FFCP PHASE1:Hg19::chr11:8739502..8739520,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6764|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11350|TSSclassifier=S|UniProt=E9PKE0|association_with_transcript=86bp_to_ENST00000533020_5end|description=CAGE_peak_13_at_ST5_5end|id=chr11:8739502..8739520,-|ontology_enrichment_celltype=CL:0000055!1.23e-16!180;CL:0000057!3.14e-13!75;CL:0002620!1.06e-08!23|ontology_enrichment_celltype_v019=CL:0000128;1.10e-10;7!CL:0000126;1.10e-10;7!CL:0000127;1.10e-10;7!CL:0000243;3.71e-09;15!CL:0000125;3.71e-09;15!CL:0002620;7.30e-09;23!CL:0000095;3.96e-08;17!CL:0002319;2.06e-07;25!CL:0000594;4.78e-07;3!CL:0002603;4.78e-07;3|ontology_enrichment_celltype_v019_2=CL:0000128,1.48e-10,7;CL:0000126,1.48e-10,7;CL:0000127,1.48e-10,7;CL:0002453,1.48e-10,7;CL:0000243,3.13e-09,15;CL:0000125,3.13e-09,15;CL:0000030,3.13e-09,15;CL:0000339,3.13e-09,15;CL:0002620,1.30e-08,23;CL:0000095,3.41e-08,17;CL:0000123,3.41e-08,17;CL:0002319,1.64e-07,25;CL:0000594,3.33e-07,3;CL:0002603,3.89e-07,3|ontology_enrichment_development_v019=CL:0000339;3.71e-09;15|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;6.55e-15;5!DOID:450;6.55e-15;5!DOID:66;6.55e-15;5!DOID:423;6.55e-15;5!DOID:0080000;6.55e-15;5!DOID:11722;6.55e-15;5|ontology_enrichment_disease_v019_2=DOID:17,1.23e-14,5;DOID:450,1.23e-14,5;DOID:66,1.23e-14,5;DOID:423,1.23e-14,5;DOID:0080000,1.23e-14,5;DOID:11722,1.23e-14,5|ontology_enrichment_uberon=UBERON:0000475!4.76e-17!365;UBERON:0000481!4.63e-10!347;UBERON:0000468!5.44e-08!659;UBERON:0005256!5.54e-08!143;UBERON:0000119!1.34e-07!312;UBERON:0002100!1.90e-07!216;UBERON:0000483!3.91e-07!309|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.908391896352783,0.428201047781966,0.986680828671798,0,0.446961094427288,0,0,0,0.261185628199839,1.22866968250754,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,1.23121058076788,0.816002764977012,1.56727360739044,0.286235987131057,0.958120975510189,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.767175371061182,0,0,0.434539556882471,0,0,0.661743720148475,0.665188192387692,0.351339142772504,0.654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0,0,0,1.68203280042692,0,0.24666754841716,0,0.269421344139376,1.14423332179421,0.454072282934794,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0.280901613404497,0.204154171254893,0.245668634623536,0.413303124703062,0,0.247266929278557,2.73048408581408,0.718618141816238,0.168336113954066,0.125118519871964,0,0.438977620880838,0.612975591598039,0.751190294532984,0.340296549480063,1.4351170855109,1.49490172172997,1.05965950579781,0.300091096084402,1.03052529238439,0,0.558350568994769,0.843881661206331,0.487185025805993,1.00973509697646,1.38074847963449,0.323292113637624,1.06502877754984,0.403008392910561,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0.651616610620649,0,0,0.927443239800615,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0.517086863031111,0,0,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,1.62786481617433,1.64648067356154,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.434343920002738,0.821905290201534,0.179060963239896,0,0,0,0,1.52456774533478,0,0,0.837581326671744,0.637938751653163,0,0,0,0,0,0.271265023699736,0.623912584592421,0.356857977594324,0.630809660135739,0.234282829985426,0.902838299183157,0,0,0,0,1.04260337361699,0.587403472388222,0,0,0,0,0,0,0.604780586659361,0.496215615637554,0.61384789315225,1.12264037773229,0.128139149255701,0,0.482561763430822,0,0,0.177561725313127,0.328508624055237,0,0.232420756919918,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,0,0,0,0.527758144464379,1.13733384070897,0,0.431831832204279,0,0.541892875087706,0.501689773854853,0,0,0.447749509444357,0,0,0,0.656029291399411,1.30151357865721,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,1.07834031980251,0.767518373630648,0.413509717453592,1.6113036730241,1.30515024522806,0.340906509664404,0.267096106940212,0,0.192190067365106,0,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0,0.511795582622668,0,0.636406495851874,0,0.179872457583315,0.823611089208164,0.353437207037059,0,0,0,0.975267478179181,0,0,0.136499911407986,0.424216295861138,0,1.10273068709225,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.430234056612155,0.88424136911809,0.3566710514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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6764 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11350 | |||
|TSSclassifier=S | |||
|UniProt=E9PKE0 | |||
|association_with_transcript=86bp_to_ENST00000533020_5end | |||
|description=CAGE_peak_13_at_ST5_5end | |||
|id=chr11:8739502..8739520,- | |||
|ontology_enrichment_celltype=CL:0000055!1.23e-16!180;CL:0000057!3.14e-13!75;CL:0002620!1.06e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000128;1.10e-10;7!CL:0000126;1.10e-10;7!CL:0000127;1.10e-10;7!CL:0000243;3.71e-09;15!CL:0000125;3.71e-09;15!CL:0002620;7.30e-09;23!CL:0000095;3.96e-08;17!CL:0002319;2.06e-07;25!CL:0000594;4.78e-07;3!CL:0002603;4.78e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.48e-10,7;CL:0000126,1.48e-10,7;CL:0000127,1.48e-10,7;CL:0002453,1.48e-10,7;CL:0000243,3.13e-09,15;CL:0000125,3.13e-09,15;CL:0000030,3.13e-09,15;CL:0000339,3.13e-09,15;CL:0002620,1.30e-08,23;CL:0000095,3.41e-08,17;CL:0000123,3.41e-08,17;CL:0002319,1.64e-07,25;CL:0000594,3.33e-07,3;CL:0002603,3.89e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000339;3.71e-09;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.55e-15;5!DOID:450;6.55e-15;5!DOID:66;6.55e-15;5!DOID:423;6.55e-15;5!DOID:0080000;6.55e-15;5!DOID:11722;6.55e-15;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.23e-14,5;DOID:450,1.23e-14,5;DOID:66,1.23e-14,5;DOID:423,1.23e-14,5;DOID:0080000,1.23e-14,5;DOID:11722,1.23e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!4.76e-17!365;UBERON:0000481!4.63e-10!347;UBERON:0000468!5.44e-08!659;UBERON:0005256!5.54e-08!143;UBERON:0000119!1.34e-07!312;UBERON:0002100!1.90e-07!216;UBERON:0000483!3.91e-07!309 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p13@ST5 | |||
}} |
Revision as of 20:05, 10 September 2013
Short description: | p13@ST5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_ST5_5end |
Coexpression cluster: | NA |
Association with transcript: | 86bp_to_ENST00000533020_5end |
EntrezGene: | ST5 |
HGNC: | 11350 |
UniProt: | E9PKE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.48e-10 | 7 |
macroglial cell | 1.48e-10 | 7 |
astrocyte | 1.48e-10 | 7 |
oligodendrocyte precursor cell | 1.48e-10 | 7 |
glial cell (sensu Vertebrata) | 3.13e-09 | 15 |
glial cell | 3.13e-09 | 15 |
glioblast | 3.13e-09 | 15 |
glioblast (sensu Vertebrata) | 3.13e-09 | 15 |
skin fibroblast | 1.30e-08 | 23 |
neuron associated cell | 3.41e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 3.41e-08 | 17 |
neural cell | 1.64e-07 | 25 |
skeletal muscle satellite cell | 3.33e-07 | 3 |
astrocyte of the cerebellum | 3.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.23e-14 | 5 |
myotonic disease | 1.23e-14 | 5 |
muscle tissue disease | 1.23e-14 | 5 |
myopathy | 1.23e-14 | 5 |
muscular disease | 1.23e-14 | 5 |
myotonic dystrophy | 1.23e-14 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.