FFCP PHASE1:Hg19::chr12:57554837..57554851,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1365|description=CAGE_peak_at_chr12:57554837..57554851,+|id=chr12:57554837..57554851,+|ontology_enrichment_celltype=CL:0000055!3.65e-16!180;CL:0000057!2.68e-14!75;CL:0000048!1.98e-10!430;CL:0000723!2.15e-09!436;CL:0002620!2.18e-09!23;CL:0000034!4.81e-09!444;CL:0002320!1.10e-08!365;CL:0000134!5.06e-07!358;CL:0002334!8.09e-07!12|ontology_enrichment_celltype_v019=CL:0000499;1.03e-15;28!CL:0002334;5.23e-10;12!CL:0000327;4.09e-09;15!CL:0002620;8.37e-09;23!CL:0000153;1.46e-08;9!CL:0000447;1.46e-08;9!CL:0000138;6.53e-07;6|ontology_enrichment_celltype_v019_2=CL:0000499,1.52e-15,28;CL:0000057,7.00e-15,76;CL:0002320,1.29e-14,361;CL:0000048,1.05e-11,427;CL:0000134,1.08e-11,354;CL:0000723,3.37e-11,433;CL:0000034,1.51e-10,441;CL:0002334,6.14e-10,12;CL:0000219,1.04e-09,386;CL:0000327,5.39e-09,15;CL:0002620,7.36e-09,23;CL:0000153,2.21e-08,9;CL:0000447,2.21e-08,9;CL:0000136,8.96e-07,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;3.55e-08;5!DOID:450;3.55e-08;5!DOID:66;3.55e-08;5!DOID:423;3.55e-08;5!DOID:0080000;3.55e-08;5!DOID:11722;3.55e-08;5|ontology_enrichment_disease_v019_2=DOID:17,4.14e-08,5;DOID:450,4.14e-08,5;DOID:66,4.14e-08,5;DOID:423,4.14e-08,5;DOID:0080000,4.14e-08,5;DOID:11722,4.14e-08,5|ontology_enrichment_uberon=UBERON:0000468!2.08e-09!659;UBERON:0002384!1.66e-08!375;UBERON:0002204!4.61e-07!167;UBERON:0000062!6.57e-07!511|ontology_enrichment_uberon_v019=UBERON:0004457;5.35e-11;9!UBERON:0000042;5.35e-11;9!UBERON:0003688;1.33e-09;6!UBERON:0002358;1.33e-09;6!UBERON:0003684;1.33e-09;6!UBERON:0001178;1.33e-09;6!UBERON:0002384;2.80e-07;198!UBERON:0004905;7.72e-07;8!UBERON:0000982;7.72e-07;8!UBERON:0004770;7.72e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.42e-15,371;UBERON:0003688,1.27e-09,6;UBERON:0002358,1.27e-09,6;UBERON:0003684,1.27e-09,6;UBERON:0001178,1.27e-09,6;UBERON:0004457,8.20e-08,12;UBERON:0000042,8.20e-08,12;UBERON:0004905,3.51e-07,8;UBERON:0000982,3.51e-07,8;UBERON:0004770,3.51e-07,8|phase1_expression=0.726713517082227,6.20891519283851,1.9733616573436,1.0007329835313,2.68176656656373,3.48935409640147,0,0.631719873426831,1.82829939739887,0,0,0.436882744260345,0.263766978228454,0.74259811776028,1.65698687863958,3.36162573225888,1.20538905604795,0,0.487932798790507,0.492484232307152,0.408001382488506,1.56727360739044,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,2.00544447470142,0.651032612147555,0.671746422719773,0.647787332037959,0.515151135268373,2.03557534291391,0,0.242584061187816,0.929716147622738,1.6446715520873,0.619412741790207,0.863077176966451,0,0.709446689665756,0,0.645484683583826,0,1.50593871634084,0.818718450173537,0,0.612167784741805,0,0,2.30895910130701,0.398927315243264,0,1.16083695451434,0,0.622822248995575,1.7587406567972,1.0429658368404,0.65156653411535,0.605399502633369,0,0,0,0.425208599930087,0.209658645508376,1.12328631146495,0.150176892841506,0.16072558669708,0.855038231223746,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,1.0843174571537,1.50401373190767,2.17269778441236,3.1811437882044,6.8128881842369,0.189069634328136,0.443458794925128,0.175669571386252,0.196468613246569,0,0,0.324547393654683,0.522389211897802,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,3.47880366186723,1.2663051166458,0.397227542439656,7.17091551872034,0.354668382198357,0,0,0.49333509683432,0,0,0,1.36221684880438,0.576175924479999,0.234321431833797,0.936480230490962,0,0.896692083310806,0.117434498643765,0.647491777472526,0.280901613404497,0.204154171254893,1.22834317311768,0.619954687054593,3.56400857184616,2.47266929278557,0,0.718618141816238,0.168336113954066,0.625592599359821,0,0.438977620880838,0.612975591598039,0.901428353439581,0,2.51145489964407,2.13557388818567,1.27159140695737,3.90118424909723,1.33968288009971,2.31876486041066,1.48893485065272,1.35021065793013,1.46155507741798,2.01947019395292,1.47279837827679,2.90962902273861,4.61512470271599,0.906768884048762,0.847802961552438,0.193260853163297,0,0,0.365921118388786,0.265059536642971,0.348581828608555,0.207322110030741,0,0.36497735907583,0,3.21620469096443,0,0.928735856063958,0.721879481669586,0.236613600079688,0.168584690078102,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,1.2347220339942,2.94017422771084,0,1.96565443335525,0.590789906681404,0,0.368965315629341,0.171567810298526,0,0,0,0,0.651616610620649,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0.738651018262192,0.468008530278475,0.445893486866185,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0.11213108434536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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1365 | |||
|description=CAGE_peak_at_chr12:57554837..57554851,+ | |||
|id=chr12:57554837..57554851,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.65e-16!180;CL:0000057!2.68e-14!75;CL:0000048!1.98e-10!430;CL:0000723!2.15e-09!436;CL:0002620!2.18e-09!23;CL:0000034!4.81e-09!444;CL:0002320!1.10e-08!365;CL:0000134!5.06e-07!358;CL:0002334!8.09e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000499;1.03e-15;28!CL:0002334;5.23e-10;12!CL:0000327;4.09e-09;15!CL:0002620;8.37e-09;23!CL:0000153;1.46e-08;9!CL:0000447;1.46e-08;9!CL:0000138;6.53e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,1.52e-15,28;CL:0000057,7.00e-15,76;CL:0002320,1.29e-14,361;CL:0000048,1.05e-11,427;CL:0000134,1.08e-11,354;CL:0000723,3.37e-11,433;CL:0000034,1.51e-10,441;CL:0002334,6.14e-10,12;CL:0000219,1.04e-09,386;CL:0000327,5.39e-09,15;CL:0002620,7.36e-09,23;CL:0000153,2.21e-08,9;CL:0000447,2.21e-08,9;CL:0000136,8.96e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.55e-08;5!DOID:450;3.55e-08;5!DOID:66;3.55e-08;5!DOID:423;3.55e-08;5!DOID:0080000;3.55e-08;5!DOID:11722;3.55e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.14e-08,5;DOID:450,4.14e-08,5;DOID:66,4.14e-08,5;DOID:423,4.14e-08,5;DOID:0080000,4.14e-08,5;DOID:11722,4.14e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000468!2.08e-09!659;UBERON:0002384!1.66e-08!375;UBERON:0002204!4.61e-07!167;UBERON:0000062!6.57e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.35e-11;9!UBERON:0000042;5.35e-11;9!UBERON:0003688;1.33e-09;6!UBERON:0002358;1.33e-09;6!UBERON:0003684;1.33e-09;6!UBERON:0001178;1.33e-09;6!UBERON:0002384;2.80e-07;198!UBERON:0004905;7.72e-07;8!UBERON:0000982;7.72e-07;8!UBERON:0004770;7.72e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.42e-15,371;UBERON:0003688,1.27e-09,6;UBERON:0002358,1.27e-09,6;UBERON:0003684,1.27e-09,6;UBERON:0001178,1.27e-09,6;UBERON:0004457,8.20e-08,12;UBERON:0000042,8.20e-08,12;UBERON:0004905,3.51e-07,8;UBERON:0000982,3.51e-07,8;UBERON:0004770,3.51e-07,8 | |||
|phase1_expression=0.726713517082227,6.20891519283851,1.9733616573436,1.0007329835313,2.68176656656373,3.48935409640147,0,0.631719873426831,1.82829939739887,0,0,0.436882744260345,0.263766978228454,0.74259811776028,1.65698687863958,3.36162573225888,1.20538905604795,0,0.487932798790507,0.492484232307152,0.408001382488506,1.56727360739044,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,2.00544447470142,0.651032612147555,0.671746422719773,0.647787332037959,0.515151135268373,2.03557534291391,0,0.242584061187816,0.929716147622738,1.6446715520873,0.619412741790207,0.863077176966451,0,0.709446689665756,0,0.645484683583826,0,1.50593871634084,0.818718450173537,0,0.612167784741805,0,0,2.30895910130701,0.398927315243264,0,1.16083695451434,0,0.622822248995575,1.7587406567972,1.0429658368404,0.65156653411535,0.605399502633369,0,0,0,0.425208599930087,0.209658645508376,1.12328631146495,0.150176892841506,0.16072558669708,0.855038231223746,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,1.0843174571537,1.50401373190767,2.17269778441236,3.1811437882044,6.8128881842369,0.189069634328136,0.443458794925128,0.175669571386252,0.196468613246569,0,0,0.324547393654683,0.522389211897802,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,3.47880366186723,1.2663051166458,0.397227542439656,7.17091551872034,0.354668382198357,0,0,0.49333509683432,0,0,0,1.36221684880438,0.576175924479999,0.234321431833797,0.936480230490962,0,0.896692083310806,0.117434498643765,0.647491777472526,0.280901613404497,0.204154171254893,1.22834317311768,0.619954687054593,3.56400857184616,2.47266929278557,0,0.718618141816238,0.168336113954066,0.625592599359821,0,0.438977620880838,0.612975591598039,0.901428353439581,0,2.51145489964407,2.13557388818567,1.27159140695737,3.90118424909723,1.33968288009971,2.31876486041066,1.48893485065272,1.35021065793013,1.46155507741798,2.01947019395292,1.47279837827679,2.90962902273861,4.61512470271599,0.906768884048762,0.847802961552438,0.193260853163297,0,0,0.365921118388786,0.265059536642971,0.348581828608555,0.207322110030741,0,0.36497735907583,0,3.21620469096443,0,0.928735856063958,0.721879481669586,0.236613600079688,0.168584690078102,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,1.2347220339942,2.94017422771084,0,1.96565443335525,0.590789906681404,0,0.368965315629341,0.171567810298526,0,0,0,0,0.651616610620649,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0.738651018262192,0.468008530278475,0.445893486866185,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.387815147273333,7.15312891703765,0,1.32969058292435,2.08014873822732,0.257207374262142,1.41849132023278,0.532844358032199,0.857867961948885,3.7983512377401,0.823240336780769,0.325736184293735,0.710783897485092,0.791951872933429,0.602878754119172,0,0.499864955910285,2.43247561282381,0.502257091432126,4.21667878966063,1.91699884393266,0,0,1.15825045334063,3.28762116080613,0.537182889719687,0,0,0,0.256686072559497,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,1.59498939234882,4.00136416847742,1.89885516589815,1.66376689224646,5.88815663030634,2.83864347061082,1.28855556491985,0.300946099727719,2.27407504055985,0,0.664225598535437,0.368738337083406,1.91143951829782,1.56640925970192,1.71571711905428,0.413536052245775,0,0.426910231213777,0,1.66435439510497,1.5119514666484,2.23297027036899,2.14846762603287,4.77122160536225,2.69092213436972,2.04682899626681,3.21707842287215,1.48418066444991,1.23367755042124,0.532685175939381,0.246381468041427,2.59627214591811,0.348631135379878,0,0.40101294060657,0,1.14814448164607,1.0925470080403,2.22911505431021,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0,0,0,0,0,0,8.03419649220798,0.386682873168488,0.308097234229289,0.767518373630648,0.413509717453592,0.537101224341368,1.16013355131383,0.255679882248303,0.534192213880424,0.165284915360978,0.192190067365106,0.255225424989168,0.10115778085555,0,2.51849877464512,0.6970372701606,0.616067160352178,0.532306030317022,0,0,0,0.744316738719335,0.316379424718726,0.762520775695299,0.511795582622668,0.855877976067841,0,0,0.359744915166629,1.92175920815238,0.353437207037059,0,3.17020642346017,0.421258456238981,0.48763373908959,0.731140468893853,0,0.136499911407986,2.82810863907426,1.13008116620243,0,1.32687795048244,0,0.578775534266688,0.655894752046633,0,0.6196469961995,0,0.430234056612155,0.392996164052485,0.35667105148125,0.709522128141196,2.32218398827431,3.29294892959902,0,0.349934720244983,0,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8790490756313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| |||
|short_description=p@chr12:57554837..57554851,+ | |||
}} |
Revision as of 23:37, 10 September 2013
Short description: | p@chr12:57554837..57554851, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:57554837..57554851, + |
Coexpression cluster: | C1365_Fibroblast_Adipocyte_Preadipocyte_Smooth_Chondrocyte_Mesenchymal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 1.52e-15 | 28 |
fibroblast | 7.00e-15 | 76 |
connective tissue cell | 1.29e-14 | 361 |
multi fate stem cell | 1.05e-11 | 427 |
mesenchymal cell | 1.08e-11 | 354 |
somatic stem cell | 3.37e-11 | 433 |
stem cell | 1.51e-10 | 441 |
preadipocyte | 6.14e-10 | 12 |
motile cell | 1.04e-09 | 386 |
extracellular matrix secreting cell | 5.39e-09 | 15 |
skin fibroblast | 7.36e-09 | 23 |
GAG secreting cell | 2.21e-08 | 9 |
carbohydrate secreting cell | 2.21e-08 | 9 |
fat cell | 8.96e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.42e-15 | 371 |
omentum | 1.27e-09 | 6 |
peritoneum | 1.27e-09 | 6 |
abdominal cavity | 1.27e-09 | 6 |
visceral peritoneum | 1.27e-09 | 6 |
cavity lining | 8.20e-08 | 12 |
serous membrane | 8.20e-08 | 12 |
articulation | 3.51e-07 | 8 |
skeletal joint | 3.51e-07 | 8 |
articular system | 3.51e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.14e-08 | 5 |
myotonic disease | 4.14e-08 | 5 |
muscle tissue disease | 4.14e-08 | 5 |
myopathy | 4.14e-08 | 5 |
muscular disease | 4.14e-08 | 5 |
myotonic dystrophy | 4.14e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.