FFCP PHASE1:Hg19::chr13:75900938..75900949,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9882|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=19165|TSSclassifier=N|UniProt=|association_with_transcript=-413bp_to_AY211910_5end|coexpression_cluster_id=C18|description=CAGE_peak_13_at_TBC1D4_5end|id=chr13:75900938..75900949,-|ontology_enrichment_celltype=CL:0000084!8.98e-21!25;CL:0000827!8.98e-21!25;CL:0000791!2.42e-18!18;CL:0000789!2.42e-18!18;CL:0002420!2.42e-18!18;CL:0002419!2.42e-18!18;CL:0000790!2.42e-18!18;CL:0002139!5.64e-15!24;CL:0000838!2.87e-14!52;CL:0000542!7.97e-14!53;CL:0000051!7.97e-14!53;CL:0000115!1.82e-12!35;CL:0000625!1.05e-11!11;CL:0000071!3.68e-11!18;CL:0002546!3.68e-11!18;CL:0000624!7.56e-10!6;CL:0002078!1.20e-09!44;CL:0002087!8.66e-09!119;CL:0000213!2.21e-08!57;CL:0000215!2.21e-08!57;CL:0000738!2.41e-08!140;CL:1000413!3.35e-08!9;CL:0002031!8.99e-08!124;CL:0000037!1.51e-07!172;CL:0000566!1.51e-07!172;CL:0000988!6.02e-07!182;CL:0002032!7.09e-07!165;CL:0000837!7.09e-07!165|ontology_enrichment_celltype_v019=CL:0000791;1.62e-31;18!CL:0000789;1.62e-31;18!CL:0002419;1.62e-31;18!CL:0000624;4.99e-30;6!CL:0000084;2.95e-26;25!CL:0000898;5.56e-16;3!CL:0000815;1.40e-11;2!CL:0000792;1.40e-11;2!CL:0002677;1.40e-11;2!CL:0000625;4.48e-11;11!CL:0002188;3.49e-09;5|ontology_enrichment_celltype_v019_2=CL:0000791,9.72e-32,18;CL:0000789,9.72e-32,18;CL:0002420,9.72e-32,18;CL:0002419,9.72e-32,18;CL:0000790,9.72e-32,18;CL:0000624,2.50e-30,6;CL:0000084,2.59e-26,25;CL:0000827,2.59e-26,25;CL:0000898,4.02e-16,3;CL:0000815,1.33e-11,2;CL:0000792,1.33e-11,2;CL:0002677,1.33e-11,2;CL:0000838,2.30e-11,52;CL:0000625,4.17e-11,11;CL:0000542,4.19e-11,53;CL:0000051,4.19e-11,53;CL:0002188,4.99e-09,5|ontology_enrichment_development_v019=CL:0000790;1.62e-31;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!3.68e-11!18;UBERON:0004638!3.68e-11!18;UBERON:0004852!3.68e-11!18;UBERON:0000487!2.01e-08!22;UBERON:0003915!3.35e-08!9;UBERON:0004700!3.35e-08!9;UBERON:0001917!3.35e-08!9;UBERON:0000178!7.51e-08!15;UBERON:0000179!7.51e-08!15;UBERON:0000463!7.51e-08!15;UBERON:0006914!5.69e-07!25|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0.485168122375632,0,0.411167888021826,0,0,0,0.236482229888585,0,0,2.70852973188684,0,0,0.224723484445085,0,0,0.639337125799041,0,0,0.852449501065388,0,0,0,0,0,0.217188844705117,0,0,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,2.360517241366,1.96505381374582,3.08402248499264,2.17342444007882,3.2592226663359,2.36723902867367,1.94826728407911,1.55974639639243,3.53527088969805,3.32300841875432,6.22848886659536,5.12365278902701,7.28332346335318,1.15106533222573,1.65810010671509,1.44901542867526,2.37258501059297,1.87278579662799,2.09071047609954,1.24640276967323,1.53288197440768,1.03088233644789,1.51811815211702,1.27426165729639,0.651083453856419,0,0.752875595388864,1.53583933385302,2.49861453104692,1.18388626022008,3.28451198768419,0.80642697289893,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0.596287222100115,0.860234595106124,0,1.13061588384802,0.419499436209906,0.275118041940067,0.208994966536811,0.775250277507987,0,0.66944122552934,0.402829317109147,1.52054421143703,0,0.367663080345869,0.81014194788176,0.982297011124877,0.22452937262617,0.788280363383256,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.433099343283221,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.82707210449155,0,0.74709290462411,0,0,0.30239029332968,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,1.53084334748864,1.0795795805107,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,1.19115887728894,1.23408681925858,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0,0.0711418433484141,0.956557636372934,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9882 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=19165 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-413bp_to_AY211910_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_13_at_TBC1D4_5end | |||
|id=chr13:75900938..75900949,- | |||
|ontology_enrichment_celltype=CL:0000084!8.98e-21!25;CL:0000827!8.98e-21!25;CL:0000791!2.42e-18!18;CL:0000789!2.42e-18!18;CL:0002420!2.42e-18!18;CL:0002419!2.42e-18!18;CL:0000790!2.42e-18!18;CL:0002139!5.64e-15!24;CL:0000838!2.87e-14!52;CL:0000542!7.97e-14!53;CL:0000051!7.97e-14!53;CL:0000115!1.82e-12!35;CL:0000625!1.05e-11!11;CL:0000071!3.68e-11!18;CL:0002546!3.68e-11!18;CL:0000624!7.56e-10!6;CL:0002078!1.20e-09!44;CL:0002087!8.66e-09!119;CL:0000213!2.21e-08!57;CL:0000215!2.21e-08!57;CL:0000738!2.41e-08!140;CL:1000413!3.35e-08!9;CL:0002031!8.99e-08!124;CL:0000037!1.51e-07!172;CL:0000566!1.51e-07!172;CL:0000988!6.02e-07!182;CL:0002032!7.09e-07!165;CL:0000837!7.09e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.62e-31;18!CL:0000789;1.62e-31;18!CL:0002419;1.62e-31;18!CL:0000624;4.99e-30;6!CL:0000084;2.95e-26;25!CL:0000898;5.56e-16;3!CL:0000815;1.40e-11;2!CL:0000792;1.40e-11;2!CL:0002677;1.40e-11;2!CL:0000625;4.48e-11;11!CL:0002188;3.49e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.72e-32,18;CL:0000789,9.72e-32,18;CL:0002420,9.72e-32,18;CL:0002419,9.72e-32,18;CL:0000790,9.72e-32,18;CL:0000624,2.50e-30,6;CL:0000084,2.59e-26,25;CL:0000827,2.59e-26,25;CL:0000898,4.02e-16,3;CL:0000815,1.33e-11,2;CL:0000792,1.33e-11,2;CL:0002677,1.33e-11,2;CL:0000838,2.30e-11,52;CL:0000625,4.17e-11,11;CL:0000542,4.19e-11,53;CL:0000051,4.19e-11,53;CL:0002188,4.99e-09,5 | |||
|ontology_enrichment_development_v019=CL:0000790;1.62e-31;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.68e-11!18;UBERON:0004638!3.68e-11!18;UBERON:0004852!3.68e-11!18;UBERON:0000487!2.01e-08!22;UBERON:0003915!3.35e-08!9;UBERON:0004700!3.35e-08!9;UBERON:0001917!3.35e-08!9;UBERON:0000178!7.51e-08!15;UBERON:0000179!7.51e-08!15;UBERON:0000463!7.51e-08!15;UBERON:0006914!5.69e-07!25 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p13@TBC1D4 | |||
}} |
Revision as of 02:46, 11 September 2013
Short description: | p13@TBC1D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_TBC1D4_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -413bp_to_AY211910_5end |
EntrezGene: | TBC1D4 |
HGNC: | 19165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.72e-32 | 18 |
alpha-beta T cell | 9.72e-32 | 18 |
immature T cell | 9.72e-32 | 18 |
mature T cell | 9.72e-32 | 18 |
immature alpha-beta T cell | 9.72e-32 | 18 |
CD4-positive, alpha-beta T cell | 2.50e-30 | 6 |
T cell | 2.59e-26 | 25 |
pro-T cell | 2.59e-26 | 25 |
naive T cell | 4.02e-16 | 3 |
regulatory T cell | 1.33e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.33e-11 | 2 |
naive regulatory T cell | 1.33e-11 | 2 |
lymphoid lineage restricted progenitor cell | 2.30e-11 | 52 |
CD8-positive, alpha-beta T cell | 4.17e-11 | 11 |
lymphocyte | 4.19e-11 | 53 |
common lymphoid progenitor | 4.19e-11 | 53 |
glomerular endothelial cell | 4.99e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.