FFCP PHASE1:Hg19::chr12:76461249..76461260,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4673|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7637|TSSclassifier=W|UniProt=|association_with_transcript=-7bp_to_ENST00000552147_5end|description=CAGE_peak_12_at_NAP1L1_5end|id=chr12:76461249..76461260,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000785;2.62e-12;1!CL:0000819;2.62e-12;1!CL:0000235;4.65e-08;6|ontology_enrichment_celltype_v019_2=CL:0000819,2.63e-12,1;CL:0000235,4.82e-08,6;CL:0000785,8.93e-07,2;CL:0000955,8.93e-07,2;CL:0000818,8.93e-07,2;CL:0000954,8.93e-07,2;CL:0000816,8.93e-07,2|ontology_enrichment_development_v019=CL:0000954;8.92e-07;2|ontology_enrichment_disease=DOID:162!1.84e-12!235;DOID:14566!2.86e-12!239;DOID:0050687!3.96e-07!143|ontology_enrichment_disease_v019=DOID:0060073;2.62e-12;1!DOID:8675;2.62e-12;1|ontology_enrichment_disease_v019_2=DOID:0060073,2.63e-12,1;DOID:8675,2.63e-12,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0,0.286235987131057,0.273748850145768,0.125542639594803,0.152826811495903,0.0821005894499457,0.236132343941038,0,0.767658796194425,0,0,0.30120591877825,0,0.387336002901508,0,0,0,0.200544447470142,0.868043482863407,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0.822335776043652,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.632924774881769,0,0.212604299965044,0,0.22465726229299,0,0,0,0.59675003159727,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0.382273228125229,0,0.560508562981536,0,0.393419540227666,1.57204305099666,0.411202997999018,0.167186495390678,0,0.473447805734733,1.94826728407911,0,0,0,0,0,0.130059347559878,0.493313713811028,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0.427114777637135,0.211931901159562,0,0,0,0.37223371266318,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0.487894824518382,0.132529768321485,0.580969714347592,0.310983165046111,0.756962552626885,0.72995471815166,0,0,0,0,0,0.473227200159376,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0.402115889646523,0.185176890317059,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,1.17217447210047,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.199945982364114,1.2162378064119,0,2.10833939483032,0.479249710983165,0,0,0.144781306667579,0,0,0.336255431980582,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0.841980283299221,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0.460404944679482,0,0.910455840033585,0,0,0.0770153371044148,0,1.46139224653261,0.211103257785751,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0,0,0.366277859273374,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.322260734604821,0.145016693914229,0.255679882248303,0.0890320356467374,0,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0.320472213382419,0.962479855263359,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0.399158742865633,0.191505370132367,0.423347165447766,0.973865820823666,0,0.228234679033192,0.47003968731907,0,0.169291777801603,0.481764225311099,1.00899853595524,0.425846237690326,0,0,0,0.333698283423817,0.19538809540204,0.278406173895242,0,0,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0.852408440419239,0,0,0,0,0,0.111308705022906,0.329607748453519,0.63337622438398,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0,0.179736702294654,0,0.511572370226872,0,0,0,1.93866549219044,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0.344743373241465,0.291604613383254,1.56262495439963,0,0.120596438625408,0,0.110579259931225,0,0,0.10893846351899,0.27884748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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4673 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7637 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENST00000552147_5end | |||
|description=CAGE_peak_12_at_NAP1L1_5end | |||
|id=chr12:76461249..76461260,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000785;2.62e-12;1!CL:0000819;2.62e-12;1!CL:0000235;4.65e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.63e-12,1;CL:0000235,4.82e-08,6;CL:0000785,8.93e-07,2;CL:0000955,8.93e-07,2;CL:0000818,8.93e-07,2;CL:0000954,8.93e-07,2;CL:0000816,8.93e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;8.92e-07;2 | |||
|ontology_enrichment_disease=DOID:162!1.84e-12!235;DOID:14566!2.86e-12!239;DOID:0050687!3.96e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.62e-12;1!DOID:8675;2.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.63e-12,1;DOID:8675,2.63e-12,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p12@NAP1L1 | |||
}} |
Revision as of 00:28, 11 September 2013
Short description: | p12@NAP1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_NAP1L1_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000552147_5end |
EntrezGene: | NAP1L1 |
HGNC: | 7637 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.63e-12 | 1 |
macrophage | 4.82e-08 | 6 |
mature B cell | 8.93e-07 | 2 |
pre-B-II cell | 8.93e-07 | 2 |
transitional stage B cell | 8.93e-07 | 2 |
small pre-B-II cell | 8.93e-07 | 2 |
immature B cell | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.63e-12 | 1 |
lymphosarcoma | 2.63e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.