FFCP PHASE1:Hg19::chr14:100594957..100594983,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51466|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20234|TSSclassifier=S|UniProt=Q9UI08|association_with_transcript=97bp_to_AL133642_5end|description=CAGE_peak_16_at_EVL_5end|id=chr14:100594957..100594983,+|ontology_enrichment_celltype=CL:0000838!2.08e-14!52;CL:0000542!9.94e-14!53;CL:0000051!9.94e-14!53;CL:0000791!5.60e-10!18;CL:0000789!5.60e-10!18;CL:0002420!5.60e-10!18;CL:0002419!5.60e-10!18;CL:0000790!5.60e-10!18;CL:0000084!3.51e-09!25;CL:0000827!3.51e-09!25;CL:0002087!2.25e-07!119|ontology_enrichment_celltype_v019=CL:0000791;6.04e-19;18!CL:0000789;6.04e-19;18!CL:0002419;6.04e-19;18!CL:0000084;6.45e-17;25!CL:0000542;1.05e-14;53!CL:0000624;1.77e-12;6!CL:0000236;7.84e-11;13!CL:0000625;3.05e-10;11!CL:0000623;2.11e-07;3!CL:0000898;4.16e-07;3!CL:0000226;7.68e-07;3!CL:0000842;7.68e-07;3|ontology_enrichment_celltype_v019_2=CL:0000838,3.09e-23,52;CL:0000542,1.22e-22,53;CL:0000051,1.22e-22,53;CL:0000791,2.29e-19,18;CL:0000789,2.29e-19,18;CL:0002420,2.29e-19,18;CL:0002419,2.29e-19,18;CL:0000790,2.29e-19,18;CL:0000084,3.67e-17,25;CL:0000827,3.67e-17,25;CL:0002087,8.53e-17,115;CL:0000738,2.13e-14,136;CL:0000624,6.99e-13,6;CL:0002031,1.38e-12,120;CL:0000037,5.27e-11,168;CL:0000988,1.44e-10,177;CL:0000625,2.34e-10,11;CL:0000236,4.17e-10,14;CL:0002032,7.10e-09,161;CL:0000837,7.10e-09,161;CL:0000623,2.35e-07,3;CL:0000825,2.35e-07,3;CL:0000898,3.09e-07,3;CL:0000226,5.85e-07,3;CL:0000842,5.85e-07,3|ontology_enrichment_development_v019=CL:0000790;6.04e-19;18!CL:0000051;1.05e-14;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.07e-10!115;UBERON:0001017!2.27e-07!82;UBERON:0005743!2.30e-07!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.363356758541113,0.856402095563933,0.140954404095971,0,0,0,2.53299878168311,0.631719873426831,0.522371256399677,0,0,0,0.527533956456907,0.37129905888014,0.662794751455832,0.672325146451775,0,0,0,0.492484232307152,0.816002764977012,0,0,0.273748850145768,0.376627918784408,0.687720651731561,0.328402357799783,0.0787107813136792,0.393364276848904,1.15148819429164,0.619264493264304,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,0.553995408531877,0,0.651032612147555,0.447830948479849,0.647787332037959,0.515151135268373,0.290796477559129,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0.368277635987565,0,1.69004229049553,1.4882300997553,0,0,0.150176892841506,0,0.285012743741249,1.9891667719909,1.0959849225878,1.75996244461323,2.18455444504853,0,0.426730222566507,2.00197993518006,2.29900975981793,1.98313461835459,2.86216126360609,1.1384259382189,1.76171156811282,1.52909291250092,0,0,0.526768169550154,1.96709770113833,2.75107533924415,3.28962398399215,3.8452893939856,2.28145586643513,3.31413464014313,1.94826728407911,4.01077644786625,4.71369451959739,4.2091439970888,3.5204502289452,2.68991771423918,2.73124629875744,2.30213066445147,3.31620021343018,2.60822777161547,3.55887751588945,3.47803076516627,1.04535523804977,2.60611488204402,1.91610246800961,2.40539211837841,1.51811815211702,0.95569624297229,1.95325036156926,1.90090408889675,1.05402583354441,1.66382594500744,0,0.947109008176067,2.46338399076314,1.20964045934839,2.13952156626806,2.75166367377318,0,0,0,0.361439152384566,0,0.289693037921647,0,0.973269740605272,0.283604451492204,0.443458794925128,0.263504357079378,0.458426764241994,0.364295288292542,0,0.97364218096405,1.56716763569341,4.65352861816028,0,0,0,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0.134710672069688,0.163461903113459,0.454072282934794,1.72852777344,0.468642863667593,0.624320153660641,0,0.448346041655403,0.23486899728753,0,0,0.204154171254893,0.491337269247072,0.309977343527296,0,0.741800787835671,0,0,0.505008341862199,0.125118519871964,0,0,0.919463387397059,0.150238058906597,0,0.179389635688862,0.213557388818567,0.423863802319124,0,0.103052529238439,0.515281080091258,0,0,0.292311015483596,0,0.184099797284599,0.484938170456436,0.355009592516614,0.201504196455281,0.169560592310488,0.193260853163297,0.272746120590835,0,0.487894824518382,0.265059536642971,0.232387885739037,0.518305275076852,0.504641701751257,0,0,1.28648187638577,1.38134921352481,0,0,0.354920400119532,0.168584690078102,0,0,0,0,0,0,0,0,2.80483547606892,0.8231480226628,0,0,1.96565443335525,2.36315962672562,3.09024169590255,0.122988438543114,0.171567810298526,0.219500570817251,0,0,0,0.325808305310325,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0,0.190254152234598,2.37061319387782,3.43394464837949,0.738651018262192,0.936017060556951,1.93220510975347,0.9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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51466 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20234 | |||
|TSSclassifier=S | |||
|UniProt=Q9UI08 | |||
|association_with_transcript=97bp_to_AL133642_5end | |||
|description=CAGE_peak_16_at_EVL_5end | |||
|id=chr14:100594957..100594983,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.08e-14!52;CL:0000542!9.94e-14!53;CL:0000051!9.94e-14!53;CL:0000791!5.60e-10!18;CL:0000789!5.60e-10!18;CL:0002420!5.60e-10!18;CL:0002419!5.60e-10!18;CL:0000790!5.60e-10!18;CL:0000084!3.51e-09!25;CL:0000827!3.51e-09!25;CL:0002087!2.25e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.04e-19;18!CL:0000789;6.04e-19;18!CL:0002419;6.04e-19;18!CL:0000084;6.45e-17;25!CL:0000542;1.05e-14;53!CL:0000624;1.77e-12;6!CL:0000236;7.84e-11;13!CL:0000625;3.05e-10;11!CL:0000623;2.11e-07;3!CL:0000898;4.16e-07;3!CL:0000226;7.68e-07;3!CL:0000842;7.68e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.09e-23,52;CL:0000542,1.22e-22,53;CL:0000051,1.22e-22,53;CL:0000791,2.29e-19,18;CL:0000789,2.29e-19,18;CL:0002420,2.29e-19,18;CL:0002419,2.29e-19,18;CL:0000790,2.29e-19,18;CL:0000084,3.67e-17,25;CL:0000827,3.67e-17,25;CL:0002087,8.53e-17,115;CL:0000738,2.13e-14,136;CL:0000624,6.99e-13,6;CL:0002031,1.38e-12,120;CL:0000037,5.27e-11,168;CL:0000988,1.44e-10,177;CL:0000625,2.34e-10,11;CL:0000236,4.17e-10,14;CL:0002032,7.10e-09,161;CL:0000837,7.10e-09,161;CL:0000623,2.35e-07,3;CL:0000825,2.35e-07,3;CL:0000898,3.09e-07,3;CL:0000226,5.85e-07,3;CL:0000842,5.85e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.04e-19;18!CL:0000051;1.05e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.07e-10!115;UBERON:0001017!2.27e-07!82;UBERON:0005743!2.30e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p16@EVL | |||
}} |
Revision as of 03:10, 11 September 2013
Short description: | p16@EVL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_EVL_5end |
Coexpression cluster: | NA |
Association with transcript: | 97bp_to_AL133642_5end |
EntrezGene: | EVL |
HGNC: | 20234 |
UniProt: | Q9UI08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.09e-23 | 52 |
lymphocyte | 1.22e-22 | 53 |
common lymphoid progenitor | 1.22e-22 | 53 |
mature alpha-beta T cell | 2.29e-19 | 18 |
alpha-beta T cell | 2.29e-19 | 18 |
immature T cell | 2.29e-19 | 18 |
mature T cell | 2.29e-19 | 18 |
immature alpha-beta T cell | 2.29e-19 | 18 |
T cell | 3.67e-17 | 25 |
pro-T cell | 3.67e-17 | 25 |
nongranular leukocyte | 8.53e-17 | 115 |
leukocyte | 2.13e-14 | 136 |
CD4-positive, alpha-beta T cell | 6.99e-13 | 6 |
hematopoietic lineage restricted progenitor cell | 1.38e-12 | 120 |
hematopoietic stem cell | 5.27e-11 | 168 |
hematopoietic cell | 1.44e-10 | 177 |
CD8-positive, alpha-beta T cell | 2.34e-10 | 11 |
B cell | 4.17e-10 | 14 |
hematopoietic oligopotent progenitor cell | 7.10e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.10e-09 | 161 |
natural killer cell | 2.35e-07 | 3 |
pro-NK cell | 2.35e-07 | 3 |
naive T cell | 3.09e-07 | 3 |
single nucleate cell | 5.85e-07 | 3 |
mononuclear cell | 5.85e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.