FFCP PHASE1:Hg19::chr12:66036219..66036262,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-67bp_to_ENST00000544557_5end|coexpression_cluster_id=C341|description=CAGE_peak_1_at_ENST00000544557_5end|id=chr12:66036219..66036262,-|ontology_enrichment_celltype=CL:0000055!2.47e-19!180;CL:0000680!3.65e-16!57;CL:0000056!3.65e-16!57;CL:0000355!3.65e-16!57;CL:0000220!7.31e-16!246;CL:0002321!1.45e-15!248;CL:0002371!6.08e-15!591;CL:0000187!1.85e-13!54;CL:0000144!2.35e-13!625;CL:0000183!8.71e-13!59;CL:0000393!2.05e-12!60;CL:0000211!2.05e-12!60;CL:0000548!7.74e-11!679;CL:0000004!7.74e-11!679;CL:0000255!7.74e-11!679;CL:0000012!1.24e-10!682;CL:0002551!2.56e-10!6;CL:0000192!3.48e-10!42;CL:0000514!3.48e-10!42;CL:0000048!4.29e-10!430;CL:0000723!4.79e-10!436;CL:0000222!1.87e-09!119;CL:0000034!2.07e-09!444;CL:0002620!4.03e-08!23;CL:0000003!4.75e-08!722|ontology_enrichment_celltype_v019=CL:0002551;1.10e-16;6!CL:0000188;2.21e-15;9!CL:0000680;2.49e-13;7!CL:0002567;9.88e-13;3!CL:0000594;3.30e-12;3!CL:0002559;5.42e-12;5!CL:0000148;1.39e-09;10!CL:1000306;3.32e-09;4!CL:0002547;3.32e-09;4!CL:0002561;2.23e-08;2!CL:0000187;2.31e-08;55!CL:0002595;5.85e-07;5!CL:0000147;9.48e-07;14!CL:0000393;9.76e-07;61!CL:0000211;9.76e-07;61|ontology_enrichment_celltype_v019_2=CL:0002551,9.08e-17,6;CL:0000188,2.13e-15,9;CL:0000680,1.15e-14,58;CL:0000056,1.15e-14,58;CL:0000355,1.15e-14,58;CL:0002567,1.05e-12,3;CL:0000594,3.12e-12,3;CL:0002559,4.75e-12,5;CL:0000187,5.40e-12,55;CL:0000393,1.74e-10,61;CL:0000211,1.74e-10,61;CL:0000148,1.43e-09,10;CL:0000541,1.43e-09,10;CL:1000306,3.47e-09,4;CL:0002547,3.47e-09,4;CL:0002321,1.23e-08,250;CL:0002561,2.23e-08,2;CL:0000333,4.58e-07,41;CL:0002595,5.09e-07,5;CL:0000147,9.67e-07,14|ontology_enrichment_development_v019=CL:0000355;1.75e-08;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004290!5.77e-22!70;UBERON:0000486!4.33e-19!82;UBERON:0000914!1.33e-18!83;UBERON:0002329!1.33e-18!83;UBERON:0003077!1.33e-18!83;UBERON:0003059!1.33e-18!83;UBERON:0007282!1.33e-18!83;UBERON:0009618!1.33e-18!83;UBERON:0007285!1.33e-18!83;UBERON:0001134!1.71e-14!61;UBERON:0002036!1.71e-14!61;UBERON:0003082!1.71e-14!61;UBERON:0002385!9.62e-14!63;UBERON:0001015!9.62e-14!63;UBERON:0000383!9.62e-14!63;UBERON:0002067!2.35e-11!9;UBERON:0004016!2.35e-11!9;UBERON:0010083!2.35e-11!9;UBERON:0005256!2.18e-09!143;UBERON:0002199!2.49e-09!45;UBERON:0002416!2.49e-09!45;UBERON:0004573!5.22e-09!33;UBERON:0004571!5.22e-09!33;UBERON:0000055!6.89e-09!69;UBERON:0002097!1.00e-07!40;UBERON:0000490!1.29e-07!138;UBERON:0001637!4.11e-07!42;UBERON:0003509!4.11e-07!42;UBERON:0004572!4.11e-07!42;UBERON:0002049!7.25e-07!79;UBERON:0007798!7.25e-07!79;UBERON:0001981!7.57e-07!60;UBERON:0007500!7.57e-07!60;UBERON:0004537!7.57e-07!60;UBERON:0006965!7.57e-07!60|ontology_enrichment_uberon_v019=UBERON:0002067;1.76e-20;9!UBERON:0001134;2.66e-14;16!UBERON:0002036;2.66e-14;16!UBERON:0002073;5.42e-12;5!UBERON:0002385;2.33e-10;31!UBERON:0001015;2.33e-10;31!UBERON:0000383;2.33e-10;31!UBERON:0004797;3.32e-09;4!UBERON:0000415;3.32e-09;4!UBERON:0007240;3.32e-09;4!UBERON:0005742;3.32e-09;4!UBERON:0005734;3.32e-09;4!UBERON:0004664;3.32e-09;4!UBERON:0004663;3.32e-09;4!UBERON:0005933;2.23e-08;2!UBERON:0005942;2.23e-08;2!UBERON:0005932;2.23e-08;2!UBERON:0004573;2.33e-07;33!UBERON:0004571;2.33e-07;33!UBERON:0003834;5.85e-07;5!UBERON:0001533;5.85e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002329,6.59e-25,71;UBERON:0003059,6.59e-25,71;UBERON:0007282,6.59e-25,71;UBERON:0004290,6.59e-25,71;UBERON:0009618,6.59e-25,71;UBERON:0003077,1.77e-24,72;UBERON:0007285,1.77e-24,72;UBERON:0007503,3.62e-24,78;UBERON:0007524,4.63e-24,73;UBERON:0002067,1.29e-20,9;UBERON:0004016,1.29e-20,9;UBERON:0010083,1.29e-20,9;UBERON:0000486,1.91e-20,83;UBERON:0001134,1.83e-13,62;UBERON:0002036,1.83e-13,62;UBERON:0003082,1.83e-13,62;UBERON:0005256,2.92e-13,122;UBERON:0002385,6.39e-13,64;UBERON:0001015,6.39e-13,64;UBERON:0000383,6.39e-13,64;UBERON:0002073,4.75e-12,5;UBERON:0005086,4.75e-12,5;UBERON:0000490,6.30e-10,148;UBERON:0000415,3.47e-09,4;UBERON:0007240,3.47e-09,4;UBERON:0005742,3.47e-09,4;UBERON:0005734,3.47e-09,4;UBERON:0004664,3.47e-09,4;UBERON:0004663,3.47e-09,4;UBERON:0003104,9.65e-09,160;UBERON:0009142,9.65e-09,160;UBERON:0005933,2.23e-08,2;UBERON:0005942,2.23e-08,2;UBERON:0005932,2.23e-08,2;UBERON:0002199,5.25e-08,46;UBERON:0002416,5.25e-08,46;UBERON:0002097,1.38e-07,41;UBERON:0004573,1.54e-07,33;UBERON:0004571,1.54e-07,33;UBERON:0002100,1.97e-07,199;UBERON:0003834,5.09e-07,5;UBERON:0001533,5.09e-07,5;UBERON:0001637,6.10e-07,42;UBERON:0003509,6.10e-07,42;UBERON:0004572,6.10e-07,42|phase1_expression=0,0,0,0,0,0,0,4.42203911398782,0,1.47440361900905,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-67bp_to_ENST00000544557_5end | |||
|coexpression_cluster_id=C341 | |||
|description=CAGE_peak_1_at_ENST00000544557_5end | |||
|id=chr12:66036219..66036262,- | |||
|ontology_enrichment_celltype=CL:0000055!2.47e-19!180;CL:0000680!3.65e-16!57;CL:0000056!3.65e-16!57;CL:0000355!3.65e-16!57;CL:0000220!7.31e-16!246;CL:0002321!1.45e-15!248;CL:0002371!6.08e-15!591;CL:0000187!1.85e-13!54;CL:0000144!2.35e-13!625;CL:0000183!8.71e-13!59;CL:0000393!2.05e-12!60;CL:0000211!2.05e-12!60;CL:0000548!7.74e-11!679;CL:0000004!7.74e-11!679;CL:0000255!7.74e-11!679;CL:0000012!1.24e-10!682;CL:0002551!2.56e-10!6;CL:0000192!3.48e-10!42;CL:0000514!3.48e-10!42;CL:0000048!4.29e-10!430;CL:0000723!4.79e-10!436;CL:0000222!1.87e-09!119;CL:0000034!2.07e-09!444;CL:0002620!4.03e-08!23;CL:0000003!4.75e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0002551;1.10e-16;6!CL:0000188;2.21e-15;9!CL:0000680;2.49e-13;7!CL:0002567;9.88e-13;3!CL:0000594;3.30e-12;3!CL:0002559;5.42e-12;5!CL:0000148;1.39e-09;10!CL:1000306;3.32e-09;4!CL:0002547;3.32e-09;4!CL:0002561;2.23e-08;2!CL:0000187;2.31e-08;55!CL:0002595;5.85e-07;5!CL:0000147;9.48e-07;14!CL:0000393;9.76e-07;61!CL:0000211;9.76e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,9.08e-17,6;CL:0000188,2.13e-15,9;CL:0000680,1.15e-14,58;CL:0000056,1.15e-14,58;CL:0000355,1.15e-14,58;CL:0002567,1.05e-12,3;CL:0000594,3.12e-12,3;CL:0002559,4.75e-12,5;CL:0000187,5.40e-12,55;CL:0000393,1.74e-10,61;CL:0000211,1.74e-10,61;CL:0000148,1.43e-09,10;CL:0000541,1.43e-09,10;CL:1000306,3.47e-09,4;CL:0002547,3.47e-09,4;CL:0002321,1.23e-08,250;CL:0002561,2.23e-08,2;CL:0000333,4.58e-07,41;CL:0002595,5.09e-07,5;CL:0000147,9.67e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000355;1.75e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!5.77e-22!70;UBERON:0000486!4.33e-19!82;UBERON:0000914!1.33e-18!83;UBERON:0002329!1.33e-18!83;UBERON:0003077!1.33e-18!83;UBERON:0003059!1.33e-18!83;UBERON:0007282!1.33e-18!83;UBERON:0009618!1.33e-18!83;UBERON:0007285!1.33e-18!83;UBERON:0001134!1.71e-14!61;UBERON:0002036!1.71e-14!61;UBERON:0003082!1.71e-14!61;UBERON:0002385!9.62e-14!63;UBERON:0001015!9.62e-14!63;UBERON:0000383!9.62e-14!63;UBERON:0002067!2.35e-11!9;UBERON:0004016!2.35e-11!9;UBERON:0010083!2.35e-11!9;UBERON:0005256!2.18e-09!143;UBERON:0002199!2.49e-09!45;UBERON:0002416!2.49e-09!45;UBERON:0004573!5.22e-09!33;UBERON:0004571!5.22e-09!33;UBERON:0000055!6.89e-09!69;UBERON:0002097!1.00e-07!40;UBERON:0000490!1.29e-07!138;UBERON:0001637!4.11e-07!42;UBERON:0003509!4.11e-07!42;UBERON:0004572!4.11e-07!42;UBERON:0002049!7.25e-07!79;UBERON:0007798!7.25e-07!79;UBERON:0001981!7.57e-07!60;UBERON:0007500!7.57e-07!60;UBERON:0004537!7.57e-07!60;UBERON:0006965!7.57e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.76e-20;9!UBERON:0001134;2.66e-14;16!UBERON:0002036;2.66e-14;16!UBERON:0002073;5.42e-12;5!UBERON:0002385;2.33e-10;31!UBERON:0001015;2.33e-10;31!UBERON:0000383;2.33e-10;31!UBERON:0004797;3.32e-09;4!UBERON:0000415;3.32e-09;4!UBERON:0007240;3.32e-09;4!UBERON:0005742;3.32e-09;4!UBERON:0005734;3.32e-09;4!UBERON:0004664;3.32e-09;4!UBERON:0004663;3.32e-09;4!UBERON:0005933;2.23e-08;2!UBERON:0005942;2.23e-08;2!UBERON:0005932;2.23e-08;2!UBERON:0004573;2.33e-07;33!UBERON:0004571;2.33e-07;33!UBERON:0003834;5.85e-07;5!UBERON:0001533;5.85e-07;5 | |||
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|phase1_expression=0,0,0,0,0,0,0,4.42203911398782,0,1.47440361900905,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,4.36950296683622,2.58152958673932,3.90135220418193,0,0,0,0,0,0,0,0,0,1.87296046098192,0.570471821544449,5.23070381931304,70.8130026821902,22.9859581002747,22.3316782656575,0,0,0,0,0,0.910161361938026,2.87447256726495,0,0,0,0,0,0,0,0.179389635688862,0,0.423863802319124,0,0.103052529238439,0,0,0.843881661206331,0,0,0,0,0.710019185033229,0.10075209822764,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,2.76269842704961,3.25057549622385,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0.231860809950154,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,2.60341366597893,14.8975485967728,7.03304683260282,5.13217338068116,2.67351481028641,0,0,0.112131084345361,0,0.07333828582095,0,10.7296933755565,41.419834875244,0,0,0.514414748524284,0,0.532844358032199,0,0,0,44.9515934325354,0,0,0,0,0.199945982364114,0,0,0,0,0,0,2.46128221334885,1.43833425785268,0.716243852959582,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.710246901252508,1.39616165223476,0.519254429183621,1.39452454151951,0,0.601519410909855,0.184161977871793,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7103269232034,11.6662792791858,10.4755795088243,3.33002759091648,2.61030049045611,7.67039646744908,0,0,0.192190067365106,0.893288987462089,0,0.464845549297286,1.25924938732256,0,0,0.532306030317022,1.73986598415015,0,0.143124886741991,0,0,0,0,0,0,12.5591782431877,0.539617372749944,0.54907405947211,0.589062011728432,0.606547444719948,0,0.842516912477962,0,1.70599442741899,0,0.272999822815972,0,2.26016233240486,0,1.99031692572366,1.31535265576129,1.15755106853338,0.655894752046633,0,0,0,0,0,0,7.09522128141196,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0.569261198172555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,4.55375273647668,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,15.6984543245362,0,0,0,0,0,0,0,0,0,164.758862159764,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.8001682597032,0,0,0,0,0,0,0,2.93928624098468,0,0.410462603746695,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.597019211547496,0.233713309847224,0,0.378806010550178,0.251567901752575,0.889811221596536,0.228840068396924,3.02461847526478,0.621748802331122,0.295710299979268,0,0.449803112163605,0.155262956876259,0.414706207840855,0,0.521745061811734,0,0.380805212168795,0.406870733204662,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,31.2543515208184,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5199040526007,9.20304771398903,0,0,11.1674298839155,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000544557 | |||
}} |
Revision as of 23:58, 10 September 2013
Short description: | p1@ENST00000544557 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000544557_5end |
Coexpression cluster: | C341_giant_large_Fibroblast_Mesenchymal_Alveolar_Mesothelial_mesothelioma |
Association with transcript: | -67bp_to_ENST00000544557_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 9.08e-17 | 6 |
cell of skeletal muscle | 2.13e-15 | 9 |
muscle precursor cell | 1.15e-14 | 58 |
myoblast | 1.15e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.15e-14 | 58 |
light melanocyte | 1.05e-12 | 3 |
skeletal muscle satellite cell | 3.12e-12 | 3 |
hair follicle cell | 4.75e-12 | 5 |
muscle cell | 5.40e-12 | 55 |
electrically responsive cell | 1.74e-10 | 61 |
electrically active cell | 1.74e-10 | 61 |
melanocyte | 1.43e-09 | 10 |
melanoblast | 1.43e-09 | 10 |
fibroblast of tunica adventitia of artery | 3.47e-09 | 4 |
fibroblast of the aortic adventitia | 3.47e-09 | 4 |
embryonic cell | 1.23e-08 | 250 |
outer root sheath cell | 2.23e-08 | 2 |
migratory neural crest cell | 4.58e-07 | 41 |
smooth muscle cell of the subclavian artery | 5.09e-07 | 5 |
pigment cell | 9.67e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.