FFCP PHASE1:Hg19::chr12:8850471..8850534,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57494|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29228|TSSclassifier=S|UniProt=Q9ULI2|association_with_transcript=0bp_to_ENST00000357529,ENST00000535829,NM_020734,uc001quw.2,uc001qux.2,uc010sgl.1_5end|description=CAGE_peak_2_at_RIMKLB_5end|id=chr12:8850471..8850534,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3095!8.83e-09!22;DOID:2994!8.83e-09!22|ontology_enrichment_disease_v019=DOID:3095;1.06e-09;22!DOID:2994;1.06e-09;22|ontology_enrichment_disease_v019_2=DOID:3095,3.11e-09,22;DOID:2994,3.11e-09,22|ontology_enrichment_uberon=UBERON:0001017!5.60e-09!82;UBERON:0000073!1.51e-08!94;UBERON:0001016!1.51e-08!94;UBERON:0005743!3.03e-08!86;UBERON:0001049!4.45e-08!57;UBERON:0005068!4.45e-08!57;UBERON:0006241!4.45e-08!57;UBERON:0007135!4.45e-08!57;UBERON:0002346!9.11e-07!90|ontology_enrichment_uberon_v019=UBERON:0003135;7.34e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.99e-09,89;UBERON:0001017,8.50e-09,81;UBERON:0001049,3.09e-08,56;UBERON:0005068,3.09e-08,56;UBERON:0006241,3.09e-08,56;UBERON:0007135,3.09e-08,56;UBERON:0000073,2.68e-07,53;UBERON:0002616,2.68e-07,53;UBERON:0003135,4.73e-07,11;UBERON:0007023,9.30e-07,114|phase1_expression=0.908391896352783,1.49870366723688,0.845726424575827,1.0007329835313,2.23480547213644,0.872338524100369,0,0,0.783556884599516,0.491467873003018,0,1.31064823278103,1.84636884759917,0.866364470720326,0.331397375727916,1.34465029290355,3.01347264011988,4.38186054232424,2.43966399395253,0.984968464614303,1.63200552995402,0.626909442956176,3.14859585844162,2.05311637609326,1.88313959392204,0,0,0,0.786728553697808,0,1.85779347979291,1.83884244895785,0.90361775633475,0.739508020333575,2.55641761914995,1.56386155736164,4.11040615068786,2.21598163412751,1.60435557976113,2.82114131930607,1.56740831967947,0.971680998056939,0,1.89017710413434,1.88937971844405,1.4555043671269,1.85943229524548,2.05583944010913,1.54853185447552,0.575384784644301,2.0492856522328,0.709446689665756,2.06847408441971,0.645484683583826,2.70852973188684,1.12945403725563,1.09162460023138,1.34834090667051,1.22433556948361,1.28371610830437,1.91801137739712,0.989553900560148,1.79517291859469,0.852449501065388,1.45104619314292,2.8369261234557,3.73693349397345,0.75374599577023,1.5644487552606,1.52032191293582,1.21079900526674,1.10483290796269,0.632924774881769,0.211255286311942,0.637812899895131,0.628975936525128,0.786300418025466,0.450530678524519,0.64290234678832,0.285012743741249,0.19891667719909,0.365328307529268,0,2.18455444504853,0.889509253863555,1.28019066769952,1.20118796110804,3.4485146397269,1.98313461835459,0,3.41527781465669,1.17447437874188,1.14681968437569,2.64342657158052,2.24203425192614,2.89722493252585,0.590129310341499,0.393010762749165,0.411202997999018,0,1.30368906653436,1.4203434172042,1.94826728407911,0,0.294605907474837,0,0,0,0,0,0.829050053357545,0.289803085735052,1.03800594213442,0.802622484269139,0,0.113309342697566,0,0.34362744548263,0.253019692019503,1.27426165729639,0,0.950452044448374,1.05402583354441,1.02389288923535,0,1.65744076430812,0.821127996921047,0.403213486449465,0,1.30341963494519,0,0,1.15076305659177,0.361439152384566,1.00267582127178,0.289693037921647,0.795285947051099,1.45990461090791,2.07976597760949,3.32594096193846,2.19586964232815,3.6019245761871,1.45718115317017,0.370784442784429,0,0.174129737299267,0.26591592103773,0,0.571994910780128,0,3.18019851786728,0.860234595106124,2.08284300964557,1.13061588384802,4.19499436209906,2.20094433552054,1.46296476575767,2.32575083252396,2.84613010149368,3.01248551488203,1.61131726843659,1.52054421143703,3.1728067481262,2.20597848207521,2.43042584364528,2.76829157680647,5.38870494302808,3.49095589498299,0,0.949265659568129,1.83201743930407,3.9534125230819,0,1.3082821564276,2.48485975847659,1.2663051166458,3.97227542439656,2.86836620748814,1.41867352879343,1.12135520028461,0,2.4666754841716,0.622422070799533,1.48181739276657,0.980771418680752,0.605429710579726,0.576175924479999,1.40592859100278,0,0.570471821544449,0.149448680551801,2.23125547423153,0.809364721840658,0.702254033511242,0.204154171254893,0.491337269247072,1.34323515528495,0,1.48360157567134,0,1.43723628363248,0.673344455816265,0.750711119231785,0.831192346452549,1.75591048352335,0.919463387397059,2.55404700141215,0.907457465280168,3.22901344239952,1.49490172172997,1.69545520927649,1.80054657650641,1.13357782162283,3.86460810068444,2.23340227597908,4.05063197379039,1.65642908774038,3.5340728394176,1.19664868234989,1.2931684545505,3.19508633264953,1.71278566986988,1.18692414617341,0.193260853163297,1.36373060295417,0.860413786167011,12.9292128497371,12.9879172955056,13.5946913157337,8.08556229119889,8.07426722802011,11.6792754904266,1.56449532329816,1.28648187638577,0,0.464367928031979,0.721879481669586,1.65629520055781,2.69735504124963,2.41011029883482,1.8749975364507,1.52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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29228 | |||
|TSSclassifier=S | |||
|UniProt=Q9ULI2 | |||
|association_with_transcript=0bp_to_ENST00000357529,ENST00000535829,NM_020734,uc001quw.2,uc001qux.2,uc010sgl.1_5end | |||
|description=CAGE_peak_2_at_RIMKLB_5end | |||
|id=chr12:8850471..8850534,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!8.83e-09!22;DOID:2994!8.83e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.06e-09;22!DOID:2994;1.06e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.11e-09,22;DOID:2994,3.11e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.60e-09!82;UBERON:0000073!1.51e-08!94;UBERON:0001016!1.51e-08!94;UBERON:0005743!3.03e-08!86;UBERON:0001049!4.45e-08!57;UBERON:0005068!4.45e-08!57;UBERON:0006241!4.45e-08!57;UBERON:0007135!4.45e-08!57;UBERON:0002346!9.11e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;7.34e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.99e-09,89;UBERON:0001017,8.50e-09,81;UBERON:0001049,3.09e-08,56;UBERON:0005068,3.09e-08,56;UBERON:0006241,3.09e-08,56;UBERON:0007135,3.09e-08,56;UBERON:0000073,2.68e-07,53;UBERON:0002616,2.68e-07,53;UBERON:0003135,4.73e-07,11;UBERON:0007023,9.30e-07,114 | |||
|phase1_expression=0.908391896352783,1.49870366723688,0.845726424575827,1.0007329835313,2.23480547213644,0.872338524100369,0,0,0.783556884599516,0.491467873003018,0,1.31064823278103,1.84636884759917,0.866364470720326,0.331397375727916,1.34465029290355,3.01347264011988,4.38186054232424,2.43966399395253,0.984968464614303,1.63200552995402,0.626909442956176,3.14859585844162,2.05311637609326,1.88313959392204,0,0,0,0.786728553697808,0,1.85779347979291,1.83884244895785,0.90361775633475,0.739508020333575,2.55641761914995,1.56386155736164,4.11040615068786,2.21598163412751,1.60435557976113,2.82114131930607,1.56740831967947,0.971680998056939,0,1.89017710413434,1.88937971844405,1.4555043671269,1.85943229524548,2.05583944010913,1.54853185447552,0.575384784644301,2.0492856522328,0.709446689665756,2.06847408441971,0.645484683583826,2.70852973188684,1.12945403725563,1.09162460023138,1.34834090667051,1.22433556948361,1.28371610830437,1.91801137739712,0.989553900560148,1.79517291859469,0.852449501065388,1.45104619314292,2.8369261234557,3.73693349397345,0.75374599577023,1.5644487552606,1.52032191293582,1.21079900526674,1.10483290796269,0.632924774881769,0.211255286311942,0.637812899895131,0.628975936525128,0.786300418025466,0.450530678524519,0.64290234678832,0.285012743741249,0.19891667719909,0.365328307529268,0,2.18455444504853,0.889509253863555,1.28019066769952,1.20118796110804,3.4485146397269,1.98313461835459,0,3.41527781465669,1.17447437874188,1.14681968437569,2.64342657158052,2.24203425192614,2.89722493252585,0.590129310341499,0.393010762749165,0.411202997999018,0,1.30368906653436,1.4203434172042,1.94826728407911,0,0.294605907474837,0,0,0,0,0,0.829050053357545,0.289803085735052,1.03800594213442,0.802622484269139,0,0.113309342697566,0,0.34362744548263,0.253019692019503,1.27426165729639,0,0.950452044448374,1.05402583354441,1.02389288923535,0,1.65744076430812,0.821127996921047,0.403213486449465,0,1.30341963494519,0,0,1.15076305659177,0.361439152384566,1.00267582127178,0.289693037921647,0.795285947051099,1.45990461090791,2.07976597760949,3.32594096193846,2.19586964232815,3.6019245761871,1.45718115317017,0.370784442784429,0,0.174129737299267,0.26591592103773,0,0.571994910780128,0,3.18019851786728,0.860234595106124,2.08284300964557,1.13061588384802,4.19499436209906,2.20094433552054,1.46296476575767,2.32575083252396,2.84613010149368,3.01248551488203,1.61131726843659,1.52054421143703,3.1728067481262,2.20597848207521,2.43042584364528,2.76829157680647,5.38870494302808,3.49095589498299,0,0.949265659568129,1.83201743930407,3.9534125230819,0,1.3082821564276,2.48485975847659,1.2663051166458,3.97227542439656,2.86836620748814,1.41867352879343,1.12135520028461,0,2.4666754841716,0.622422070799533,1.48181739276657,0.980771418680752,0.605429710579726,0.576175924479999,1.40592859100278,0,0.570471821544449,0.149448680551801,2.23125547423153,0.809364721840658,0.702254033511242,0.204154171254893,0.491337269247072,1.34323515528495,0,1.48360157567134,0,1.43723628363248,0.673344455816265,0.750711119231785,0.831192346452549,1.75591048352335,0.919463387397059,2.55404700141215,0.907457465280168,3.22901344239952,1.49490172172997,1.69545520927649,1.80054657650641,1.13357782162283,3.86460810068444,2.23340227597908,4.05063197379039,1.65642908774038,3.5340728394176,1.19664868234989,1.2931684545505,3.19508633264953,1.71278566986988,1.18692414617341,0.193260853163297,1.36373060295417,0.860413786167011,12.9292128497371,12.9879172955056,13.5946913157337,8.08556229119889,8.07426722802011,11.6792754904266,1.56449532329816,1.28648187638577,0,0.464367928031979,0.721879481669586,1.65629520055781,2.69735504124963,2.41011029883482,1.8749975364507,1.52515610864684,1.66089433377768,1.61797569792197,2.74710051175484,1.53898862778556,2.95262181849859,0,0.8231480226628,0,0,1.96565443335525,2.95394953340702,3.97316789473185,0.245976877086227,1.02940686179115,0.658501712451753,1.1240175325762,1.10581869652794,1.48141512253647,0.651616610620649,1.03993478527958,1.44331342025273,1.27523445472584,1.40890433082986,1.29929802984966,2.77791307545966,1.33177906564219,1.58040879591855,0.858486162094873,2.70838706696137,0.468008530278475,0.743155811443641,0,1.51183915378974,1.13420077793909,1.52249488594842,0.871901815541886,0.383382679165211,0,1.05658120815871,4.14656231081544,3.31475892859011,3.28230326908588,1.96843472305724,0.763976851116555,1.17217447210047,0,1.13110241973656,0.901029173531752,1.42913216315289,0.897048674762886,0,1.0267360014933,0.775630294546667,0,1.690605505112,0,1.04007436911366,1.02882949704857,1.41849132023278,0.532844358032199,0.428933980974443,1.08524321078289,0.823240336780769,0.325736184293735,0,2.37585561880029,0.602878754119172,1.74306691720059,1.09970290300263,0,0,0,2.39624855491583,1.14861935834114,2.85273810081437,0.579125226670317,1.2328579353023,3.22309733831812,0,0.394061520403854,0.431255149719035,0.128343036279748,1.77866236955724,5.20559415430487,1.54657762555539,2.01019518401218,2.55175500661265,0.749007023947182,0,0,0,0.500170521059677,0,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| |||
|short_description=p2@RIMKLB | |||
}} |
Revision as of 00:47, 11 September 2013
Short description: | p2@RIMKLB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RIMKLB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357529, ENST00000535829, NM_020734, uc001quw.2, uc001qux.2, uc010sgl.1_5end |
EntrezGene: | RIMKLB |
HGNC: | 29228 |
UniProt: | Q9ULI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 6.99e-09 | 89 |
central nervous system | 8.50e-09 | 81 |
neural tube | 3.09e-08 | 56 |
neural rod | 3.09e-08 | 56 |
future spinal cord | 3.09e-08 | 56 |
neural keel | 3.09e-08 | 56 |
regional part of nervous system | 2.68e-07 | 53 |
regional part of brain | 2.68e-07 | 53 |
male reproductive organ | 4.73e-07 | 11 |
adult organism | 9.30e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.11e-09 | 22 |
germ cell cancer | 3.11e-09 | 22 |
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