FFCP PHASE1:Hg19::chr12:56415246..56415286,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64375|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13179|TSSclassifier=S|UniProt=|association_with_transcript=116bp_to_ENST00000547668_5end|coexpression_cluster_id=C3298|description=CAGE_peak_2_at_IKZF4_5end|id=chr12:56415246..56415286,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000624;5.02e-08;6!CL:0000898;7.35e-07;3|ontology_enrichment_celltype_v019_2=CL:0000624,4.56e-08,6;CL:0000763,1.03e-07,108;CL:0000049,1.03e-07,108;CL:0000988,2.12e-07,177;CL:0000898,6.22e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1036;4.72e-09;8!DOID:8692;6.49e-08;31|ontology_enrichment_disease_v019_2=DOID:1036,4.45e-09,8;DOID:8692,3.03e-08,31;DOID:1240,4.31e-07,39|ontology_enrichment_uberon=UBERON:0007023!4.83e-19!115;UBERON:0001049!3.95e-12!57;UBERON:0005068!3.95e-12!57;UBERON:0006241!3.95e-12!57;UBERON:0007135!3.95e-12!57;UBERON:0003075!4.54e-12!86;UBERON:0007284!4.54e-12!86;UBERON:0002346!9.40e-11!90;UBERON:0002616!1.48e-09!59;UBERON:0005743!5.86e-09!86;UBERON:0001017!7.84e-09!82;UBERON:0000073!9.90e-09!94;UBERON:0001016!9.90e-09!94;UBERON:0002020!6.99e-08!34;UBERON:0003528!6.99e-08!34;UBERON:0001869!8.74e-08!32;UBERON:0003076!4.03e-07!15;UBERON:0003057!4.03e-07!15;UBERON:0003056!4.26e-07!61;UBERON:0003080!4.53e-07!42;UBERON:0001893!6.70e-07!34|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,1.84681587115182,0.612002073732759,0.940364164434263,0.572471974262113,0.136874425072884,0.251085279189606,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0,0,0,21.8646218164834,24.0791064137355,13.4794871036494,0,0,0,0,0,0,0,0,0,35.6239404201653,25.7308118331905,23.8685860298309,0,0,0.622822248995575,12.0599359323237,15.1230046341858,9.77349801173025,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,1.57204305099666,0.411202997999018,30.5951286564941,2.60737813306872,2.36723902867367,1.94826728407911,12.3665607142543,3.53527088969805,2.21533894583621,5.95768500283034,21.1350677547364,18.0782493108231,9.20852265780586,6.63240042686036,12.1717296008722,0.296573126324121,1.33770414044857,0,9.06474741580529,2.68254345521345,0.68725489096526,1.26509846009751,0.637130828648193,0.651083453856419,0,0.602300476311091,0.255973222308837,0,0.236777252044017,0,0,0,0.144824403882799,2.43806866313962,0,0.12786256184353,0,0,0.434539556882471,0,0.486634870302636,0.472674085820339,0.443458794925128,0.790513071238134,0.654895377488563,0,0,2.92092654289215,4.52737316978095,2.92507513141503,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0,0,0.560677600142307,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.285955987316295,1.62786481617433,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0.215627574859517,0.128343036279748,0.508189248444927,1.30139853857622,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,0.49076596687656,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0.82707210449155,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.34444334449382,0,0.131124414959424,0.451199612907412,0.616122696835318,0,1.46139224653261,0.422206515571503,0,0,0,0,0.270946437543853,1.00337954770971,0,1.66215201785745,1.11937377361089,3.28889814968902,2.3529190592241,0,0,0.650756789328606,0.721287081534056,0,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0.751941714077915,0.290033387828457,0.0852266274161009,0.445160178233687,0,0,0,0.10115778085555,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.823611089208164,0.706874414074119,0,0,0,1.46290121726877,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0.578775534266688,1.31178950409327,0,0,0.281695602532241,0.573645408816206,0.196498082026242,0,0,0.422215270595328,0.329294892959902,0.75894634753143,0.699869440489966,0,0,0,0.470719003883896,0,0,0,0,1.52234282769651,0,2.27858874869665,0.238231775457789,1.23408681925858,0,0.540031437238115,0,0,0,0,0,0,0,0,0,1.34053759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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64375 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13179 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=116bp_to_ENST00000547668_5end | |||
|coexpression_cluster_id=C3298 | |||
|description=CAGE_peak_2_at_IKZF4_5end | |||
|id=chr12:56415246..56415286,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000624;5.02e-08;6!CL:0000898;7.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.56e-08,6;CL:0000763,1.03e-07,108;CL:0000049,1.03e-07,108;CL:0000988,2.12e-07,177;CL:0000898,6.22e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;4.72e-09;8!DOID:8692;6.49e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.45e-09,8;DOID:8692,3.03e-08,31;DOID:1240,4.31e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.83e-19!115;UBERON:0001049!3.95e-12!57;UBERON:0005068!3.95e-12!57;UBERON:0006241!3.95e-12!57;UBERON:0007135!3.95e-12!57;UBERON:0003075!4.54e-12!86;UBERON:0007284!4.54e-12!86;UBERON:0002346!9.40e-11!90;UBERON:0002616!1.48e-09!59;UBERON:0005743!5.86e-09!86;UBERON:0001017!7.84e-09!82;UBERON:0000073!9.90e-09!94;UBERON:0001016!9.90e-09!94;UBERON:0002020!6.99e-08!34;UBERON:0003528!6.99e-08!34;UBERON:0001869!8.74e-08!32;UBERON:0003076!4.03e-07!15;UBERON:0003057!4.03e-07!15;UBERON:0003056!4.26e-07!61;UBERON:0003080!4.53e-07!42;UBERON:0001893!6.70e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@IKZF4 | |||
}} |
Revision as of 23:30, 10 September 2013
Short description: | p2@IKZF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_IKZF4_5end |
Coexpression cluster: | C3298_CD4_CD14_cord_chronic_adult_mycosis_acute |
Association with transcript: | 116bp_to_ENST00000547668_5end |
EntrezGene: | IKZF4 |
HGNC: | 13179 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.56e-08 | 6 |
myeloid cell | 1.03e-07 | 108 |
common myeloid progenitor | 1.03e-07 | 108 |
hematopoietic cell | 2.12e-07 | 177 |
naive T cell | 6.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.45e-09 | 8 |
myeloid leukemia | 3.03e-08 | 31 |
leukemia | 4.31e-07 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.