FFCP PHASE1:Hg19::chr12:96649237..96649251,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2004|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3325|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000549529_5end|coexpression_cluster_id=C81|description=CAGE_peak_15_at_ELK3_5end|id=chr12:96649237..96649251,+|ontology_enrichment_celltype=CL:0002057!3.65e-12!42;CL:0000860!4.37e-11!45;CL:0002009!1.46e-08!65;CL:0000557!1.76e-08!71;CL:0001014!5.04e-07!2;CL:0001016!5.04e-07!2|ontology_enrichment_celltype_v019=CL:0001014;9.78e-45;2!CL:0001016;9.78e-45;2!CL:0000453;1.35e-18;5!CL:0000840;1.13e-15;5!CL:0002262;2.90e-12;2!CL:1000398;2.90e-12;2!CL:0000990;8.79e-11;8!CL:0000451;5.41e-09;10!CL:0002541;1.30e-08;3|ontology_enrichment_celltype_v019_2=CL:0001014,7.83e-45,2;CL:0001016,7.83e-45,2;CL:0000453,1.24e-18,5;CL:0000840,1.05e-15,5;CL:0001029,1.05e-15,5;CL:0002262,3.24e-12,2;CL:1000398,3.24e-12,2;CL:0000990,8.37e-11,8;CL:0000451,5.20e-09,10;CL:0002541,1.12e-08,3|ontology_enrichment_development_v019=UBERON:0008947;1.42e-07;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.84e-07!80;UBERON:0002405!6.42e-07!115;UBERON:0000341!9.83e-07!2|ontology_enrichment_uberon_v019=UBERON:0003127;1.65e-12;2!UBERON:0000341;2.90e-12;2!UBERON:0001281;2.90e-12;2!UBERON:0003497;2.90e-12;2!UBERON:0003909;2.90e-12;2!UBERON:0003835;2.90e-12;2!UBERON:0003124;1.30e-08;3!UBERON:0000920;1.30e-08;3!UBERON:0001280;1.30e-08;3!UBERON:0004647;1.30e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.65e-12,2;UBERON:0000341,2.90e-12,2;UBERON:0001281,3.24e-12,2;UBERON:0003497,3.24e-12,2;UBERON:0003909,3.24e-12,2;UBERON:0003835,3.24e-12,2;UBERON:0000920,1.12e-08,3;UBERON:0001280,1.40e-08,3;UBERON:0004647,1.40e-08,3;UBERON:0005171,1.40e-08,3|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0.464858073811369,0.822335776043652,0,0,0.256160706529101,0.709446689665756,0.344745680736619,1.29096936716765,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0.398927315243264,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0.267899184852239,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,3.82455615637551,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13574825135389,7.23139803458463,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0.754814217833368,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,1.42838658878244,0,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,4.94883217209467,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p15@ELK3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2004 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3325 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000549529_5end | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_15_at_ELK3_5end | |||
|id=chr12:96649237..96649251,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.65e-12!42;CL:0000860!4.37e-11!45;CL:0002009!1.46e-08!65;CL:0000557!1.76e-08!71;CL:0001014!5.04e-07!2;CL:0001016!5.04e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0001014;9.78e-45;2!CL:0001016;9.78e-45;2!CL:0000453;1.35e-18;5!CL:0000840;1.13e-15;5!CL:0002262;2.90e-12;2!CL:1000398;2.90e-12;2!CL:0000990;8.79e-11;8!CL:0000451;5.41e-09;10!CL:0002541;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,7.83e-45,2;CL:0001016,7.83e-45,2;CL:0000453,1.24e-18,5;CL:0000840,1.05e-15,5;CL:0001029,1.05e-15,5;CL:0002262,3.24e-12,2;CL:1000398,3.24e-12,2;CL:0000990,8.37e-11,8;CL:0000451,5.20e-09,10;CL:0002541,1.12e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.42e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.84e-07!80;UBERON:0002405!6.42e-07!115;UBERON:0000341!9.83e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.65e-12;2!UBERON:0000341;2.90e-12;2!UBERON:0001281;2.90e-12;2!UBERON:0003497;2.90e-12;2!UBERON:0003909;2.90e-12;2!UBERON:0003835;2.90e-12;2!UBERON:0003124;1.30e-08;3!UBERON:0000920;1.30e-08;3!UBERON:0001280;1.30e-08;3!UBERON:0004647;1.30e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.65e-12,2;UBERON:0000341,2.90e-12,2;UBERON:0001281,3.24e-12,2;UBERON:0003497,3.24e-12,2;UBERON:0003909,3.24e-12,2;UBERON:0003835,3.24e-12,2;UBERON:0000920,1.12e-08,3;UBERON:0001280,1.40e-08,3;UBERON:0004647,1.40e-08,3;UBERON:0005171,1.40e-08,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0.464858073811369,0.822335776043652,0,0,0.256160706529101,0.709446689665756,0.344745680736619,1.29096936716765,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0.398927315243264,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0.267899184852239,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,3.82455615637551,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13574825135389,7.23139803458463,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0.754814217833368,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,1.42838658878244,0,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,4.94883217209467,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p15@ELK3 | |||
}} |
Revision as of 01:08, 11 September 2013
Short description: | p15@ELK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_ELK3_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 0bp_to_ENST00000549529_5end |
EntrezGene: | ELK3 |
HGNC: | 3325 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 7.83e-45 | 2 |
immature CD1a-positive Langerhans cell | 7.83e-45 | 2 |
Langerhans cell | 1.24e-18 | 5 |
immature conventional dendritic cell | 1.05e-15 | 5 |
common dendritic progenitor | 1.05e-15 | 5 |
endothelial cell of sinusoid | 3.24e-12 | 2 |
endothelial cell of hepatic sinusoid | 3.24e-12 | 2 |
conventional dendritic cell | 8.37e-11 | 8 |
dendritic cell | 5.20e-09 | 10 |
chorionic membrane mesenchymal stem cell | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.65e-12 | 2 |
throat | 2.90e-12 | 2 |
hepatic sinusoid | 3.24e-12 | 2 |
abdomen blood vessel | 3.24e-12 | 2 |
sinusoid | 3.24e-12 | 2 |
abdominal segment blood vessel | 3.24e-12 | 2 |
egg chorion | 1.12e-08 | 3 |
liver parenchyma | 1.40e-08 | 3 |
liver lobule | 1.40e-08 | 3 |
hepatic duct | 1.40e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.