FFCP PHASE1:Hg19::chr11:67811213..67811268,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10312|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11647|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000525724,uc001onh.2_5end|description=CAGE_peak_3_at_TCIRG1_5end|id=chr11:67811213..67811268,+|ontology_enrichment_celltype=CL:0000055!3.17e-14!180;CL:0000057!5.20e-14!75;CL:0002620!9.47e-09!23;CL:0002570!5.96e-08!8;CL:0000183!9.35e-08!59;CL:0000680!2.62e-07!57;CL:0000056!2.62e-07!57;CL:0000355!2.62e-07!57;CL:0000187!5.30e-07!54|ontology_enrichment_celltype_v019=CL:0002570;5.94e-13;8!CL:0000097;4.18e-08;5|ontology_enrichment_celltype_v019_2=CL:0002570,6.41e-13,8;CL:0000057,2.73e-10,76;CL:0000097,2.22e-08,5;CL:0002028,2.22e-08,5;CL:0000723,8.36e-08,433;CL:0000192,9.48e-08,43;CL:0000514,9.48e-08,43;CL:0000048,9.98e-08,427;CL:0000034,2.80e-07,441|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!1.58e-10!365;UBERON:0004290!1.79e-08!70;UBERON:0001013!2.47e-08!14;UBERON:0000479!2.94e-08!787;UBERON:0002385!8.65e-08!63;UBERON:0001015!8.65e-08!63;UBERON:0000383!8.65e-08!63;UBERON:0001134!9.94e-08!61;UBERON:0002036!9.94e-08!61;UBERON:0003082!9.94e-08!61;UBERON:0002200!1.44e-07!11;UBERON:0006876!1.44e-07!11;UBERON:0000914!3.42e-07!83;UBERON:0002329!3.42e-07!83;UBERON:0003077!3.42e-07!83;UBERON:0003059!3.42e-07!83;UBERON:0007282!3.42e-07!83;UBERON:0009618!3.42e-07!83;UBERON:0007285!3.42e-07!83;UBERON:0000468!4.17e-07!659|ontology_enrichment_uberon_v019=UBERON:0001013;1.37e-14;14!UBERON:0005284;1.51e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.75e-14,14;UBERON:0005284,1.27e-08,5;UBERON:0002385,3.36e-07,64;UBERON:0001015,3.36e-07,64;UBERON:0000383,3.36e-07,64;UBERON:0001134,6.55e-07,62;UBERON:0002036,6.55e-07,62;UBERON:0003082,6.55e-07,62|phase1_expression=0.363356758541113,2.99740733447376,0.422863212287913,0,0,2.61701557230111,0,3.15859936713415,0,0,0,0,0.263766978228454,0,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0,0,0,0.300353785683013,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0.189069634328136,0.665188192387692,0.614843499851882,0.196468613246569,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0,0,0,0,1.24484414159907,0,0.163461903113459,4.8434376846378,3.45705554687999,0.70296429550139,1.24864030732128,0.570471821544449,1.19558944441441,0.117434498643765,0.323745888736263,0.421352420106746,7.96201267894084,0.368502951935304,8.26606249406124,0,0.247266929278557,1.82032272387605,2.87447256726495,0.168336113954066,1.12606667884768,2.49357703935765,0,0,0,0,1.4351170855109,0.213557388818567,0.211931901159562,0,0,0.515281080091258,0.37223371266318,10.6329089311998,0.487185025805993,0.504867548488229,0.368199594569197,0.80823028409406,7.4552014428489,1.30977727695932,2.7129694769678,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.173610169971,2.94017422771084,0,0,0,0,3.81264159483652,3.08822058537346,0,0,0,0,0,0,0,0.927443239800615,0,0,0,0,0,0,0,2.34004265139238,0.891786973732369,0,0,0,0,0,0,1.97065295158377,1.84901711427775,10.9883901236609,7.20599767084807,7.32206113873004,0.253991577168676,0,0,0,0,0,0,4.82163662685051,2.61576041299968,3.44689943358465,2.58543431515556,82.260982545933,5.071816515336,10.3715865468099,32.2423054425235,0,0,0,5.57614175266775,48.8359444852299,2.46972101034231,2.28015329005615,3.909311436168,0.791951872933429,0,0,0,0,0.502257091432126,0,0,0,0,2.75084482668401,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0,0,0,0,0,0,0,0,0,3.64911180765948,11.7480694477644,4.11772108573027,0,0,0,0,3.32870879020994,0.604780586659361,0.496215615637554,1.68808170616869,1.40330047216537,1.15325234330131,2.55853624533352,1.76939313257968,1.48418066444991,0.154209693802656,2.30830242907065,2.13530605635904,0,0.464841513839837,0.483437798366489,0,0,2.87036120411517,1.27463817604702,8.78533580228142,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,1.08378575017541,0,0,0,0.447749509444357,0,0,2.3080511260475,4.92021968549559,0.976135183992909,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.275673144969061,0.859361958946189,1.74020032697074,0.596586391912706,0.356128142586949,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,12.6533845582287,3.79655309662471,2.85945290885737,0.255897791311334,1.71175595213568,1.27281299170375,0,9.713112709499,11.8050922786504,8.48249296888942,0,1.585103211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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10312 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11647 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000525724,uc001onh.2_5end | |||
|description=CAGE_peak_3_at_TCIRG1_5end | |||
|id=chr11:67811213..67811268,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.17e-14!180;CL:0000057!5.20e-14!75;CL:0002620!9.47e-09!23;CL:0002570!5.96e-08!8;CL:0000183!9.35e-08!59;CL:0000680!2.62e-07!57;CL:0000056!2.62e-07!57;CL:0000355!2.62e-07!57;CL:0000187!5.30e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002570;5.94e-13;8!CL:0000097;4.18e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,6.41e-13,8;CL:0000057,2.73e-10,76;CL:0000097,2.22e-08,5;CL:0002028,2.22e-08,5;CL:0000723,8.36e-08,433;CL:0000192,9.48e-08,43;CL:0000514,9.48e-08,43;CL:0000048,9.98e-08,427;CL:0000034,2.80e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.58e-10!365;UBERON:0004290!1.79e-08!70;UBERON:0001013!2.47e-08!14;UBERON:0000479!2.94e-08!787;UBERON:0002385!8.65e-08!63;UBERON:0001015!8.65e-08!63;UBERON:0000383!8.65e-08!63;UBERON:0001134!9.94e-08!61;UBERON:0002036!9.94e-08!61;UBERON:0003082!9.94e-08!61;UBERON:0002200!1.44e-07!11;UBERON:0006876!1.44e-07!11;UBERON:0000914!3.42e-07!83;UBERON:0002329!3.42e-07!83;UBERON:0003077!3.42e-07!83;UBERON:0003059!3.42e-07!83;UBERON:0007282!3.42e-07!83;UBERON:0009618!3.42e-07!83;UBERON:0007285!3.42e-07!83;UBERON:0000468!4.17e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.37e-14;14!UBERON:0005284;1.51e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.75e-14,14;UBERON:0005284,1.27e-08,5;UBERON:0002385,3.36e-07,64;UBERON:0001015,3.36e-07,64;UBERON:0000383,3.36e-07,64;UBERON:0001134,6.55e-07,62;UBERON:0002036,6.55e-07,62;UBERON:0003082,6.55e-07,62 | |||
|phase1_expression=0.363356758541113,2.99740733447376,0.422863212287913,0,0,2.61701557230111,0,3.15859936713415,0,0,0,0,0.263766978228454,0,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0,0,0,0.300353785683013,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0.189069634328136,0.665188192387692,0.614843499851882,0.196468613246569,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0,0,0,0,1.24484414159907,0,0.163461903113459,4.8434376846378,3.45705554687999,0.70296429550139,1.24864030732128,0.570471821544449,1.19558944441441,0.117434498643765,0.323745888736263,0.421352420106746,7.96201267894084,0.368502951935304,8.26606249406124,0,0.247266929278557,1.82032272387605,2.87447256726495,0.168336113954066,1.12606667884768,2.49357703935765,0,0,0,0,1.4351170855109,0.213557388818567,0.211931901159562,0,0,0.515281080091258,0.37223371266318,10.6329089311998,0.487185025805993,0.504867548488229,0.368199594569197,0.80823028409406,7.4552014428489,1.30977727695932,2.7129694769678,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.173610169971,2.94017422771084,0,0,0,0,3.81264159483652,3.08822058537346,0,0,0,0,0,0,0,0.927443239800615,0,0,0,0,0,0,0,2.34004265139238,0.891786973732369,0,0,0,0,0,0,1.97065295158377,1.84901711427775,10.9883901236609,7.20599767084807,7.32206113873004,0.253991577168676,0,0,0,0,0,0,4.82163662685051,2.61576041299968,3.44689943358465,2.58543431515556,82.260982545933,5.071816515336,10.3715865468099,32.2423054425235,0,0,0,5.57614175266775,48.8359444852299,2.46972101034231,2.28015329005615,3.909311436168,0.791951872933429,0,0,0,0,0.502257091432126,0,0,0,0,2.75084482668401,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0,0,0,0,0,0,0,0,0,3.64911180765948,11.7480694477644,4.11772108573027,0,0,0,0,3.32870879020994,0.604780586659361,0.496215615637554,1.68808170616869,1.40330047216537,1.15325234330131,2.55853624533352,1.76939313257968,1.48418066444991,0.154209693802656,2.30830242907065,2.13530605635904,0,0.464841513839837,0.483437798366489,0,0,2.87036120411517,1.27463817604702,8.78533580228142,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,1.08378575017541,0,0,0,0.447749509444357,0,0,2.3080511260475,4.92021968549559,0.976135183992909,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.275673144969061,0.859361958946189,1.74020032697074,0.596586391912706,0.356128142586949,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,12.6533845582287,3.79655309662471,2.85945290885737,0.255897791311334,1.71175595213568,1.27281299170375,0,9.713112709499,11.8050922786504,8.48249296888942,0,1.58510321173008,0,10.727942259971,0,0,12.0119922039027,7.21167702963935,2.26016233240486,0,0,0,2.31510213706675,3.9353685122798,0,0.92947049429925,0.845086807596724,2.29458163526482,2.55447506634115,0,11.7071151143297,0,0,0.75894634753143,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,1.52927441428475,0,0,0,0,0,0,0.534120355637366,0,0,0.371606350251437,0,0,0,0,0,0,9.73865820823666,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0,0.556812347790485,1.23087398947712,0,0,0,0,2.19762268907841,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,1.22722419002586,0,0,0,0.716084698702437,0.511572370226872,1.1837208676432,0,0,0,0,0,0,0,0,0,0,0,5.17115059862197,0,0,0.885741385813839,0.241192877250816,1.52581736317083,0,0.591095237907095,0.219385397153973,0,0,8.31062791841008,0,0,0,0,0.638002319463839,1.4655614944298,0,0,1.2558420511602,0,0,0,0,0.189753732724185,0,0,0,0,0,0.995261931078505,0.0884575645033392,1.22206028986725,0,0,0,0,5.61804353109152,0.702793337176017,0,0,0,1.97292201424695,3.62972148145992,0.30607276163049,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,2.79562669187248,0,0,0,0,0.193978032976839,1.6768664071385,1.12990370390266,0,0,0.189932387867636,0,0,0.213452994739353,0.39961921916426,0,0,0,0,0,0,24.7345655053978,27.928959965393,0,9.82432005665164,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0,2.21504428321048,0,0,0,1.68067843270016,0.39669780522807,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.221858103073705,0.310482014706917,0,0,0,0,0,9.36669811613763,0.579684114443301,6.56721132702246,1.63599316893057,5.54805861502613,0,0,1.77962244319307,0,2.7221566277383,1.70980920641059,0.147855149989634,0.63718706865481,0,1.55262956876259,4.97647449409027,0,0,0.150257608997218,0,0,0.18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| |||
|short_description=p3@TCIRG1 | |||
}} |
Revision as of 19:19, 10 September 2013
Short description: | p3@TCIRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TCIRG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000525724, uc001onh.2_5end |
EntrezGene: | TCIRG1 |
HGNC: | 11647 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 6.41e-13 | 8 |
fibroblast | 2.73e-10 | 76 |
mast cell | 2.22e-08 | 5 |
basophil mast progenitor cell | 2.22e-08 | 5 |
somatic stem cell | 8.36e-08 | 433 |
smooth muscle cell | 9.48e-08 | 43 |
smooth muscle myoblast | 9.48e-08 | 43 |
multi fate stem cell | 9.98e-08 | 427 |
stem cell | 2.80e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.75e-14 | 14 |
brain vasculature | 1.27e-08 | 5 |
muscle tissue | 3.36e-07 | 64 |
musculature | 3.36e-07 | 64 |
musculature of body | 3.36e-07 | 64 |
skeletal muscle tissue | 6.55e-07 | 62 |
striated muscle tissue | 6.55e-07 | 62 |
myotome | 6.55e-07 | 62 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.