FFCP PHASE1:Hg19::chr14:65406411..65406422,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3446|description=CAGE_peak_at_chr14:65406411..65406422,-|id=chr14:65406411..65406422,-|ontology_enrichment_celltype=CL:0000223!1.93e-18!59;CL:0002076!2.97e-12!43;CL:0002621!7.41e-11!3;CL:0002231!9.73e-11!3;CL:0002251!3.12e-09!21;CL:0000066!4.82e-09!254;CL:0000181!1.90e-07!12;CL:0000417!1.90e-07!12;CL:0000668!1.90e-07!12;CL:0000414!1.90e-07!12;CL:0000412!1.90e-07!12;CL:0000182!1.90e-07!12|ontology_enrichment_celltype_v019=CL:0002553;6.21e-15;1|ontology_enrichment_celltype_v019_2=CL:0002553,6.22e-15,1|ontology_enrichment_development_v019=UBERON:0006242;7.63e-15;1!UBERON:0009497;9.05e-10;13!UBERON:0001041;2.57e-07;30|ontology_enrichment_disease=DOID:305!1.29e-10!106|ontology_enrichment_disease_v019=DOID:3151;9.36e-15;1!DOID:3149;9.36e-15;1!DOID:1749;4.94e-09;14!DOID:3451;5.01e-08;2!DOID:4159;5.01e-08;2!DOID:0060122;5.01e-08;2!DOID:3493;7.03e-08;2|ontology_enrichment_disease_v019_2=DOID:3151,9.36e-15,1;DOID:3149,9.36e-15,1;DOID:1749,5.53e-09,14;DOID:3451,5.02e-08,2;DOID:4159,5.02e-08,2;DOID:0060122,5.02e-08,2;DOID:3493,5.37e-08,2;DOID:305,3.55e-07,106|ontology_enrichment_uberon=UBERON:0001007!3.82e-23!155;UBERON:0001555!3.82e-23!155;UBERON:0007026!3.82e-23!155;UBERON:0004119!7.97e-22!169;UBERON:0000925!7.97e-22!169;UBERON:0006595!7.97e-22!169;UBERON:0004921!4.67e-18!129;UBERON:0004185!4.67e-18!129;UBERON:0000161!1.31e-15!35;UBERON:0003929!1.15e-14!54;UBERON:0000077!4.62e-14!130;UBERON:0005911!2.80e-12!82;UBERON:0000166!2.05e-11!21;UBERON:0001949!7.41e-11!3;UBERON:0003101!9.35e-11!22;UBERON:0000079!9.35e-11!22;UBERON:0009497!2.53e-10!25;UBERON:0000015!2.53e-10!25;UBERON:0002423!2.53e-10!25;UBERON:0006235!2.53e-10!25;UBERON:0004161!2.53e-10!25;UBERON:0001041!1.93e-09!98;UBERON:0009854!5.75e-09!23;UBERON:0000165!3.69e-08!28;UBERON:0000930!3.69e-08!28;UBERON:0000466!4.61e-08!126;UBERON:0009856!9.04e-08!26;UBERON:0003135!1.96e-07!11;UBERON:0008835!2.75e-07!22;UBERON:0003894!2.75e-07!22;UBERON:0001004!3.59e-07!72;UBERON:0000473!8.72e-07!8|ontology_enrichment_uberon_v019=UBERON:0002423;2.20e-13;25!UBERON:0002294;1.50e-08;7!UBERON:0001173;1.50e-08;7!UBERON:0002107;5.87e-07;19!UBERON:0006925;5.87e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0009497,2.07e-13,25;UBERON:0000015,2.07e-13,25;UBERON:0002423,2.07e-13,25;UBERON:0006235,2.07e-13,25;UBERON:0004161,2.07e-13,25;UBERON:0008835,4.95e-10,22;UBERON:0003894,4.95e-10,22;UBERON:0005911,1.12e-09,82;UBERON:0009854,1.32e-09,23;UBERON:0007499,7.44e-09,25;UBERON:0003929,1.19e-08,54;UBERON:0009856,1.60e-08,26;UBERON:0001007,5.61e-08,145;UBERON:0001555,5.61e-08,145;UBERON:0007026,5.61e-08,145;UBERON:0004119,4.04e-07,160;UBERON:0000925,4.04e-07,160;UBERON:0006595,4.04e-07,160;UBERON:0002107,5.63e-07,19;UBERON:0006925,5.63e-07,19;UBERON:0008836,5.63e-07,19;UBERON:0002294,7.64e-07,9;UBERON:0001173,7.64e-07,9;UBERON:0004912,7.64e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86261773342101,7.08947888017685,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,3.20810352485256,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,1.25314822272926,0,0.295930216910801,0,0,0,0,0,0,0,0,1.0241410345695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,1.22206028986725,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0.391102765469606,0,3.84215390530835,0,0.576361668616424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.412079291905832,0.471824806979294,0,0,0,0,0,0,0,0,0,0,2.0126081255956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,0,0,0,1.02652102730598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3446 | |||
|description=CAGE_peak_at_chr14:65406411..65406422,- | |||
|id=chr14:65406411..65406422,- | |||
|ontology_enrichment_celltype=CL:0000223!1.93e-18!59;CL:0002076!2.97e-12!43;CL:0002621!7.41e-11!3;CL:0002231!9.73e-11!3;CL:0002251!3.12e-09!21;CL:0000066!4.82e-09!254;CL:0000181!1.90e-07!12;CL:0000417!1.90e-07!12;CL:0000668!1.90e-07!12;CL:0000414!1.90e-07!12;CL:0000412!1.90e-07!12;CL:0000182!1.90e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002553;6.21e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,6.22e-15,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.63e-15;1!UBERON:0009497;9.05e-10;13!UBERON:0001041;2.57e-07;30 | |||
|ontology_enrichment_disease=DOID:305!1.29e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:3151;9.36e-15;1!DOID:3149;9.36e-15;1!DOID:1749;4.94e-09;14!DOID:3451;5.01e-08;2!DOID:4159;5.01e-08;2!DOID:0060122;5.01e-08;2!DOID:3493;7.03e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,9.36e-15,1;DOID:3149,9.36e-15,1;DOID:1749,5.53e-09,14;DOID:3451,5.02e-08,2;DOID:4159,5.02e-08,2;DOID:0060122,5.02e-08,2;DOID:3493,5.37e-08,2;DOID:305,3.55e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.82e-23!155;UBERON:0001555!3.82e-23!155;UBERON:0007026!3.82e-23!155;UBERON:0004119!7.97e-22!169;UBERON:0000925!7.97e-22!169;UBERON:0006595!7.97e-22!169;UBERON:0004921!4.67e-18!129;UBERON:0004185!4.67e-18!129;UBERON:0000161!1.31e-15!35;UBERON:0003929!1.15e-14!54;UBERON:0000077!4.62e-14!130;UBERON:0005911!2.80e-12!82;UBERON:0000166!2.05e-11!21;UBERON:0001949!7.41e-11!3;UBERON:0003101!9.35e-11!22;UBERON:0000079!9.35e-11!22;UBERON:0009497!2.53e-10!25;UBERON:0000015!2.53e-10!25;UBERON:0002423!2.53e-10!25;UBERON:0006235!2.53e-10!25;UBERON:0004161!2.53e-10!25;UBERON:0001041!1.93e-09!98;UBERON:0009854!5.75e-09!23;UBERON:0000165!3.69e-08!28;UBERON:0000930!3.69e-08!28;UBERON:0000466!4.61e-08!126;UBERON:0009856!9.04e-08!26;UBERON:0003135!1.96e-07!11;UBERON:0008835!2.75e-07!22;UBERON:0003894!2.75e-07!22;UBERON:0001004!3.59e-07!72;UBERON:0000473!8.72e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.20e-13;25!UBERON:0002294;1.50e-08;7!UBERON:0001173;1.50e-08;7!UBERON:0002107;5.87e-07;19!UBERON:0006925;5.87e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,2.07e-13,25;UBERON:0000015,2.07e-13,25;UBERON:0002423,2.07e-13,25;UBERON:0006235,2.07e-13,25;UBERON:0004161,2.07e-13,25;UBERON:0008835,4.95e-10,22;UBERON:0003894,4.95e-10,22;UBERON:0005911,1.12e-09,82;UBERON:0009854,1.32e-09,23;UBERON:0007499,7.44e-09,25;UBERON:0003929,1.19e-08,54;UBERON:0009856,1.60e-08,26;UBERON:0001007,5.61e-08,145;UBERON:0001555,5.61e-08,145;UBERON:0007026,5.61e-08,145;UBERON:0004119,4.04e-07,160;UBERON:0000925,4.04e-07,160;UBERON:0006595,4.04e-07,160;UBERON:0002107,5.63e-07,19;UBERON:0006925,5.63e-07,19;UBERON:0008836,5.63e-07,19;UBERON:0002294,7.64e-07,9;UBERON:0001173,7.64e-07,9;UBERON:0004912,7.64e-07,9 | |||
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|short_description=p@chr14:65406411..65406422,- | |||
}} |
Revision as of 05:10, 11 September 2013
Short description: | p@chr14:65406411..65406422, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:65406411..65406422, - |
Coexpression cluster: | C3446_Hepatocyte_bronchial_gall_signet_Prostate_smallcell_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 6.22e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 2.07e-13 | 25 |
anatomical boundary | 2.07e-13 | 25 |
hepatobiliary system | 2.07e-13 | 25 |
foregut-midgut junction | 2.07e-13 | 25 |
septum transversum | 2.07e-13 | 25 |
hepatic diverticulum | 4.95e-10 | 22 |
liver primordium | 4.95e-10 | 22 |
endo-epithelium | 1.12e-09 | 82 |
digestive tract diverticulum | 1.32e-09 | 23 |
epithelial sac | 7.44e-09 | 25 |
gut epithelium | 1.19e-08 | 54 |
sac | 1.60e-08 | 26 |
digestive system | 5.61e-08 | 145 |
digestive tract | 5.61e-08 | 145 |
primitive gut | 5.61e-08 | 145 |
endoderm-derived structure | 4.04e-07 | 160 |
endoderm | 4.04e-07 | 160 |
presumptive endoderm | 4.04e-07 | 160 |
liver | 5.63e-07 | 19 |
digestive gland | 5.63e-07 | 19 |
liver bud | 5.63e-07 | 19 |
biliary system | 7.64e-07 | 9 |
biliary tree | 7.64e-07 | 9 |
biliary bud | 7.64e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.36e-15 | 1 |
keratoacanthoma | 9.36e-15 | 1 |
squamous cell carcinoma | 5.53e-09 | 14 |
skin carcinoma | 5.02e-08 | 2 |
skin cancer | 5.02e-08 | 2 |
integumentary system cancer | 5.02e-08 | 2 |
signet ring cell adenocarcinoma | 5.37e-08 | 2 |
carcinoma | 3.55e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.