FFCP PHASE1:Hg19::chr13:76209973..76210013,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4008|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6646|TSSclassifier=S|UniProt=|association_with_transcript=27bp_to_ENST00000533305_5end|coexpression_cluster_id=C1189|description=CAGE_peak_13_at_LMO7_5end|id=chr13:76209973..76210013,+|ontology_enrichment_celltype=CL:0000057!1.09e-14!75;CL:0000055!1.63e-13!180;CL:0002620!3.31e-09!23|ontology_enrichment_celltype_v019=CL:0002620;8.98e-19;23!CL:0000056;1.41e-07;4!CL:0002580;6.69e-07;3|ontology_enrichment_celltype_v019_2=CL:0002620,7.03e-19,23;CL:0000057,7.65e-18,76;CL:0000515,7.84e-08,4;CL:0002580,7.37e-07,3|ontology_enrichment_development_v019=CL:0000515;1.41e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;7.74e-10;5!DOID:450;7.74e-10;5!DOID:66;7.74e-10;5!DOID:423;7.74e-10;5!DOID:0080000;7.74e-10;5!DOID:11722;7.74e-10;5|ontology_enrichment_disease_v019_2=DOID:17,7.80e-10,5;DOID:450,7.80e-10,5;DOID:66,7.80e-10,5;DOID:423,7.80e-10,5;DOID:0080000,7.80e-10,5;DOID:11722,7.80e-10,5|ontology_enrichment_uberon=UBERON:0003102!7.20e-07!95|ontology_enrichment_uberon_v019=UBERON:0004457;3.69e-08;9!UBERON:0000042;3.69e-08;9!UBERON:0002199;6.48e-08;46!UBERON:0002416;6.48e-08;46!UBERON:0002097;2.26e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.18e-10,46;UBERON:0002416,2.18e-10,46;UBERON:0002097,9.47e-10,41;UBERON:0003102,1.64e-08,99|phase1_expression=1.63510541343501,1.2846031433459,1.12763523276777,1.0007329835313,1.78784437770915,0,2.53299878168311,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0.408001382488506,0,0.286235987131057,0,0.251085279189606,0.152826811495903,0.164201178899891,0.236132343941038,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.393419540227666,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0.541607727530031,0,0,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,3.61439152384566,2.50668955317945,1.88300474649071,0,0.973269740605272,0.0945348171640679,0,0.087834785693126,0.72038491523742,0,0,0,0,0,0,0.571994910780128,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,3.16576279161449,2.78059279707759,1.14734648299525,0.709336764396714,3.36406560085384,0,0.24666754841716,0,0.269421344139376,0.326923806226917,0,0,0.468642863667593,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,1.48360157567134,0.910161361938026,0,0.336672227908132,0.375355559615893,0.554128230968366,1.75591048352335,1.83892677479412,0.751190294532984,0.680593098960126,6.27863724911017,2.56268866582281,1.48352330811693,3.60109315301283,3.29768093563004,6.69865404118636,5.58350568994769,5.06328996723799,7.3077753870899,4.03894038790583,2.66944706062668,1.77810662500693,5.32514388774922,3.02256294682921,4.57813599238317,0.386521706326594,0.545492241181669,0.860413786167011,0,0.132529768321485,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0.241011029883482,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0,0.648119116109707,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,1.34385702559088,2.26840155587818,0.53735113621709,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0.22001485746285,0.904902010304444,0,0.845302752556,2.92531928243358,0,0.771622122786426,0,0,0,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,1.91699884393266,1.14861935834114,2.85273810081437,1.88215698667853,2.67119219315498,2.50685348535854,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,1.08506009479894,1.66376689224646,4.10386674233472,2.20783381047509,3.86566669475954,0.601892199455438,0,1.03473071292505,6.64225598535437,2.58116835958384,2.25897397617015,0,0,0,0.215714200818617,0,0.303127571446259,0,0,2.48107807818777,14.8858114089421,3.36792113319688,0.512556597022804,1.53512174720011,1.60853921143608,2.96836132889982,0.462629081407967,1.06537035187876,0.739144404124282,0,0.813472649219715,0.604297247958111,0.802025881213139,0,1.37777337797528,1.82091168006717,1.57349297951309,0.451199612907412,0.539107359730903,0,0,0.105551628892876,0,0.170093705276516,1.0795795805107,1.54227252690289,0.270946437543853,0.501689773854853,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.824328093181778,0,0.165018999841176,0,0,1.6068392984416,0,0.154048617114644,0,0.137836572484531,0,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.255225424989168,0,0.929691098594572,3.46293581513704,0.6970372701606,0,0,0.869932992075073,0.55597265731176,0.572499546967965,0,0.316379424718726,0.190630193923825,0.511795582622668,0,0.636406495851874,0,0.899362287916574,0.274537029736055,0.589062011728432,0.202182481573316,0,0,0,0,0,2.729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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=27bp_to_ENST00000533305_5end | |||
|coexpression_cluster_id=C1189 | |||
|description=CAGE_peak_13_at_LMO7_5end | |||
|id=chr13:76209973..76210013,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.09e-14!75;CL:0000055!1.63e-13!180;CL:0002620!3.31e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.98e-19;23!CL:0000056;1.41e-07;4!CL:0002580;6.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,7.03e-19,23;CL:0000057,7.65e-18,76;CL:0000515,7.84e-08,4;CL:0002580,7.37e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000515;1.41e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.74e-10;5!DOID:450;7.74e-10;5!DOID:66;7.74e-10;5!DOID:423;7.74e-10;5!DOID:0080000;7.74e-10;5!DOID:11722;7.74e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.80e-10,5;DOID:450,7.80e-10,5;DOID:66,7.80e-10,5;DOID:423,7.80e-10,5;DOID:0080000,7.80e-10,5;DOID:11722,7.80e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!7.20e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.69e-08;9!UBERON:0000042;3.69e-08;9!UBERON:0002199;6.48e-08;46!UBERON:0002416;6.48e-08;46!UBERON:0002097;2.26e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.18e-10,46;UBERON:0002416,2.18e-10,46;UBERON:0002097,9.47e-10,41;UBERON:0003102,1.64e-08,99 | |||
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| |||
|short_description=p13@LMO7 | |||
}} |
Revision as of 02:47, 11 September 2013
Short description: | p13@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_LMO7_5end |
Coexpression cluster: | C1189_Preadipocyte_Fibroblast_Ewing_mesodermal_Adipocyte_Smooth_osteoclastoma |
Association with transcript: | 27bp_to_ENST00000533305_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 7.03e-19 | 23 |
fibroblast | 7.65e-18 | 76 |
skeletal muscle myoblast | 7.84e-08 | 4 |
preadipocyte of the breast | 7.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 2.18e-10 | 46 |
integumental system | 2.18e-10 | 46 |
skin of body | 9.47e-10 | 41 |
surface structure | 1.64e-08 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.80e-10 | 5 |
myotonic disease | 7.80e-10 | 5 |
muscle tissue disease | 7.80e-10 | 5 |
myopathy | 7.80e-10 | 5 |
muscular disease | 7.80e-10 | 5 |
myotonic dystrophy | 7.80e-10 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.