FFCP PHASE1:Hg19::chr12:31457050..31457054,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:31457050..31457054,-|id=chr12:31457050..31457054,-|ontology_enrichment_celltype=CL:0000542!4.10e-14!53;CL:0000051!4.10e-14!53;CL:0000838!1.62e-13!52;CL:0000037!5.69e-08!172;CL:0000566!5.69e-08!172;CL:0000988!8.86e-08!182;CL:0002032!1.10e-07!165;CL:0000837!1.10e-07!165;CL:0000084!6.57e-07!25;CL:0000827!6.57e-07!25;CL:0002087!8.89e-07!119|ontology_enrichment_celltype_v019=CL:0000039;1.47e-16;7!CL:0000586;1.47e-16;7|ontology_enrichment_celltype_v019_2=CL:0000039,9.84e-17,7;CL:0000586,9.84e-17,7|ontology_enrichment_development_v019=UBERON:0009117;8.89e-12;10!UBERON:0005564;8.89e-12;10!UBERON:0008814;9.86e-08;2!UBERON:0010056;9.86e-08;2|ontology_enrichment_disease=DOID:162!2.25e-20!235;DOID:14566!3.36e-20!239;DOID:305!9.29e-17!106;DOID:0050687!5.92e-16!143;DOID:0050686!7.80e-10!137;DOID:2531!1.14e-07!51;DOID:0060083!1.14e-07!51|ontology_enrichment_disease_v019=DOID:1799;9.12e-14;1!DOID:10165;9.12e-14;1!DOID:1798;9.12e-14;1|ontology_enrichment_disease_v019_2=DOID:1799,4.53e-14,1;DOID:10165,4.53e-14,1;DOID:1798,4.53e-14,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000473;1.43e-14;8!UBERON:0005795;9.12e-14;1!UBERON:0003135;9.27e-11;11!UBERON:0000922;7.64e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.01e-14,8;UBERON:0003135,7.22e-11,11;UBERON:0002323,9.48e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.534893840235659,0.57470412614962,0.314843125254717,0,0.767658796194425,0,0,0,0,0.232401601740905,0.995184627411951,0.293600439334847,1.10799081706375,0,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,1.21079900526674,0,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0,0.32145117339416,0.285012743741249,0,0,0,0,0,1.28019066769952,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.616804496998528,0.167186495390678,0.651844533267181,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0,1.24930726552346,0.236777252044017,0,0.604820229674197,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.263504357079378,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0.121973706129595,0.265059536642971,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.448340575974109,0.197030760201927,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0.460511024178389,0,0.107420244868274,0.290033387828457,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0.371606350251437,0.144269212976445,0.142283686696828,0.159426272728822,0.199579371432817,0,0.635020748171649,0.649243880549111,0,0.456469358066384,0.156679895773023,5.01268954180134,0.169291777801603,0.1605880751037,0.605399121573143,0,0,0,0,0.333698283423817,0,0,0,0,0.33307196799782,0,0,0,0.242721043499027,0.111443384277478,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0.844501632511974,0,0,0.251932747854276,0.102268682502155,0.123084805461069,0,0.539210106883961,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0.344743373241465,0,0.347249989866585,0,0,0,0,0,0,0.32681539055697,0.139423744278603,0,0,0.69169171316418,0.359030577639089,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0.569261198172555,0,0.421996129056054,0.326465616318295,0,0,0,0.0884575645033392,0.611030144933625,1.18608451472249,0.247127877893006,0.104421949505455,0,0,0,0.547364367646998,0.19566461893209,0.728341138602278,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0,0,0,1.19472429772959,1.42304773014896,0,0,0.0979923974143777,0.174118413160805,0.17472666824203,0,0.19351266257817,0.146178634172371,0.164230914106418,0.0969890164884194,0,0,0,0,0,0.195551382734803,0.320635281006135,0.213452994739353,0,0.288180834308212,0.458146384663663,0.686379991447858,0.432164393964449,0.124252535565433,0.235694034616795,0,0.209205692624666,0,0,0,0,0,0,0.525774708558629,0,0,0.717873024576814,0,0,0,0,0,1.16495949527454,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0,0,0.412618309791701,0.415440338029185,0.449947783103001,0,0,0,0,0.104909176269996,0.422401346077626,0,0,0,0,0.25426853765475,0,0,0,0,0.492555124496034,0,0.113312091520126,0,0,0,0.13223260174269,0.684347351537318,0,0,0.157204305099666,0,0.992332043623902,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0.124980407962107,0,0,0.470531639396343,0.936669811613763,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0.337884881306145,0,0,0,0,0.779441235357554,0,0.981392365535065,0,0.245772908753719,0,0.19998739585493,0.426766918776564,0.344429959321631,0,0,0,0,0.127894371303652,0.539124056983409,0,0.327628914576042,0.33946505990805,0.850299680406731,0.123935764259002,0,0,0.552032215008773,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.785181748008205,0.11796972334774,0,2.07946199070609,0,0,0.198916222116275,0.150420656698515,0,0,1.83334686136996,0.49131575253029,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0.464965701472501,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0.111855431797792,0.196300467230486,0,0,0,0,0.485710993059139,0.233939463462106,0.198950775161368,0,0.5647304101948,0.439762066981716,0.301925687133347,0.231522474323834,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0,0.399764623699716,0.178553938605658,0,0.160482733378337,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0.126698501011437,1.83579893535567,1.3360870263278,1.19463369395298,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0.217716747896961,0.684466602170562,0.134704106029175,0,0,0.244209805832924,0.213454691755431,0,0.359300808426348,0,0,1.22068853494722,0,0,0.320568492303233|short_description=p@chr12:31457050..31457054,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:31457050..31457054,- | |||
|id=chr12:31457050..31457054,- | |||
|ontology_enrichment_celltype=CL:0000542!4.10e-14!53;CL:0000051!4.10e-14!53;CL:0000838!1.62e-13!52;CL:0000037!5.69e-08!172;CL:0000566!5.69e-08!172;CL:0000988!8.86e-08!182;CL:0002032!1.10e-07!165;CL:0000837!1.10e-07!165;CL:0000084!6.57e-07!25;CL:0000827!6.57e-07!25;CL:0002087!8.89e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.47e-16;7!CL:0000586;1.47e-16;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.84e-17,7;CL:0000586,9.84e-17,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.89e-12;10!UBERON:0005564;8.89e-12;10!UBERON:0008814;9.86e-08;2!UBERON:0010056;9.86e-08;2 | |||
|ontology_enrichment_disease=DOID:162!2.25e-20!235;DOID:14566!3.36e-20!239;DOID:305!9.29e-17!106;DOID:0050687!5.92e-16!143;DOID:0050686!7.80e-10!137;DOID:2531!1.14e-07!51;DOID:0060083!1.14e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1799;9.12e-14;1!DOID:10165;9.12e-14;1!DOID:1798;9.12e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.53e-14,1;DOID:10165,4.53e-14,1;DOID:1798,4.53e-14,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.43e-14;8!UBERON:0005795;9.12e-14;1!UBERON:0003135;9.27e-11;11!UBERON:0000922;7.64e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.01e-14,8;UBERON:0003135,7.22e-11,11;UBERON:0002323,9.48e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.534893840235659,0.57470412614962,0.314843125254717,0,0.767658796194425,0,0,0,0,0.232401601740905,0.995184627411951,0.293600439334847,1.10799081706375,0,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,1.21079900526674,0,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0,0.32145117339416,0.285012743741249,0,0,0,0,0,1.28019066769952,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.616804496998528,0.167186495390678,0.651844533267181,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0,1.24930726552346,0.236777252044017,0,0.604820229674197,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.263504357079378,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0.121973706129595,0.265059536642971,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.448340575974109,0.197030760201927,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0.460511024178389,0,0.107420244868274,0.290033387828457,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0.371606350251437,0.144269212976445,0.142283686696828,0.159426272728822,0.199579371432817,0,0.635020748171649,0.649243880549111,0,0.456469358066384,0.156679895773023,5.01268954180134,0.169291777801603,0.1605880751037,0.605399121573143,0,0,0,0,0.333698283423817,0,0,0,0,0.33307196799782,0,0,0,0.242721043499027,0.111443384277478,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0.844501632511974,0,0,0.251932747854276,0.102268682502155,0.123084805461069,0,0.539210106883961,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0.344743373241465,0,0.347249989866585,0,0,0,0,0,0,0.32681539055697,0.139423744278603,0,0,0.69169171316418,0.359030577639089,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0.569261198172555,0,0.421996129056054,0.326465616318295,0,0,0,0.0884575645033392,0.611030144933625,1.18608451472249,0.247127877893006,0.104421949505455,0,0,0,0.547364367646998,0.19566461893209,0.728341138602278,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0,0,0,1.19472429772959,1.42304773014896,0,0,0.0979923974143777,0.174118413160805,0.17472666824203,0,0.19351266257817,0.146178634172371,0.164230914106418,0.0969890164884194,0,0,0,0,0,0.195551382734803,0.320635281006135,0.213452994739353,0,0.288180834308212,0.458146384663663,0.686379991447858,0.432164393964449,0.124252535565433,0.235694034616795,0,0.209205692624666,0,0,0,0,0,0,0.525774708558629,0,0,0.717873024576814,0,0,0,0,0,1.16495949527454,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0,0,0.412618309791701,0.415440338029185,0.449947783103001,0,0,0,0,0.104909176269996,0.422401346077626,0,0,0,0,0.25426853765475,0,0,0,0,0.492555124496034,0,0.113312091520126,0,0,0,0.13223260174269,0.684347351537318,0,0,0.157204305099666,0,0.992332043623902,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0.124980407962107,0,0,0.470531639396343,0.936669811613763,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0.337884881306145,0,0,0,0,0.779441235357554,0,0.981392365535065,0,0.245772908753719,0,0.19998739585493,0.426766918776564,0.344429959321631,0,0,0,0,0.127894371303652,0.539124056983409,0,0.327628914576042,0.33946505990805,0.850299680406731,0.123935764259002,0,0,0.552032215008773,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.785181748008205,0.11796972334774,0,2.07946199070609,0,0,0.198916222116275,0.150420656698515,0,0,1.83334686136996,0.49131575253029,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0.464965701472501,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0.111855431797792,0.196300467230486,0,0,0,0,0.485710993059139,0.233939463462106,0.198950775161368,0,0.5647304101948,0.439762066981716,0.301925687133347,0.231522474323834,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0,0.399764623699716,0.178553938605658,0,0.160482733378337,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0.126698501011437,1.83579893535567,1.3360870263278,1.19463369395298,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0.217716747896961,0.684466602170562,0.134704106029175,0,0,0.244209805832924,0.213454691755431,0,0.359300808426348,0,0,1.22068853494722,0,0,0.320568492303233 | |||
|short_description=p@chr12:31457050..31457054,- | |||
}} |
Revision as of 22:25, 10 September 2013
Short description: | p@chr12:31457050..31457054, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:31457050..31457054, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.84e-17 | 7 |
germ cell | 9.84e-17 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.01e-14 | 8 |
male reproductive organ | 7.22e-11 | 11 |
body cavity | 9.48e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.53e-14 | 1 |
endocrine pancreas cancer | 4.53e-14 | 1 |
pancreatic endocrine carcinoma | 4.53e-14 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.