FFCP PHASE1:Hg19::chr14:30396986..30396998,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5587|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9407|TSSclassifier=S|UniProt=Q15139|association_with_transcript=-38bp_to_ENST00000331968_5end|description=CAGE_peak_4_at_PRKD1_5end|id=chr14:30396986..30396998,-|ontology_enrichment_celltype=CL:0000055!1.34e-10!180;CL:0000057!9.35e-10!75;CL:0002620!1.16e-09!23|ontology_enrichment_celltype_v019=CL:0002620;2.46e-10;23!CL:0002580;9.98e-09;3!CL:0002615;3.72e-08;3!CL:0002334;2.58e-07;12|ontology_enrichment_celltype_v019_2=CL:0000057,6.14e-11,76;CL:0002620,2.14e-10,23;CL:0002580,1.22e-08,3;CL:0002615,1.25e-08,3;CL:0000136,1.08e-07,15;CL:0002334,2.13e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.03e-20!82;UBERON:0005743!3.63e-20!86;UBERON:0000475!4.32e-20!365;UBERON:0001049!9.38e-20!57;UBERON:0005068!9.38e-20!57;UBERON:0006241!9.38e-20!57;UBERON:0007135!9.38e-20!57;UBERON:0000073!6.74e-19!94;UBERON:0001016!6.74e-19!94;UBERON:0007023!3.20e-18!115;UBERON:0003075!4.81e-18!86;UBERON:0007284!4.81e-18!86;UBERON:0000955!1.99e-17!69;UBERON:0006238!1.99e-17!69;UBERON:0002616!2.36e-17!59;UBERON:0002346!1.01e-16!90;UBERON:0000033!2.24e-13!123;UBERON:0003080!2.32e-13!42;UBERON:0000153!4.22e-13!129;UBERON:0007811!4.22e-13!129;UBERON:0004121!4.39e-13!169;UBERON:0002780!1.09e-12!41;UBERON:0001890!1.09e-12!41;UBERON:0006240!1.09e-12!41;UBERON:0000924!1.91e-12!173;UBERON:0006601!1.91e-12!173;UBERON:0002020!1.00e-10!34;UBERON:0003528!1.00e-10!34;UBERON:0001893!1.49e-10!34;UBERON:0000119!1.73e-10!312;UBERON:0002791!2.22e-10!33;UBERON:0003056!3.91e-10!61;UBERON:0000483!3.99e-10!309;UBERON:0001869!8.87e-10!32;UBERON:0000477!4.39e-09!286;UBERON:0004111!8.30e-09!241;UBERON:0000025!1.73e-08!194;UBERON:0003076!7.93e-08!15;UBERON:0003057!7.93e-08!15;UBERON:0000481!2.78e-07!347;UBERON:0000064!3.88e-07!219;UBERON:0000956!7.27e-07!25;UBERON:0000203!7.27e-07!25|ontology_enrichment_uberon_v019=UBERON:0003688;2.22e-10;6!UBERON:0002358;2.22e-10;6!UBERON:0003684;2.22e-10;6!UBERON:0001178;2.22e-10;6!UBERON:0000310;3.47e-09;10!UBERON:0001443;2.86e-08;11!UBERON:0004457;8.98e-07;9!UBERON:0000042;8.98e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.17e-11,6;UBERON:0002358,6.17e-11,6;UBERON:0003684,6.17e-11,6;UBERON:0001178,6.17e-11,6;UBERON:0000310,3.65e-09,10;UBERON:0001443,2.99e-08,11;UBERON:0002097,3.82e-07,41|phase1_expression=2.36181893051724,2.99740733447376,1.69145284915165,3.00219895059391,1.78784437770915,2.61701557230111,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.369363174230364,0.204000691244253,0.626909442956176,0.286235987131057,0.684372125364421,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,7.31420598941885,0,0.767175371061182,1.0843174571537,0,0.724232594804119,0.795285947051099,0.973269740605272,0.0945348171640679,0.221729397462564,0.351339142772504,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0.419499436209906,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0.81014194788176,0,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,1.49091585508596,0.25326102332916,0.397227542439656,0.860509862246441,0,1.12135520028461,0,0,0.933633106199299,0.134710672069688,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0.570471821544449,1.64393548606981,0.822041490506354,1.29498355494505,1.12360645361799,0,0.122834317311768,0.206651562351531,1.18800285728205,0.989067717114227,0,0,0,0.375355559615893,0,0,1.22595118319608,0.751190294532984,0.453728732640084,1.4351170855109,0.85422955527427,0.423863802319124,1.20036438433761,0.515262646192195,1.8034837803194,0.558350568994769,1.18143432568886,1.75386609290158,2.01947019395292,0.552299391853796,0.161646056818812,2.13005755509969,1.30977727695932,0.508681776931463,0,0,0,0.243947412259191,0,0.348581828608555,0,0.252320850875628,0,0,3.21620469096443,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.469634776943287,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.190493682876507,0,1.17217447210047,1.71072446022705,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0.258543431515556,0,0.845302752556,0,0,0,0,0.266422179016099,1.00084595560703,0,0,0,0.355391948742546,0,0.904318131178758,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0.410952645100767,1.96967059563885,0,0,0,0,1.27047312111232,0,0.773288812777695,0.335032530668698,2.55175500661265,0,0,0,0.49076596687656,0,0,1.03985430765404,0.892144943985809,0.788512075169673,0,0,0,0,0.664225598535437,0.184369168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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5587 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9407 | |||
|TSSclassifier=S | |||
|UniProt=Q15139 | |||
|association_with_transcript=-38bp_to_ENST00000331968_5end | |||
|description=CAGE_peak_4_at_PRKD1_5end | |||
|id=chr14:30396986..30396998,- | |||
|ontology_enrichment_celltype=CL:0000055!1.34e-10!180;CL:0000057!9.35e-10!75;CL:0002620!1.16e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.46e-10;23!CL:0002580;9.98e-09;3!CL:0002615;3.72e-08;3!CL:0002334;2.58e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.14e-11,76;CL:0002620,2.14e-10,23;CL:0002580,1.22e-08,3;CL:0002615,1.25e-08,3;CL:0000136,1.08e-07,15;CL:0002334,2.13e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.03e-20!82;UBERON:0005743!3.63e-20!86;UBERON:0000475!4.32e-20!365;UBERON:0001049!9.38e-20!57;UBERON:0005068!9.38e-20!57;UBERON:0006241!9.38e-20!57;UBERON:0007135!9.38e-20!57;UBERON:0000073!6.74e-19!94;UBERON:0001016!6.74e-19!94;UBERON:0007023!3.20e-18!115;UBERON:0003075!4.81e-18!86;UBERON:0007284!4.81e-18!86;UBERON:0000955!1.99e-17!69;UBERON:0006238!1.99e-17!69;UBERON:0002616!2.36e-17!59;UBERON:0002346!1.01e-16!90;UBERON:0000033!2.24e-13!123;UBERON:0003080!2.32e-13!42;UBERON:0000153!4.22e-13!129;UBERON:0007811!4.22e-13!129;UBERON:0004121!4.39e-13!169;UBERON:0002780!1.09e-12!41;UBERON:0001890!1.09e-12!41;UBERON:0006240!1.09e-12!41;UBERON:0000924!1.91e-12!173;UBERON:0006601!1.91e-12!173;UBERON:0002020!1.00e-10!34;UBERON:0003528!1.00e-10!34;UBERON:0001893!1.49e-10!34;UBERON:0000119!1.73e-10!312;UBERON:0002791!2.22e-10!33;UBERON:0003056!3.91e-10!61;UBERON:0000483!3.99e-10!309;UBERON:0001869!8.87e-10!32;UBERON:0000477!4.39e-09!286;UBERON:0004111!8.30e-09!241;UBERON:0000025!1.73e-08!194;UBERON:0003076!7.93e-08!15;UBERON:0003057!7.93e-08!15;UBERON:0000481!2.78e-07!347;UBERON:0000064!3.88e-07!219;UBERON:0000956!7.27e-07!25;UBERON:0000203!7.27e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.22e-10;6!UBERON:0002358;2.22e-10;6!UBERON:0003684;2.22e-10;6!UBERON:0001178;2.22e-10;6!UBERON:0000310;3.47e-09;10!UBERON:0001443;2.86e-08;11!UBERON:0004457;8.98e-07;9!UBERON:0000042;8.98e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.17e-11,6;UBERON:0002358,6.17e-11,6;UBERON:0003684,6.17e-11,6;UBERON:0001178,6.17e-11,6;UBERON:0000310,3.65e-09,10;UBERON:0001443,2.99e-08,11;UBERON:0002097,3.82e-07,41 | |||
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| |||
|short_description=p4@PRKD1 | |||
}} |
Revision as of 04:16, 11 September 2013
Short description: | p4@PRKD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PRKD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_ENST00000331968_5end |
EntrezGene: | PRKD1 |
HGNC: | 9407 |
UniProt: | Q15139 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.14e-11 | 76 |
skin fibroblast | 2.14e-10 | 23 |
preadipocyte of the breast | 1.22e-08 | 3 |
adipocyte of omentum tissue | 1.25e-08 | 3 |
fat cell | 1.08e-07 | 15 |
preadipocyte | 2.13e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.17e-11 | 6 |
peritoneum | 6.17e-11 | 6 |
abdominal cavity | 6.17e-11 | 6 |
visceral peritoneum | 6.17e-11 | 6 |
breast | 3.65e-09 | 10 |
chest | 2.99e-08 | 11 |
skin of body | 3.82e-07 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.