FFCP PHASE1:Hg19::chr12:91502618..91502636,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4060|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=6724|TSSclassifier=W|UniProt=P51884|association_with_transcript=119bp_to_AB590375,BT006707,CU675507,CU690252,DQ892554,DQ895765_5end|coexpression_cluster_id=C1371|description=CAGE_peak_7_at_LUM_5end|id=chr12:91502618..91502636,-|ontology_enrichment_celltype=CL:0000057!4.19e-10!75;CL:0002620!5.12e-10!23;CL:0000055!1.71e-07!180;CL:0000499!8.33e-07!27|ontology_enrichment_celltype_v019=CL:0000135;1.72e-13;3!CL:0000388;1.72e-13;3!CL:0002504;4.54e-12;3!CL:1000279;4.54e-12;3!CL:1000280;4.54e-12;3!CL:0000153;1.22e-10;9!CL:0000447;1.22e-10;9!CL:0002617;2.22e-08;2!CL:0000499;6.71e-08;28!CL:0000136;2.33e-07;13|ontology_enrichment_celltype_v019_2=CL:0000135,1.73e-13,3;CL:0000388,1.73e-13,3;CL:0002504,6.20e-12,3;CL:1000279,6.20e-12,3;CL:1000280,6.20e-12,3;CL:0000153,1.68e-10,9;CL:0000447,1.68e-10,9;CL:0000136,7.60e-09,15;CL:0002617,3.37e-08,2;CL:0000499,7.86e-08,28|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!5.12e-09!9;UBERON:0003688!1.56e-07!6;UBERON:0002358!1.56e-07!6;UBERON:0003684!1.56e-07!6;UBERON:0001178!1.56e-07!6;UBERON:0004457!2.59e-07!12;UBERON:0000042!2.59e-07!12;UBERON:0002199!2.99e-07!45;UBERON:0002416!2.99e-07!45;UBERON:0002097!3.01e-07!40|ontology_enrichment_uberon_v019=UBERON:0004457;4.22e-15;9!UBERON:0000042;4.22e-15;9!UBERON:0007846;1.72e-13;3!UBERON:0000043;1.72e-13;3!UBERON:0007845;1.72e-13;3!UBERON:0003688;6.68e-11;6!UBERON:0002358;6.68e-11;6!UBERON:0003684;6.68e-11;6!UBERON:0001178;6.68e-11;6|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.73e-13,3;UBERON:0000043,1.73e-13,3;UBERON:0007845,1.73e-13,3;UBERON:0004457,5.10e-11,12;UBERON:0000042,5.10e-11,12;UBERON:0003688,9.48e-11,6;UBERON:0002358,9.48e-11,6;UBERON:0003684,9.48e-11,6;UBERON:0001178,9.48e-11,6;UBERON:0004923,7.09e-07,66|phase1_expression=1.09007027562334,1.2846031433459,0.281908808191942,3.00219895059391,3.12872766099101,2.61701557230111,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,1.0843174571537,0,3.0417768981773,0.795285947051099,5.35298357332899,0,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,0.12663051166458,0.132409180813219,0.573673241497627,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0.113432183160021,1.25572744982203,1.92201649936711,0.635795703478686,0.600182192168805,0.515262646192195,1.54584324027377,0.930584281657949,0.168776332241266,0,0.757301322732344,0.828449087780694,0.323292113637624,2.13005755509969,0.503760491138201,0,0,0,0,0,0,0.116193942869518,0,0,0,0,1.28648187638577,0,1.39310378409594,0.721879481669586,0.473227200159376,0.505754070234305,0.964044119533928,0.772057809126758,0.871517776369625,0.474541238222193,0.404493924480493,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.831883446123229,1.07057393278297,0,0.234282829985426,0,4.5481500811197,1.03473071292505,0,0,0.347534457872331,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.920771839728375,1.12264037773229,0.512556597022804,2.04682899626681,1.12597744800525,0,0.154209693802656,0,0.164254312027618,0,0.348631135379878,0,0,0,0.34444334449382,0.910455840033585,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.824125183365091,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,1.07923474549989,2.47083326762449,1.29593642580255,0,0,0,0,0,0,0.272999822815972,0.565621727814851,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0.196498082026242,0,0,0.844430541190656,1.31717957183961,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.23874448473769,1.48482340416319,0.614321404198464,0,0,0,0,0,0.398495976502139,0,0,0,0,0.933118762985422,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0,0,1.27600463892768,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,3.21031058919516,0,0,0,0,0.394584402849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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4060 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6724 | |||
|TSSclassifier=W | |||
|UniProt=P51884 | |||
|association_with_transcript=119bp_to_AB590375,BT006707,CU675507,CU690252,DQ892554,DQ895765_5end | |||
|coexpression_cluster_id=C1371 | |||
|description=CAGE_peak_7_at_LUM_5end | |||
|id=chr12:91502618..91502636,- | |||
|ontology_enrichment_celltype=CL:0000057!4.19e-10!75;CL:0002620!5.12e-10!23;CL:0000055!1.71e-07!180;CL:0000499!8.33e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.72e-13;3!CL:0000388;1.72e-13;3!CL:0002504;4.54e-12;3!CL:1000279;4.54e-12;3!CL:1000280;4.54e-12;3!CL:0000153;1.22e-10;9!CL:0000447;1.22e-10;9!CL:0002617;2.22e-08;2!CL:0000499;6.71e-08;28!CL:0000136;2.33e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.73e-13,3;CL:0000388,1.73e-13,3;CL:0002504,6.20e-12,3;CL:1000279,6.20e-12,3;CL:1000280,6.20e-12,3;CL:0000153,1.68e-10,9;CL:0000447,1.68e-10,9;CL:0000136,7.60e-09,15;CL:0002617,3.37e-08,2;CL:0000499,7.86e-08,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!5.12e-09!9;UBERON:0003688!1.56e-07!6;UBERON:0002358!1.56e-07!6;UBERON:0003684!1.56e-07!6;UBERON:0001178!1.56e-07!6;UBERON:0004457!2.59e-07!12;UBERON:0000042!2.59e-07!12;UBERON:0002199!2.99e-07!45;UBERON:0002416!2.99e-07!45;UBERON:0002097!3.01e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.22e-15;9!UBERON:0000042;4.22e-15;9!UBERON:0007846;1.72e-13;3!UBERON:0000043;1.72e-13;3!UBERON:0007845;1.72e-13;3!UBERON:0003688;6.68e-11;6!UBERON:0002358;6.68e-11;6!UBERON:0003684;6.68e-11;6!UBERON:0001178;6.68e-11;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.73e-13,3;UBERON:0000043,1.73e-13,3;UBERON:0007845,1.73e-13,3;UBERON:0004457,5.10e-11,12;UBERON:0000042,5.10e-11,12;UBERON:0003688,9.48e-11,6;UBERON:0002358,9.48e-11,6;UBERON:0003684,9.48e-11,6;UBERON:0001178,9.48e-11,6;UBERON:0004923,7.09e-07,66 | |||
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|short_description=p7@LUM | |||
}} |
Revision as of 00:55, 11 September 2013
Short description: | p7@LUM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_LUM_5end |
Coexpression cluster: | C1371_tenocyte_Chondrocyte_placenta_Fibroblast_skin_mesenchymal_chorionic |
Association with transcript: | 119bp_to_AB590375, BT006707, CU675507, CU690252, DQ892554, DQ895765_5end |
EntrezGene: | LUM |
HGNC: | 6724 |
UniProt: | P51884 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.73e-13 | 3 |
tendon cell | 1.73e-13 | 3 |
enteric smooth muscle cell | 6.20e-12 | 3 |
smooth muscle cell of large intestine | 6.20e-12 | 3 |
smooth muscle cell of colon | 6.20e-12 | 3 |
GAG secreting cell | 1.68e-10 | 9 |
carbohydrate secreting cell | 1.68e-10 | 9 |
fat cell | 7.60e-09 | 15 |
adipocyte of breast | 3.37e-08 | 2 |
stromal cell | 7.86e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.73e-13 | 3 |
tendon | 1.73e-13 | 3 |
regular connective tissue | 1.73e-13 | 3 |
cavity lining | 5.10e-11 | 12 |
serous membrane | 5.10e-11 | 12 |
omentum | 9.48e-11 | 6 |
peritoneum | 9.48e-11 | 6 |
abdominal cavity | 9.48e-11 | 6 |
visceral peritoneum | 9.48e-11 | 6 |
organ component layer | 7.09e-07 | 66 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.