FFCP PHASE1:Hg19::chr12:8276205..8276219,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=50856|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13257|TSSclassifier=S|UniProt=Q9UMR7|association_with_transcript=-8bp_to_ENST00000229332,NM_016184,NM_194447,NM_194448,NM_194450,uc001qtz.1,uc001qub.1,uc001quc.1,uc009zga.1,uc009zgb.1_5end|coexpression_cluster_id=C623|description=CAGE_peak_2_at_CLEC4A_5end|id=chr12:8276205..8276219,+|ontology_enrichment_celltype=CL:0000766!3.79e-58!76;CL:0002009!7.03e-55!65;CL:0002194!9.68e-53!63;CL:0000576!9.68e-53!63;CL:0000040!9.68e-53!63;CL:0000559!9.68e-53!63;CL:0000557!7.28e-50!71;CL:0000839!2.58e-48!70;CL:0000738!1.59e-47!140;CL:0002057!4.50e-47!42;CL:0000860!8.87e-43!45;CL:0002087!5.69e-40!119;CL:0000763!5.97e-39!112;CL:0000049!5.97e-39!112;CL:0002031!4.15e-38!124;CL:0000037!1.12e-37!172;CL:0000566!1.12e-37!172;CL:0000988!7.09e-34!182;CL:0002032!9.98e-34!165;CL:0000837!9.98e-34!165;CL:0002393!4.34e-11!9;CL:0002397!4.34e-11!9;CL:0000094!1.62e-10!8;CL:0000840!2.93e-08!5;CL:0001029!2.93e-08!5;CL:0000081!4.93e-07!11;CL:0000134!7.70e-07!358|ontology_enrichment_celltype_v019=CL:0000473;5.88e-52;39!CL:0000234;5.88e-52;39!CL:0000860;2.70e-51;33!CL:0002057;2.70e-51;33!CL:0000576;1.87e-45;48!CL:0000766;5.34e-37;69!CL:0000738;1.95e-18;136!CL:0002087;5.90e-18;104!CL:0000763;2.01e-16;100!CL:0000094;2.61e-15;8!CL:0000235;1.73e-12;6!CL:0000840;7.82e-12;5!CL:0002393;5.27e-11;6!CL:0002397;5.27e-11;6!CL:0000081;1.20e-10;11!CL:0000236;1.21e-10;13!CL:0000988;3.92e-10;177!CL:0000451;5.45e-10;10!CL:0000219;1.41e-08;193!CL:0000990;1.45e-07;8!CL:0000775;1.78e-07;3!CL:0000875;8.83e-07;3!CL:0002396;8.83e-07;3|ontology_enrichment_celltype_v019_2=CL:0000766,1.46e-93,72;CL:0002009,2.78e-90,61;CL:0002194,6.06e-87,59;CL:0000576,6.06e-87,59;CL:0000040,6.06e-87,59;CL:0000559,6.06e-87,59;CL:0000473,3.11e-83,48;CL:0000234,3.11e-83,48;CL:0000557,1.09e-80,67;CL:0000738,6.10e-79,136;CL:0000839,5.50e-76,66;CL:0000860,1.11e-71,42;CL:0002057,1.11e-71,42;CL:0002087,3.21e-67,115;CL:0002031,1.11e-61,120;CL:0000763,2.24e-60,108;CL:0000049,2.24e-60,108;CL:0000037,1.54e-59,168;CL:0000988,2.42e-55,177;CL:0002032,1.70e-54,161;CL:0000837,1.70e-54,161;CL:0000134,4.48e-17,354;CL:0002320,2.55e-16,361;CL:0002393,3.49e-16,9;CL:0002397,3.49e-16,9;CL:0000094,2.64e-15,8;CL:0000219,1.12e-13,386;CL:0000235,1.70e-12,6;CL:0000840,7.61e-12,5;CL:0001029,7.61e-12,5;CL:0000048,1.47e-11,427;CL:0000723,4.22e-11,433;CL:0000034,4.88e-11,441;CL:0000081,1.21e-10,11;CL:0000451,5.35e-10,10;CL:0000236,6.59e-10,14;CL:0000990,1.42e-07,8;CL:0000775,1.77e-07,3;CL:0000875,8.50e-07,3;CL:0002396,8.50e-07,3|ontology_enrichment_development_v019=CL:0002057;5.81e-51;42!CL:0000049;4.26e-17;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.27e-55!102;UBERON:0003061!1.27e-55!102;UBERON:0002193!3.20e-51!112;UBERON:0002371!3.82e-43!80;UBERON:0001474!1.44e-38!86;UBERON:0002405!4.48e-33!115;UBERON:0004765!8.45e-32!101;UBERON:0001434!8.45e-32!101;UBERON:0007023!2.08e-25!115;UBERON:0003081!1.28e-18!216;UBERON:0002204!8.48e-15!167;UBERON:0000178!7.01e-11!15;UBERON:0000179!7.01e-11!15;UBERON:0000463!7.01e-11!15|ontology_enrichment_uberon_v019=UBERON:0000178;1.37e-16;15!UBERON:0000179;1.37e-16;15!UBERON:0000463;1.37e-16;15!UBERON:0002390;5.21e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.00e-83,98;UBERON:0003061,2.00e-83,98;UBERON:0002193,3.10e-78,108;UBERON:0002371,4.12e-69,76;UBERON:0001474,8.52e-63,82;UBERON:0002405,1.76e-61,93;UBERON:0004765,1.11e-55,90;UBERON:0001434,2.19e-48,100;UBERON:0003081,4.85e-34,203;UBERON:0002204,3.25e-24,167;UBERON:0000178,1.31e-16,15;UBERON:0000179,1.31e-16,15;UBERON:0000463,1.31e-16,15;UBERON:0000926,5.23e-16,315;UBERON:0004120,5.23e-16,315;UBERON:0006603,5.23e-16,315;UBERON:0002384,6.17e-16,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.26064981382698,6.52509976765262,5.72819656269481,0,0,0,0,0,0.293600439334847,9.97191735357379,3.60980005446255,3.90619567288533,21.7198010012727,11.3362783106643,21.6363476812717,16.4300009820908,9.44689859222024,10.1885305698883,17.8970358417377,13.1573724166984,25.3959224133985,12.3707728698525,13.3203567395132,27.4319386670759,12.4108445065183,15.4916324060118,13.5426486594342,12.4239944098119,8.18718450173537,31.4612878223118,15.610278510916,14.1208771913481,13.4260796417799,10.8850929061616,10.5715738539465,8.52449501065388,9.86711411337186,11.3477044938228,18.6846674698673,11.0549412712967,14.0800387973454,15.6375968187684,11.502590550034,20.9918252512912,31.9627011315293,22.1818050627539,14.2444880976579,25.7880133975302,41.2246076307637,48.9576670663311,34.2345499664781,25.6511469367124,13.7252507267372,19.3624002990512,1.75996244461323,7.09980194640771,2.66852776159066,8.53460445133014,6.80673177961221,3.4485146397269,1.98313461835459,1.90810750907073,1.70763890732835,0,1.14681968437569,0,2.24203425192614,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2530196920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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=50856 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13257 | |||
|TSSclassifier=S | |||
|UniProt=Q9UMR7 | |||
|association_with_transcript=-8bp_to_ENST00000229332,NM_016184,NM_194447,NM_194448,NM_194450,uc001qtz.1,uc001qub.1,uc001quc.1,uc009zga.1,uc009zgb.1_5end | |||
|coexpression_cluster_id=C623 | |||
|description=CAGE_peak_2_at_CLEC4A_5end | |||
|id=chr12:8276205..8276219,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.79e-58!76;CL:0002009!7.03e-55!65;CL:0002194!9.68e-53!63;CL:0000576!9.68e-53!63;CL:0000040!9.68e-53!63;CL:0000559!9.68e-53!63;CL:0000557!7.28e-50!71;CL:0000839!2.58e-48!70;CL:0000738!1.59e-47!140;CL:0002057!4.50e-47!42;CL:0000860!8.87e-43!45;CL:0002087!5.69e-40!119;CL:0000763!5.97e-39!112;CL:0000049!5.97e-39!112;CL:0002031!4.15e-38!124;CL:0000037!1.12e-37!172;CL:0000566!1.12e-37!172;CL:0000988!7.09e-34!182;CL:0002032!9.98e-34!165;CL:0000837!9.98e-34!165;CL:0002393!4.34e-11!9;CL:0002397!4.34e-11!9;CL:0000094!1.62e-10!8;CL:0000840!2.93e-08!5;CL:0001029!2.93e-08!5;CL:0000081!4.93e-07!11;CL:0000134!7.70e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.88e-52;39!CL:0000234;5.88e-52;39!CL:0000860;2.70e-51;33!CL:0002057;2.70e-51;33!CL:0000576;1.87e-45;48!CL:0000766;5.34e-37;69!CL:0000738;1.95e-18;136!CL:0002087;5.90e-18;104!CL:0000763;2.01e-16;100!CL:0000094;2.61e-15;8!CL:0000235;1.73e-12;6!CL:0000840;7.82e-12;5!CL:0002393;5.27e-11;6!CL:0002397;5.27e-11;6!CL:0000081;1.20e-10;11!CL:0000236;1.21e-10;13!CL:0000988;3.92e-10;177!CL:0000451;5.45e-10;10!CL:0000219;1.41e-08;193!CL:0000990;1.45e-07;8!CL:0000775;1.78e-07;3!CL:0000875;8.83e-07;3!CL:0002396;8.83e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.46e-93,72;CL:0002009,2.78e-90,61;CL:0002194,6.06e-87,59;CL:0000576,6.06e-87,59;CL:0000040,6.06e-87,59;CL:0000559,6.06e-87,59;CL:0000473,3.11e-83,48;CL:0000234,3.11e-83,48;CL:0000557,1.09e-80,67;CL:0000738,6.10e-79,136;CL:0000839,5.50e-76,66;CL:0000860,1.11e-71,42;CL:0002057,1.11e-71,42;CL:0002087,3.21e-67,115;CL:0002031,1.11e-61,120;CL:0000763,2.24e-60,108;CL:0000049,2.24e-60,108;CL:0000037,1.54e-59,168;CL:0000988,2.42e-55,177;CL:0002032,1.70e-54,161;CL:0000837,1.70e-54,161;CL:0000134,4.48e-17,354;CL:0002320,2.55e-16,361;CL:0002393,3.49e-16,9;CL:0002397,3.49e-16,9;CL:0000094,2.64e-15,8;CL:0000219,1.12e-13,386;CL:0000235,1.70e-12,6;CL:0000840,7.61e-12,5;CL:0001029,7.61e-12,5;CL:0000048,1.47e-11,427;CL:0000723,4.22e-11,433;CL:0000034,4.88e-11,441;CL:0000081,1.21e-10,11;CL:0000451,5.35e-10,10;CL:0000236,6.59e-10,14;CL:0000990,1.42e-07,8;CL:0000775,1.77e-07,3;CL:0000875,8.50e-07,3;CL:0002396,8.50e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.81e-51;42!CL:0000049;4.26e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-55!102;UBERON:0003061!1.27e-55!102;UBERON:0002193!3.20e-51!112;UBERON:0002371!3.82e-43!80;UBERON:0001474!1.44e-38!86;UBERON:0002405!4.48e-33!115;UBERON:0004765!8.45e-32!101;UBERON:0001434!8.45e-32!101;UBERON:0007023!2.08e-25!115;UBERON:0003081!1.28e-18!216;UBERON:0002204!8.48e-15!167;UBERON:0000178!7.01e-11!15;UBERON:0000179!7.01e-11!15;UBERON:0000463!7.01e-11!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.37e-16;15!UBERON:0000179;1.37e-16;15!UBERON:0000463;1.37e-16;15!UBERON:0002390;5.21e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.00e-83,98;UBERON:0003061,2.00e-83,98;UBERON:0002193,3.10e-78,108;UBERON:0002371,4.12e-69,76;UBERON:0001474,8.52e-63,82;UBERON:0002405,1.76e-61,93;UBERON:0004765,1.11e-55,90;UBERON:0001434,2.19e-48,100;UBERON:0003081,4.85e-34,203;UBERON:0002204,3.25e-24,167;UBERON:0000178,1.31e-16,15;UBERON:0000179,1.31e-16,15;UBERON:0000463,1.31e-16,15;UBERON:0000926,5.23e-16,315;UBERON:0004120,5.23e-16,315;UBERON:0006603,5.23e-16,315;UBERON:0002384,6.17e-16,371 | |||
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|short_description=p2@CLEC4A | |||
}} |
Revision as of 00:42, 11 September 2013
Short description: | p2@CLEC4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CLEC4A_5end |
Coexpression cluster: | C623_Dendritic_Neutrophils_Eosinophils_Whole_Macrophage_CD14_Basophils |
Association with transcript: | -8bp_to_ENST00000229332, NM_016184, NM_194447, NM_194448, NM_194450, uc001qtz.1, uc001qub.1, uc001quc.1, uc009zga.1, uc009zgb.1_5end |
EntrezGene: | CLEC4A |
HGNC: | 13257 |
UniProt: | Q9UMR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.00e-83 | 98 |
blood island | 2.00e-83 | 98 |
hemolymphoid system | 3.10e-78 | 108 |
bone marrow | 4.12e-69 | 76 |
bone element | 8.52e-63 | 82 |
immune system | 1.76e-61 | 93 |
skeletal element | 1.11e-55 | 90 |
skeletal system | 2.19e-48 | 100 |
lateral plate mesoderm | 4.85e-34 | 203 |
musculoskeletal system | 3.25e-24 | 167 |
blood | 1.31e-16 | 15 |
haemolymphatic fluid | 1.31e-16 | 15 |
organism substance | 1.31e-16 | 15 |
mesoderm | 5.23e-16 | 315 |
mesoderm-derived structure | 5.23e-16 | 315 |
presumptive mesoderm | 5.23e-16 | 315 |
connective tissue | 6.17e-16 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.