FFCP PHASE1:Hg19::chr14:70656139..70656147,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6547|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11070|TSSclassifier=S|UniProt=Q96QG2,P57103,Q96QG1|association_with_transcript=-352bp_to_ENST00000356921,ENST00000357887,ENST00000381269,ENST00000494208,NM_033262,NM_058240,NM_182932,NM_183002,uc001xlw.2,uc001xlx.2,uc001xly.2,uc001xlz.2,uc010ara.2_5end|coexpression_cluster_id=C216|description=CAGE_peak_9_at_SLC8A3_5end|id=chr14:70656139..70656147,-|ontology_enrichment_celltype=CL:0002274!1.94e-42!5;CL:0000457!1.94e-42!5;CL:0002191!1.94e-42!5;CL:0000097!1.94e-42!5;CL:0000831!1.94e-42!5;CL:0002028!1.94e-42!5;CL:0000163!1.42e-23!9;CL:0000062!1.60e-07!11;CL:0000375!1.60e-07!11;CL:0000335!1.60e-07!11|ontology_enrichment_celltype_v019=CL:0000097;1.60e-14;5!CL:0000062;1.04e-08;9!CL:0000163;1.12e-08;9|ontology_enrichment_celltype_v019_2=CL:0000097,1.60e-14,5;CL:0002028,1.60e-14,5;CL:0000163,1.12e-08,9;CL:0000062,2.32e-07,11;CL:0000375,2.32e-07,11;CL:0000335,2.32e-07,11|ontology_enrichment_development_v019=CL:0000335;2.32e-07;11|ontology_enrichment_disease=DOID:630!9.70e-10!1;DOID:0050177!9.70e-10!1;DOID:0050427!9.70e-10!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002336!1.76e-09!1;UBERON:0001018!1.76e-09!1;UBERON:0002473!1.76e-09!1;UBERON:0005340!1.76e-09!1;UBERON:0002316!1.76e-09!1;UBERON:0003544!1.76e-09!1;UBERON:0001020!1.76e-09!1;UBERON:0005970!1.76e-09!1;UBERON:0002437!1.76e-09!1;UBERON:0002902!2.46e-09!1;UBERON:0009899!2.46e-09!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94130590316755,0.264145302039678,0.621984346622316,0.720599767084807,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539124056983409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,6.36531910772079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21700790611806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233|short_description=p9@SLC8A3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6547 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11070 | |||
|TSSclassifier=S | |||
|UniProt=Q96QG2,P57103,Q96QG1 | |||
|association_with_transcript=-352bp_to_ENST00000356921,ENST00000357887,ENST00000381269,ENST00000494208,NM_033262,NM_058240,NM_182932,NM_183002,uc001xlw.2,uc001xlx.2,uc001xly.2,uc001xlz.2,uc010ara.2_5end | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_9_at_SLC8A3_5end | |||
|id=chr14:70656139..70656147,- | |||
|ontology_enrichment_celltype=CL:0002274!1.94e-42!5;CL:0000457!1.94e-42!5;CL:0002191!1.94e-42!5;CL:0000097!1.94e-42!5;CL:0000831!1.94e-42!5;CL:0002028!1.94e-42!5;CL:0000163!1.42e-23!9;CL:0000062!1.60e-07!11;CL:0000375!1.60e-07!11;CL:0000335!1.60e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.60e-14;5!CL:0000062;1.04e-08;9!CL:0000163;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.60e-14,5;CL:0002028,1.60e-14,5;CL:0000163,1.12e-08,9;CL:0000062,2.32e-07,11;CL:0000375,2.32e-07,11;CL:0000335,2.32e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.32e-07;11 | |||
|ontology_enrichment_disease=DOID:630!9.70e-10!1;DOID:0050177!9.70e-10!1;DOID:0050427!9.70e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002336!1.76e-09!1;UBERON:0001018!1.76e-09!1;UBERON:0002473!1.76e-09!1;UBERON:0005340!1.76e-09!1;UBERON:0002316!1.76e-09!1;UBERON:0003544!1.76e-09!1;UBERON:0001020!1.76e-09!1;UBERON:0005970!1.76e-09!1;UBERON:0002437!1.76e-09!1;UBERON:0002902!2.46e-09!1;UBERON:0009899!2.46e-09!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94130590316755,0.264145302039678,0.621984346622316,0.720599767084807,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539124056983409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,6.36531910772079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21700790611806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p9@SLC8A3 | |||
}} |
Revision as of 05:22, 11 September 2013
Short description: | p9@SLC8A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SLC8A3_5end |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | -352bp_to_ENST00000356921, ENST00000357887, ENST00000381269, ENST00000494208, NM_033262, NM_058240, NM_182932, NM_183002, uc001xlw.2, uc001xlx.2, uc001xly.2, uc001xlz.2, uc010ara.2_5end |
EntrezGene: | SLC8A3 |
HGNC: | 11070 |
UniProt: | Q96QG2P57103Q96QG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.60e-14 | 5 |
basophil mast progenitor cell | 1.60e-14 | 5 |
endocrine cell | 1.12e-08 | 9 |
osteoblast | 2.32e-07 | 11 |
osteoprogenitor cell | 2.32e-07 | 11 |
mesenchyme condensation cell | 2.32e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.