20 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.91e-29 | 15 |
haemolymphatic fluid | 1.91e-29 | 15 |
organism substance | 1.91e-29 | 15 |
adult organism | 1.29e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.83e-18 | 8 |
chronic myeloid leukemia | 2.50e-10 | 1 |
myeloid leukemia | 3.35e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.