FFCP PHASE1:Hg19::chr13:73636073..73636084,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:73636073..73636084,+|id=chr13:73636073..73636084,+|ontology_enrichment_celltype=CL:0002076!1.70e-15!43;CL:0000066!1.39e-11!254;CL:0000223!1.50e-10!59;CL:0002251!3.60e-09!21|ontology_enrichment_celltype_v019=CL:0000622;9.89e-18;5!CL:0000154;7.04e-15;6!CL:0002623;9.28e-14;3!CL:0000150;4.18e-10;9!CL:0002076;6.09e-10;42!CL:0002368;4.66e-07;13|ontology_enrichment_celltype_v019_2=CL:0000622,1.40e-17,5;CL:0000154,9.37e-15,6;CL:0002623,1.24e-13,3;CL:0002076,1.71e-13,42;CL:0000150,5.05e-10,9;CL:0000223,1.67e-09,58;CL:0002368,4.81e-07,13|ontology_enrichment_development_v019=UBERON:0006298;9.49e-11;1!CL:0000223;8.70e-07;58|ontology_enrichment_disease=DOID:305!1.50e-16!106;DOID:0050687!1.10e-11!143;DOID:1749!5.78e-08!14;DOID:299!8.15e-07!25|ontology_enrichment_disease_v019=DOID:3151;9.49e-11;1!DOID:3149;9.49e-11;1|ontology_enrichment_disease_v019_2=DOID:3151,1.77e-10,1;DOID:3149,1.77e-10,1|ontology_enrichment_uberon=UBERON:0004119!1.79e-16!169;UBERON:0000925!1.79e-16!169;UBERON:0006595!1.79e-16!169;UBERON:0001007!1.74e-14!155;UBERON:0001555!1.74e-14!155;UBERON:0007026!1.74e-14!155;UBERON:0001004!5.40e-12!72;UBERON:0004921!6.87e-12!129;UBERON:0004185!6.87e-12!129;UBERON:0000065!8.43e-10!53;UBERON:0000077!4.06e-09!130;UBERON:0000161!7.79e-09!35;UBERON:0008947!4.29e-07!38;UBERON:0003258!4.29e-07!38|ontology_enrichment_uberon_v019=UBERON:0001044;7.04e-15;6!UBERON:0003293;7.04e-15;6!UBERON:0003294;7.04e-15;6!UBERON:0010047;7.04e-15;6!UBERON:0003408;7.04e-15;6!UBERON:0000167;7.04e-15;6!UBERON:0001723;1.70e-13;3!UBERON:0001033;1.70e-13;3!UBERON:0000165;7.37e-12;28!UBERON:0007029;3.75e-11;1!UBERON:0001736;9.49e-11;1!UBERON:0000014;1.50e-10;4!UBERON:0000161;2.54e-08;19!UBERON:0000166;2.54e-08;19!UBERON:0000974;1.67e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0000166,2.95e-15,22;UBERON:0001044,7.75e-15,6;UBERON:0003293,7.75e-15,6;UBERON:0003294,7.75e-15,6;UBERON:0010047,7.75e-15,6;UBERON:0000167,7.75e-15,6;UBERON:0001723,1.09e-13,3;UBERON:0001033,1.09e-13,3;UBERON:0010056,1.09e-13,3;UBERON:0000161,2.31e-12,36;UBERON:0000165,1.78e-11,29;UBERON:0000930,1.78e-11,29;UBERON:0007029,4.15e-11,1;UBERON:0001736,7.46e-11,1;UBERON:0006298,7.46e-11,1;UBERON:0000014,2.15e-10,4;UBERON:0001004,3.65e-09,74;UBERON:0003408,4.03e-09,10;UBERON:0003102,3.75e-08,99;UBERON:0004119,6.23e-08,160;UBERON:0000925,6.23e-08,160;UBERON:0006595,6.23e-08,160;UBERON:0000153,7.09e-07,62;UBERON:0007811,7.09e-07,62|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0.25618263945135,0.130059347559878,0,0,0,0.444859689486181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0.723033089650446,0.330881918197182,0.435758888184812,0.237270619111097,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.329250856225877,0,0.804231779293047,0.462942225792648,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0.197030760201927,0,0,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.846016147141356,0.200506470303285,2.4861867012692,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,0,1.30012049207304,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0.661139661443912,1.34533047155574,0.127612712494584,1.11273558941105,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.980160863924127,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0.63337622438398,0.19924798825107,0.2762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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:73636073..73636084,+ | |||
|id=chr13:73636073..73636084,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.70e-15!43;CL:0000066!1.39e-11!254;CL:0000223!1.50e-10!59;CL:0002251!3.60e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0000622;9.89e-18;5!CL:0000154;7.04e-15;6!CL:0002623;9.28e-14;3!CL:0000150;4.18e-10;9!CL:0002076;6.09e-10;42!CL:0002368;4.66e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.40e-17,5;CL:0000154,9.37e-15,6;CL:0002623,1.24e-13,3;CL:0002076,1.71e-13,42;CL:0000150,5.05e-10,9;CL:0000223,1.67e-09,58;CL:0002368,4.81e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0006298;9.49e-11;1!CL:0000223;8.70e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.50e-16!106;DOID:0050687!1.10e-11!143;DOID:1749!5.78e-08!14;DOID:299!8.15e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3151;9.49e-11;1!DOID:3149;9.49e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.77e-10,1;DOID:3149,1.77e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.79e-16!169;UBERON:0000925!1.79e-16!169;UBERON:0006595!1.79e-16!169;UBERON:0001007!1.74e-14!155;UBERON:0001555!1.74e-14!155;UBERON:0007026!1.74e-14!155;UBERON:0001004!5.40e-12!72;UBERON:0004921!6.87e-12!129;UBERON:0004185!6.87e-12!129;UBERON:0000065!8.43e-10!53;UBERON:0000077!4.06e-09!130;UBERON:0000161!7.79e-09!35;UBERON:0008947!4.29e-07!38;UBERON:0003258!4.29e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;7.04e-15;6!UBERON:0003293;7.04e-15;6!UBERON:0003294;7.04e-15;6!UBERON:0010047;7.04e-15;6!UBERON:0003408;7.04e-15;6!UBERON:0000167;7.04e-15;6!UBERON:0001723;1.70e-13;3!UBERON:0001033;1.70e-13;3!UBERON:0000165;7.37e-12;28!UBERON:0007029;3.75e-11;1!UBERON:0001736;9.49e-11;1!UBERON:0000014;1.50e-10;4!UBERON:0000161;2.54e-08;19!UBERON:0000166;2.54e-08;19!UBERON:0000974;1.67e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,2.95e-15,22;UBERON:0001044,7.75e-15,6;UBERON:0003293,7.75e-15,6;UBERON:0003294,7.75e-15,6;UBERON:0010047,7.75e-15,6;UBERON:0000167,7.75e-15,6;UBERON:0001723,1.09e-13,3;UBERON:0001033,1.09e-13,3;UBERON:0010056,1.09e-13,3;UBERON:0000161,2.31e-12,36;UBERON:0000165,1.78e-11,29;UBERON:0000930,1.78e-11,29;UBERON:0007029,4.15e-11,1;UBERON:0001736,7.46e-11,1;UBERON:0006298,7.46e-11,1;UBERON:0000014,2.15e-10,4;UBERON:0001004,3.65e-09,74;UBERON:0003408,4.03e-09,10;UBERON:0003102,3.75e-08,99;UBERON:0004119,6.23e-08,160;UBERON:0000925,6.23e-08,160;UBERON:0006595,6.23e-08,160;UBERON:0000153,7.09e-07,62;UBERON:0007811,7.09e-07,62 | |||
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|short_description=p@chr13:73636073..73636084,+ | |||
}} |
Revision as of 02:44, 11 September 2013
Short description: | p@chr13:73636073..73636084, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:73636073..73636084, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.40e-17 | 5 |
protein secreting cell | 9.37e-15 | 6 |
acinar cell of salivary gland | 1.24e-13 | 3 |
endo-epithelial cell | 1.71e-13 | 42 |
glandular epithelial cell | 5.05e-10 | 9 |
endodermal cell | 1.67e-09 | 58 |
respiratory epithelial cell | 4.81e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
oral opening | 2.95e-15 | 22 |
saliva-secreting gland | 7.75e-15 | 6 |
gland of oral region | 7.75e-15 | 6 |
gland of foregut | 7.75e-15 | 6 |
oral gland | 7.75e-15 | 6 |
oral cavity | 7.75e-15 | 6 |
tongue | 1.09e-13 | 3 |
gustatory system | 1.09e-13 | 3 |
future tongue | 1.09e-13 | 3 |
orifice | 2.31e-12 | 36 |
mouth | 1.78e-11 | 29 |
stomodeum | 1.78e-11 | 29 |
surface | 4.15e-11 | 1 |
submandibular gland | 7.46e-11 | 1 |
submandibular gland primordium | 7.46e-11 | 1 |
zone of skin | 2.15e-10 | 4 |
respiratory system | 3.65e-09 | 74 |
gland of gut | 4.03e-09 | 10 |
surface structure | 3.75e-08 | 99 |
endoderm-derived structure | 6.23e-08 | 160 |
endoderm | 6.23e-08 | 160 |
presumptive endoderm | 6.23e-08 | 160 |
anterior region of body | 7.09e-07 | 62 |
craniocervical region | 7.09e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.77e-10 | 1 |
keratoacanthoma | 1.77e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.